Salvelinus namaycush (lake trout): 120051338
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Entry
120051338 CDS
T07522
Name
(RefSeq) transformer-2 protein homolog beta-like
KO
K12897
transformer-2 protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120051338
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120051338
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120051338
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120051338
Spliceosome [BR:
snh03041
]
Common components
Common spliceosomal components
SR proteins
120051338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
FMP27-BLTP2_C
Motif
Other DBs
NCBI-GeneID:
120051338
NCBI-ProteinID:
XP_038854090
UniProt:
A0A8U0UIG5
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All DBs
Position
Sna7:complement(48623796..48631021)
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AA seq
298 aa
AA seq
DB search
MSDNEKDFGERDSRSASRSVSPRASGKSASRSPAHSPARSKDGSRHSRSKSHSRSRSKSR
SRSHRSSRRHYSRSRSRSHRRRSRSRSRSGEYRRRRSHSHSPMSNRRRHIGNRANPDPNC
CLGVFGLSLYTTERDLRDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFEVREDANEAKDR
ANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGGDGSSGGGGGSGGPSSSSSRRSSK
DYDRGGERGYDKGYDRGYDRYDDRECYRSYRRRSPSPYYSRGAYRSRSRSRSYSPRHY
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaacgaaaaggattttggcgagcgggactcgcggtccgcttccaggagtgtg
agcccaagggcttctgggaagtctgccagccgctccccggcccattccccagcccgctcc
aaagatggctccagacactccaggtctaagtcccattcccgatctcgctccaagtccagg
tctcgttcccacagaagctcccgcaggcattattcccgctctcgctcccgttcccaccgc
cgccgttcccgtagccgatcccgaagcggggaatatcgccgccgtcggagccacagccac
tcacccatgtccaaccgccgcaggcacattggcaaccgggccaacccggacccgaactgc
tgcctgggtgtgtttggtctgagcctgtacaccacagagagagatctgagagacgtgttc
tccaagtacggccccctggctgacgtcagcatcgtctacgaccagcagtcacgacgctcc
cgcggcttcgccttcgtctacttcgaagtccgagaggacgccaatgaggctaaggacaga
gctaatggaatggagttggatggacggaggatcagggtcgatttctccatcaccaaacga
ccacacactcctacccctgggatatatatgggacggcccacatatggcggcgacggcagc
agcggtggaggaggaggaagtggcgggcccagctcaagctcatctcgccgtagctcgaag
gattacgaccgcggcggtgaacgtggttacgacaaaggctatgaccgcggctacgatcgc
tatgacgaccgagagtgctacaggtcctacaggcgcaggtctccgtccccgtactacagt
cgaggggcctaccgatctcgctcacgctcgcgatcttactccccacgccactactga
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