Salvelinus namaycush (lake trout): 120051378
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Entry
120051378 CDS
T07522
Name
(RefSeq) cohesin subunit SA-1-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120051378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120051378
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120051378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
Cnd3
Motif
Other DBs
NCBI-GeneID:
120051378
NCBI-ProteinID:
XP_038854146
UniProt:
A0A8U0R2X3
LinkDB
All DBs
Position
Sna7:50294407..50333524
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AA seq
1262 aa
AA seq
DB search
MITSELPVLQDSSNESGAADTVSLSVSVSELEDPTDTKGKKKRGRPGRPPAANKKPRKSP
AEKATGGAKGRKANGVPQTNGEGGDPVTLFEVVRMGKSAMQSVVDDWIESYKQDRDIALL
DLINFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPLWKKFRYNF
CEFICVLIRQCQYSIIYDEYLMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVAL
NLSIHQDNTQRQYEAERNKMAGKRANEKLELLLQKRKELQENQDEIENMMNSIFKGIFVH
RYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQNLY
TNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLITLILQGSEDALSNEDCENVYH
LVYSAHRPVAVAAGEFLHRKLFSRHDPQAEEELAKRRGRSSPNGNLLRMLVLFFLESELH
EHAAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEVLSDRQENSLIELMVCTIRQAAE
AHPPVGRGTGKRVLTAKERKTQIDDKNKLTEHFIMALPMLLSKYQADSEKVANLLQIPMF
FDLDVYSAGRMEKHLDALLKQIRLVVEKHIETDVLEACSKTYSILCSEEYTIMNRVDIAR
SQLIDEMTDRFTHSVEDLLQEAEEADDDDIYNVLSTLKRLTAFHNAHDLTRWDLFGSCYR
LLKAGIEQGAMPEQIAVQALQCSHYSILWQLVKITEGTPSKEDLVALRRVVKSFLAVCQQ
CLSNVNTPVKEQAFMLLCDLLMVFSHQLVSGGREGLEALVFNPDSTLQNELLTFILDHVF
IDQDDENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMPAAADIFKHYMKYYN
DYGDIIKETLSKTRQSDKILCAKTLILSLQQLFNELLQDQGPTLDRTSSHVSGIKELARR
FALTFGLDQIKTREAVATLHKDGIEFAFKYQNPHGAEFPPPNLAFLEVLSEFSSKLLRQD
KKTVHSYLEKFMSESMSERREDVWLPLISYRNSLLTGGEDGDRMSVTSGASSKTSSIRSK
KGRTPIHKSKRIEEESSVEASWLRGNDSLQTPGALTTPQLTSTVLRENPRQAADTHLPDH
DSEPGSENDYVHNPQMQMSWLGQQKMEDSRKDRTAMNYMKARNQTVRQTVRGLMEDDAEP
IFEDVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAMIEDESGFTMP
MF
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctctgagctgcctgtcctacaggactcgtccaatgagagcggagcggcagac
acagtgagtctgagtgtgagtgtgagtgagctggaggacccgacagacactaaaggcaag
aagaagagagggaggcctggcagaccaccagcagccaataagaagcctcggaagtcccca
gcggagaaggctacaggcggtgctaaagggaggaaggccaatggggtccctcagaccaac
ggcgagggaggagaccccgtcactctgtttgaggtggtcagaatgggaaagagtgccatg
cagtctgtggttgatgactggatcgagtcgtacaagcaggacagagacatcgccttactg
gacctcatcaacttctttatccagtgttctggctgcaaaggcaccgtgcgcatcgagatg
ttccggaacatgcagaacgctgagatcatcaggaagatgacagaggagtttgacgaggac
agtggggactaccctctcaccatgcccgggccgctgtggaagaagttccgctacaacttc
tgtgagttcatctgcgtattgatacgtcagtgccagtacagcatcatctatgatgagtac
ctcatggacacggtcatatccctcctcacgggactatctgactcacaggtcagagctttc
agacacaccagcacactggcagcgatgaagttgatgacagcgttggtgaacgtagcgttg
aacctcagtatccaccaggacaacacccagagacagtatgaggctgagaggaacaagatg
gccggaaaacgagccaatgagaagctagagctgctgctgcagaagaggaaggagctccag
gagaaccaggatgagattgagaacatgatgaactctatcttcaaaggaatctttgtccac
