Salvelinus namaycush (lake trout): 120051327
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Entry
120051327 CDS
T07522
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
snh04054
]
120051327
Pattern recognition receptors [BR:
snh04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
120051327
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_9
TIR_2
LRR_5
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
120051327
NCBI-ProteinID:
XP_038854073
UniProt:
A0A8U0UIP0
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Position
Sna7:complement(48272891..48276725)
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AA seq
969 aa
AA seq
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MTLKITMPGKQSGSTFSQLRLFLCFLMYCWGLADPACGYFLKNCTIRGNLSDPSDMKVLC
EKRNLEVTPIDIPQKVCVLDVAMNNISKIGTLDFKGLSNLKILNMSRNQISQVDDGSLGH
LEALQELGLAHNRLTTLSDHLFQGLANLSLLHLDNNLIATISSSSFQLLSSLKTVNLTKN
NLENMKEVQPIVQLPHLHELYIGSNRFTSFQSQEISNTSIELRLLDLSRNPLGIFRITAD
VLPYLEVLDIAYCGQLGHMEWDVLDRSFLRNVKRLNLSGIEMSFERMGMVLQTVNSSLVH
LRLYDISEERVKALTDIACQIPTLSLLRLHHNNIRVLSKEFLQSCKQLTEMDVGDNNINQ
LSEFLFRSMEQLSTLKLGHNSLSSVPNATRSLPTLKILDLSFNIIHKLGCSDFANLTGLT
QLILFHNQISKLPGCVFQDLKELRILKLGSNKILTLNDAFMSSLHKLEFLSMSYNKLSSI
SKGDFIGLASLKTLLLFDNQIASLEDGAFEGLVNLTELRLQSNKITQIDIRNTVLTGLPR
LRTLDISCNYITYVNDDKLNPPPFSHLTSLENLQIHSQRHKGLSHLPINFLEGLKSLLAF
KAGNLNIKDLHPNTFIHTPRLWFLDVSKNEFTALTPKLFHPTPRLNRMYLSKARLQSLDF
LIGANLSRVTFLQVSKNDITVVNETVLDSLPALTYLDMQDNAFTCGCSDAWFVQWMESNN
QTQVVGAGEFTCNYPADLKDTKLLDVELQFCIVYLGLHFYISTTCLVILTLIASFAYHFL
KWQVIYGYYLFLAFLYDTKLRNKHTPHGCQYDAFISYNAYDEPWVLRELLPELEGEQGWK
LCLHHRDFQPGKPIIDNIMDGIYGSRKTICVISRRYLESEWCSREIQVASFRLFDEQKDV
LILVFLEEIPSHQLSPYHRMRKLVKRRTYLSWPRAGEQPGVFWQQLRLALETKDGPAEEN
PILSGVQAL
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgacactcaagataaccatgccaggaaaacaaagtgggtctacattctctcagctgaga
ctctttctttgtttcctgatgtattgctggggtctagctgatccagcatgtgggtacttc
ctgaaaaactgcacaatccggggtaatctcagtgacccctctgacatgaaagtactctgt
gaaaagaggaacctagaagtcacacctatagacattccacagaaagtatgcgttttagat
gtggccatgaataacatttccaaaattggaacgttggattttaaaggcctatcaaacctc
aaaattctaaacatgtcaagaaaccagatctctcaagtggacgatgggtctctcggacac
ctagaggctcttcaggagctgggtctggctcataacagactcacaaccctgtcagaccat
ttatttcagggcctggccaacctctccctgctacatctggacaacaacctcattgcaacc
atcagctcctcatcctttcagcttctctccagtttgaagacagtgaatttaaccaagaac
aaccttgagaatatgaaggaagttcagcccatcgtacaattaccacacttacatgagttg
tacattgggagcaacagattcacctctttccagtcacaagaaatatcaaacacgtctata
gagctgaggctgttggatttatcccggaatccattgggaatcttcaggatcacggcagat
gttcttccttaccttgaggtgttagacatcgcctactgtggccaacttggacacatggaa
tgggatgtgctggacaggtcttttctgagaaacgtcaaacgtctgaacctgagcggcatt
gagatgtctttcgagaggatgggtatggtactgcagactgtcaactcatcattagtccat
ctgagactgtatgacattagtgaagagagggtcaaggctctcactgatattgcctgccaa
atacccacacttagcttgctccgactgcatcataacaacatacgtgttctctctaaggaa
tttctgcagtcatgtaaacagttgaccgaaatggacgtaggtgataataatattaatcag
ctgtctgagtttttattcagatcaatggagcaattaagtactttgaaactgggccacaac
agcctttcttccgtgccaaatgccacaagaagtctaccgacactgaagatcctggatctg
agcttcaatatcatccataaactaggctgctctgattttgccaatcttacaggactcaca
caactcattcttttccacaatcaaatctccaaactcccaggatgtgttttccaggatttg
aaagaattaaggatccttaaactgggatcaaacaaaatcctgaccttaaatgatgcattc
atgagtagtttgcacaaactagaatttttgtcgatgtcatacaataagctgagctcaatc
tctaaaggagactttataggcttagcatcactcaagactctgcttttatttgacaatcag
attgctagtcttgaagatggagcttttgagggattggtgaatctaacagaacttagacta
cagtcaaataagatcactcaaatagacataagaaatactgtgctcacgggacttccacgc
ttaagaactcttgatatatcctgtaattacatcacatatgtaaatgatgataaactaaac
cctccacccttctctcatctgacatctctggagaacctgcagatacatagtcagcgtcac
aagggactgtctcatctacctatcaacttccttgaaggtctgaaatctttattggcattc
aaggcagggaatctcaatattaaggacctgcacccaaacacatttattcacacaccacgg
ttgtggttccttgatgtcagtaagaatgagttcacagccctcactccaaagctgtttcac
ccaaccccaaggctcaacagaatgtacctgtccaaagccagacttcagtccttagatttc
ctcataggagcaaacctcagtagagtcactttcttgcaggtgagcaagaacgatataaca
gtagtcaatgagacagtgttggattctctccctgccttgacatacctggacatgcaagat
aatgctttcacctgtggctgcagcgatgcttggtttgtccagtggatggagagcaacaac
caaacacaagttgttggtgcaggagaatttacctgcaactatcctgccgatctaaaggac
accaagctgttggatgttgagcttcagttctgtatagtatacttaggacttcacttctac
atctctaccacttgcctggtcattctcaccctgatagcatcctttgcctaccacttcctg
aaatggcaggtaatttacggctattacctcttcctggctttcctctatgacaccaagcta
aggaataagcacacgcctcatggctgtcagtacgatgccttcatctcctacaatgcctac
gatgagccctgggtcctgagggagcttctgccagagctggagggagagcagggctggaag
ctgtgtctccaccaccgggacttccagccaggcaaaccaatcatagacaacattatggac
ggcatctacggaagccgcaagaccatctgtgtaatcagccgccgctacctggagagtgag
tggtgctcccgggagatccaggtggccagcttccggctctttgatgagcagaaggacgtc
ctgattctggtgttcctggaggagatcccttcccaccagctgtcaccctaccaccggatg
aggaagctagtgaagagacgcacatacctgagctggcccagagctggggagcaacccggg
gtcttctggcagcaactacggctggctttagagaccaaggacggccctgctgaggaaaat
cccatcctctctggtgtgcaggctctgtga
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