Salvelinus namaycush (lake trout): 120051325
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Entry
120051325 CDS
T07522
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
snh04054
]
120051325
Pattern recognition receptors [BR:
snh04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
120051325
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GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
TIR_2
LRR_9
LRR_NXF1-5
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
120051325
NCBI-ProteinID:
XP_038854071
UniProt:
A0A8U0UJL3
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Position
Sna7:complement(48231285..48235371)
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AA seq
972 aa
AA seq
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MTLKITMPGKQSGSTFSQLRLFLCFLMYCWGLADPACGYFLKNCTIRGNLSDPSDMKVLC
YNRNLEVIPIAIPRKVSNLDLAMNNISKIEKLDFKGLSNLKFLNMSRNQISQVDDGALGH
LEALQELGLAHNRLTTLSDHLFQGLANLSLLHLDNNLIATISSSSFQLLSSLKTVNLTNN
NLENMKEVQPIVQLPHLHELYIGSNRFTSFQSQEISNTSIELRLLDLSRNPLGIFRITAD
VLPYLEVLDIAYCGQLGHMEWDVLDRSFLRNVNRLNLSGIEMSFERMGMVLQTVNSSLVH
LRLHDLVNSSRLKIKALTDIACRIPTLSVLRLEYNNIGNLSEEFLQSCKHLTEVDISDTG
LTQLSDFSFRSIEQLSALILGHNRLSFMPKATRNLPTLKILDLSFNIINKLGCSDFSNLT
ELTQLIIFHNQIPNLPACVFQDLKELRILKMGSNKILTLNDAFMNALHKLEMMNLAGNKL
SSIRKGEFKSLTSLKTLLLFDNQIASMEDGAFEGLVNLTELNLGSNKITQIDIRNTVLTG
LPLLKSLDISCNYITYVNDDKLNPPPFSHLTSLENLRIFSQRHKGLSHLPINFLEGLKYL
LSFQAGSLNIKELYPGTFIYTPRLWFLDISKNEFTALTPKLFHPIPRLNSLYLSKARLQS
LDFLIGANLSRVTLLQVSKNDITVVNETVLRSLPALTYLDMQDNAFTCGCSDAWFVQWIE
SDNQTQVVGAGEFTCNYPADLKDTKLLDVELQFCIVHLGLYYYISTTCLVLLTLIASFAY
HFLKWQVIYGYYLFLAFLYDTKQRNKHTPHGCQYDAFISYNAHDEPWVLRELLPELEGEQ
GWKLCLHHRDFQPGKPIIDNIMDGIYGSRKTICVISRRYLESEWCSREIQVASFRLFDEQ
KDVLILVFLEEIPTHQLSPYHRMRKLVKRRTYLSWPRAGEHTGVFWQQLRLALETKDGSS
EENPILSGVQAL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgacactcaagataaccatgccaggaaaacaaagtgggtctacattctctcagctgaga
ctctttctttgtttcctgatgtattgctggggtctagctgatccagcatgtgggtacttc
ctgaaaaactgcacaatccggggtaatctcagtgacccctctgacatgaaagtactctgt
tataacaggaatcttgaagtcatacctatagctattccgcggaaagtaagcaatttagac
ttggccatgaataacatttccaagatcgaaaagttggattttaaaggcctatcaaaccta
aaatttctaaacatgtccagaaaccagatctctcaagtggacgatggggctcttggacac
ctagaggctcttcaggaactgggtttggctcataacagactcacaaccctgtcagaccat
ttgtttcagggcctggccaacctctccctgctacatctggacaacaacctcattgcaacc
atcagctcctcatcctttcagcttctctccagtttgaagacagtgaatttaaccaataac
aaccttgagaatatgaaggaagttcagcccatcgtacaattaccacacttacatgagttg
tacattgggagcaacagattcacctctttccagtcacaggaaatatcaaacacgtctata
gagctgaggctgttggatttatcccggaatccattgggaatcttcaggatcacggcagat
gttcttccttaccttgaggtgttagacatcgcctactgtggccaacttggacacatggaa
tgggatgtgctggacaggtcttttctgagaaacgtcaatcgtctcaacttgagcggcatt
gagatgtctttcgagaggatgggtatggtactgcagactgtcaactcctcattagtccat
ctgagattgcatgacctcgtcaacagctcaaggctcaagatcaaggctctcactgatatt
gcctgccgtatacctacactcagtgtgctccggctagaatataacaacataggtaatctc
tctgaggaatttctgcagtcatgtaaacacctgacagaagtggacatatcagatactggt
cttactcagctgtctgacttttcattcagatcaatagagcaattaagtgctttgatactg
ggccacaataggctttctttcatgccaaaggccacaagaaatctaccgacactgaagatc
ctggatctcagcttcaatatcatcaataaactaggctgctcagatttctccaatcttaca
gaactcacacaactcattattttccacaatcaaatccccaaccttccggcatgtgttttc
caggatttgaaagaattaaggatccttaaaatgggatcaaacaaaatcctgaccttgaat
gatgcattcatgaatgctttgcacaaacttgagatgatgaacttggcaggcaataaactg
agctctatcagaaaaggagagtttaaaagcttaacatcactcaagactttacttttattt
gacaatcagattgccagcatggaagatggagcctttgagggattggtcaaccttacagaa
cttaacctgggctcaaataagatcactcaaatagacataagaaatactgtgctcacggga
ctcccactcttaaaaagtcttgatatatcctgtaattacatcacatatgtaaatgatgat
aaactaaaccctccacccttctctcatctgacatctctggagaacctcaggatatttagt
cagcgtcacaagggattgtctcatctaccaatcaactttctggaaggactgaaatattta
ttgtcattccaggcagggagtcttaatattaaggagctgtacccaggcacattcatttac
acaccccggttgtggtttcttgatatcagtaagaatgagttcacagccctcactccaaag
ctgtttcacccaatcccaaggctcaacagcctgtacctgtccaaagcccgacttcagtcc
ttagatttcctcataggagcaaacctcagtagagtcactttactgcaggtgagcaagaac
gacataacagtagtcaatgagacagtgttgcgttctctccctgccttgacatacctggac
atgcaagataatgctttcacctgtggctgcagcgatgcttggtttgtccagtggatagag
agcgacaaccaaacacaagttgttggtgcaggagaatttacctgcaactatcctgccgat
ctaaaggacaccaagctgttggatgttgagcttcagttctgtatagtacacttaggactt
tactactacatctctaccacttgtctggtcctcctcaccctgatagcatcctttgcctac
cacttcctgaaatggcaggtaatttacggctattacctcttcctggctttcctctatgac
accaagcaaaggaataagcacacgcctcatggctgtcagtacgatgccttcatctcctac
aacgcccacgatgagccctgggtcctgagggagcttctgccagagctggagggagagcag
ggctggaagctgtgtctccaccaccgggacttccagccaggcaaaccaatcatagacaac
attatggacggcatctacggaagccgcaagaccatctgtgtgatcagccgccgctacctg
gagagtgagtggtgctcccgggagatccaggtggccagcttccggctctttgatgagcag
aaggacgtcctgattctggtgttcctggaggagatccctacccaccagctgtcaccctac
caccggatgaggaagctggtgaagagacgcacctacttgagttggcccagagctggggag
cacactggggtcttctggcagcaactacggctggctttagagaccaaggacggctcttct
gaggaaaatcccatcctctctggggtgcaggctctgtga
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