cgctacagggatgctatagctgagatcagagctatctgtattgaggagattggagtttgg
atgaagatgtactctgacgccttcctcaacgacagctacctgaaatatgtaggatggacc
ttacacgaccggcaaggcgaggtacgtctgaagtgtttgaaggccctccagaacctgtac
accaacagagagctgtttcccaaactggagctgttcaccaaccgcttcaaggaccgcatc
gtgtccatgactctggataaggagtatgacgtggctgtggaggctattagactgatcacg
ctcatcctgcagggcagcgaggatgcgttgtccaatgaggactgcgagaatgtctaccac
ctggtttactccgcccacagacctgtcgccgtggcagcaggagagtttctgcacaggaag
ttgttcagcagacatgacccccaggcagaggaggagttggctaagaggagagggaggagc
agccccaacggcaacctcctccgcatgctggtgctgttcttcttggagagtgagcttcat
gaacatgcagcctatctggtggactctctgtgggagagttctcaggagctgctgaaggac
tgggagtgtatgactgaattactgctggaggagcctgtacaaggagaggaggtgctgtca
gacagacaggagaattccctgatagagttgatggtgtgcaccatccggcaggcagcagag
gctcacccacccgtcggcaggggcactgggaagcgggttctcacggcgaaggagaggaag
actcagatcgacgacaagaacaaactgacagaacacttcatcatggccctgcccatgctc
ctgtccaagtaccaggccgactctgagaaggtggctaacctgctacagatccccatgttc
tttgacctggatgtgtacagcgctgggcgtatggagaagcacctagatgccttactgaag
cagatccgcctggtggtagagaaacacattgagacagacgtgctggaggcctgcagtaag
acctacagtatcctgtgttctgaagagtacaccatcatgaacagagtggacatcgcccgc
tcgcaactcatcgacgagatgacggaccgcttcacacactccgtagaagacctgctgcaa
gaggccgaggaggccgacgatgacgacatctacaacgttctgtctaccctaaagagactc
acggccttccacaatgctcatgacctgacgcggtgggacctgtttggtagctgctacagg
ttgttgaaggctggtattgagcaaggggccatgccagagcagatcgctgtccaggccctg
caatgttcccactactccatactgtggcagctggtgaagatcacagagggaactcctagt
aaggaggacctggtggctctgaggagagtggtgaagtccttcctggctgtctgtcagcag
tgtctgtccaatgtcaacacacctgtcaaagaacaggccttcatgttgttgtgtgacctg
ctgatggtcttcagtcaccagttggtctctgggggcagagaaggcctggaggccctggtg
ttcaacccagacagcaccttacagaacgagctgctcaccttcatcctggaccacgtcttt
atagaccaggacgatgagaaccagagcatggaaggcgatgaggaggatgaagccaataag
atagaagctcttcacaagaggagaaacctgctagcagccttcagcaaactcatcatctat
gacatcgtggacatgcccgctgcagcagacatcttcaaacactacatgaagtattataat
gactatggtgatatcatcaaggagactctcagtaagaccagacagagtgataagatcctc
tgtgccaagaccctcatcctcagtctgcaacagctgttcaacgagcttcttcaggaccag
ggtcctactctggacagaacgtcgtctcacgtcagcggcatcaaggagttggcccggcgc
ttcgccctcaccttcggcctggaccagatcaaaaccagagaggctgtcgctacactgcac
aaggatggtatagagtttgcctttaagtaccagaacccccatggtgcagagttccctcct
cctaacctggccttcctagaggtcctctcagagttctcctccaaactgctgcgacaggac
aagaagactgttcactcgtatctggagaagttcatgtcagagtcgatgtcggagcgtcgt
gaggacgtgtggctgccgttaatctcctaccggaacagtctgctaacaggaggagaggat
ggggaccggatgtcggtaacgtcaggcgccagcagcaagaccagctccatccgcagcaag
aagggacggacgccaatacacaagagtaaacgcatcgaggaggagagtagtgtggaggcc
tcctggcttcgtggtaatgacagcctccagacaccgggggcgctaaccacccctcagctc
acctccaccgtcctcagagaaaacccacggcaggcggcggacacacacctacctgaccac
gactctgaacctggctcagagaacgactatgtacacaatccccagatgcagatgtcttgg
ctaggccaacagaagatggaggacagcaggaaggatagaacagccatgaactacatgaag
gcccgcaaccagactgtcagacaaactgttcgtggtctgatggaggatgacgcggagcca
atctttgaggacgtcatgatgtcatcgcgaggtcaactggaggacatgaacgaggagttc
gaagacaccatggtcatcgacctgcctccctccaggaacaggcgtgagagggcggagctc
agaccagacttctttgactcagcagcaatgatcgaggacgagtcgggtttcaccatgccc
atgttctga
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