Salvelinus namaycush (lake trout): 120051328
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Entry
120051328 CDS
T07522
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
snh04054
]
120051328
Pattern recognition receptors [BR:
snh04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
120051328
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_5
LRR_9
LRR_Zer-1
LRR_NXF1-5
DHU1_N
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
120051328
NCBI-ProteinID:
XP_038854074
UniProt:
A0A8U0R5V1
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Position
Sna7:complement(48281706..48284669)
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AA seq
711 aa
AA seq
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MWLDRSFLSNVNRLNLSGIEMSFERMGMVLQTVNSSLVHLRLHDLVNGSRLKIKALTDIA
CRIPTLSVLRLEYNNIGNLSEEFLQSCKHLTEVDISNTGLTQLSDFSFRSIEQLSALKLG
HNRLSSVPKATKNLPTLKILDLSFNIINKLGCSDFSNLTELTQLIIFHNQIPNLPGCVFQ
DLKELRILKMGSNKILTLNDAFMNTLHKLETLNLASNKLSSIRKGEFKSLTSLKTLLLFD
NQIASMEDGAFEGLVNLTELKLGSNKITQIGIRNTVLTGLPLLKSLDISCNYITYVNDDK
LNPPPFSHLTSLENLRIFSQRHKGLSHLPINFLEGLKSLLSFQAGSLNIKELYPGTFIYT
PRLWFLDISKNEFTALTPKLFHPIPRLNSLYLTKARIQSLDFLIGANLSRVTLLQVSKND
ITVVNETVLRSLPALTYLDMQDNAFTCGCSDAWFVQWMESDNQTQVVGAGEFTCNYPADL
KDTKLLDVELQFCIVRLGLYYYISTTCLVLLTLIASFAYHFLKWQVIYSYYLFLAFLYDT
KQRNKHTPHGCQYDAFISYNAHDEPWVLRELLPELEGEQGWKLCLHHRDFQPGKPIIDNI
MDGIYGSRKTICVISRRYLESEWCSREIQVASFRLFDEQKDVLILVFLEEIPTHQLSPYH
RMRKLVKRRTYLSWPRAGVHTGVFWQQLRLALETKDGPAEENPILSGVQAL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggacaggtcttttctgagcaacgtcaatcgtctcaacttgagcggcattgag
atgtctttcgagaggatgggtatggtgctgcagactgtcaactcatcattagtccatctg
agattgcatgacctcgtcaacggctcaaggctcaagatcaaggctctcactgatattgcc
tgccgtatacctacactcagtgtgctccggctggaatataacaacataggtaatctctct
gaggaatttctacagtcatgtaaacacctgacagaagtggacatatcaaatactggtctt
actcagctgtctgacttttcattcagatcaatagagcaattaagtgctttgaaactgggc
cacaataggctttcttccgtgccaaaggccacaaaaaatctaccgacactgaagatcctg
gatctcagcttcaatatcatcaataaactaggctgctcagatttctccaatcttacagaa
ctcacacaactcattattttccacaatcaaatccccaaccttccgggatgtgttttccag
gatttgaaagaattaaggatccttaaaatgggatcaaacaaaatcctgaccttgaatgat
gccttcatgaatactttgcacaaacttgagactttgaacttggcaagcaataaactgagc
tctatcagaaaaggagagtttaaaagcttaacatcactcaagactttacttttatttgac
aatcagattgccagcatggaagatggagcctttgagggattggtcaaccttacagaactt
aaactgggctcaaataagatcactcaaataggcatacgaaatactgtgctcacaggactc
ccactcttaaaaagtcttgatatatcctgtaattacatcacatatgtaaatgatgataaa
ctaaaccctccacccttctctcatctgacatctctggagaacctcaggatatttagtcag
cgtcacaagggactgtctcatctacctatcaacttccttgaaggactgaaatctttattg
tcattccaggcagggagtcttaatattaaggagctgtacccaggcacattcatttacaca
ccccggttgtggttccttgatatcagtaagaatgagttcacagccctcactccaaagctg
tttcacccaatcccaaggctcaacagcctgtacctgaccaaagcccgaattcagtcctta
gatttcctcataggagcaaacctcagtagagtcactttattgcaggtgagcaagaacgac
ataacagtagtcaatgagacagtgttgcgttctctccctgccttgacatacctggacatg
caagataatgctttcacctgtggctgcagcgatgcttggtttgtccagtggatggagagc
gacaaccaaacacaagttgttggtgcaggagaatttacttgcaactatcctgccgatcta
aaggacaccaagctgttggatgttgagcttcagttctgtatagtacgcttaggactttac
tactacatctctaccacttgtctggtcctcctcaccctgatagcatcctttgcctaccac
ttcctgaaatggcaggtaatttacagctattacctcttcctggctttcctctatgacacc
aagcaaaggaataagcacacgcctcatggctgtcagtacgatgccttcatctcctacaac
gcccacgatgagccctgggtcctgagggagcttctgccagagctggagggagagcagggc
tggaagctgtgtctccaccaccgggacttccagccaggcaaaccaatcatagacaacatt
atggacggcatctacggaagccgcaagaccatctgtgtgatcagccgccgctacctggag
agtgagtggtgctcccgggagatccaggtggccagcttccggctctttgatgagcagaag
gacgtcctgattctggtgttcctggaggagatccctacccaccagctgtcaccctaccac
cggatgaggaagctggtgaagagacgcacctacttgagttggcccagagctggggtgcac
actggggtcttctggcagcaactacggctggctttagagaccaaggacggccctgctgag
gaaaatcccatcctctctggtgtgcaggctctgtga
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