Salvelinus namaycush (lake trout): 120051406
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Entry
120051406 CDS
T07522
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120051406
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120051406
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120051406
Peptidases and inhibitors [BR:
snh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120051406
Ubiquitin system [BR:
snh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120051406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
120051406
NCBI-ProteinID:
XP_038854177
UniProt:
A0A8U0R2Z1
LinkDB
All DBs
Position
Sna7:52107541..52131780
Genome browser
AA seq
2598 aa
AA seq
DB search
MTVTTRGSPVGGNDSQGQAPADSQSQPPPTQVQTVSPLQTVSPNPSSTEPSPVSPPAAEE
EQGQGDSAPALEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGL
DVKCEACQRFFRDGLTISFTKILTDEAVSGWKFEIHRCIITNTHRLVELCVTKLPQDWFP
LLELLATATNPHCKFHIYNGTRPSETIPAGATLADDELFARPPDPRSPKGWLVDLINKFG
TLNGFQTLHDRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENL
TDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFN
GKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQY
VEKLEKILRFVIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLF
DCFKESWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQAL
SAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQ
TQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRPFSKAEHADFDPQTVRVGSRY
SHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWRCLAESAVFLCDREACFKWYSKLMGDE
PDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLEL
IGLDYLWRVVIQGTDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQLCFDRLKASYD
TLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERSILPMSRAFRGKHITL
IVRFPNQGRQVDDMDIWSHTNDTIGSVRRGILTRIKANATHTKIELFIGGEVVDPADDRK
LIGQLNLKDKALITAKLTQVSATVPSSPDSSSDSSTGSPSNHGNHFSEGPNPEVEGCLPG
VIMSLHLRYISFLWQVADLGCTLNMPLLRDGARLLMKLMPPDNGTVENLRAICLDHAKLG
ENSLSPTLDSRFFAPSPSQVLYLTEVVYALLMPASGTLGEDASDFQYNFLKSGGLPLVLS
MLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPVVEGTSPASPIN
QATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDESLPPNSQNFFQASKYIPDLC
VIRAVQKIVWASGCGTVQLVFSSNEEISQIYEKTNAGKEPDGEDEMVCCEALEIMTLCFA
LLPTALDTLSKEKAWQTYIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLL
FTVLGSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEALLNNEIDWLKKIRDEVKRT
GETGVEETILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQY
VKSGEFPTEQAIPVCSSPASINAGFELLVALPVGCVRNLKQIVDTLTDMYYLGCEALTEW
EYLPPVGPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGVLAVEGTGTDVDDELSGD
EKQESETNADGTARDEVFAYQQQFDDKPSLSKSEDRKEYNIGVLRHLQVIFGHLASSRLQ
YYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKAMGHASMLSKVLGGSFAD
QKICRDCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDT
VKRLLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDG
NPESQMIMQNEPSEPDPPGCSSKYRLVGVLVHSGQASGGHYYSYISQRDGGAGGSADSGQ
KERWYKFDDGDVTECKMDDDEEMKSQCFGGEYMGEVFDHMMKKMSYRRQKRWWNAYILFY
ERMDTAGGGAAVEADGELARCISELTVSPTTPRQVTMPGAIECSVRKQNVQFMHSRMQYS
LEYFQFVKKLLTCNSVYLNPPPGQDHLLPEAEEIAMISIQLAARFLFSTGFHTKKVVRGP
AGDWYDALCILLRHSKNVRCWFANNVLFAYPTRFSEYLLECPSAEVRGAFAKLIVFIAHF
SLADGPCPAPASSPEGSTQGCDNLSLSDHLLRAVLNLLRREVSEHGRHLQQFFNLFVMYA
NLGLAEKTQLLKLSVPATFMLVALDEGPGPPIKYQYAELTKLYAVVSQLLRCCDVSTRMQ
SSINGNPALANPYGDANLTTPIMPLQQLVSEILFVRTSYVKKIIEDCSNSEETVKLLRFS
CWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDR
DGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCTVAYQILQSNGDLKRKWTWAVEWLGDEL
ERRPYTGNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEEEPDDQEATE
DHDSSPPEDTALYPHNPAPATQFQQQNNHPHAQPYTGPAAQHMNTPQRPPQRAQESWEST
TEEVGPVAPPPAVQTTKE
NT seq
7797 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcaccacccgtggctcccccgtggggggcaatgatagccagggccaggcaccc
gctgattctcagagccagcccccacccacacaggtccagacggtgtccccgttgcagact
gtgtcccccaacccgtcgtccacggagccgtctcctgttagcccaccggcggcggaggag
gagcagggccaaggagactctgcccctgctctggaggaggaggagcctgccttccctcac
actgacctggccaagctggatgacatgatcaacaggccccgatgggtagtcccagtcctg
ccaaagggggaattagaagttctacttgaagctgctatagacttatgtaaaaaagggctt
gatgtgaagtgtgaggcgtgccagaggtttttcagggacggcctgaccatctccttcact
aagatcctcacagacgaggctgtcagcgggtggaagtttgagatccataggtgtatcatc
accaacacacaccggctggtggagctgtgtgtgaccaagcttcctcaggattggttcccc
ttactggagctactggccacagccaccaacccccactgcaagttccacatctacaacggc
acgcggccctctgagaccatccccgccggggccacactggccgatgacgagctcttcgcc
cgcccacccgaccctcgctcacccaagggctggttggtggacctgattaataagtttggc
acactgaacgggtttcagactcttcacgaccgcttcatgagcggacaggcactcaacgta
cagatcatcgctgccctcatcaagccgttcggccagtgctatgagttcctgaccttgcac
acagtgaagaagtacttcctgccagtgatcgagatggttcctcagttcctggagaacctg
acggacgaggagctgaagaaggaggccaagaacgaggccaagaacgatgccctgtccatg
atcatcaagtccctgaagaacctggcctccagggtgcccggtcaggaggagaccgtcaag
aacttggagatatttaggttgaaaatgatccttaggttattgcagatttcctcattcaac
ggcaagatgaacgctctgaatgaggtcaacaaggtcatctccagcgtgtcctactacacg
catcggcatggcaaccccgaggaggaggagtggctgacggcagaacgcatggcggagtgg
atccagcagaaccacatcctctccatcgtgctgagggacagcctccaccagcctcagtac
gtagagaaactagagaagatactccgcttcgtcatcaaggagaaagccctcaccatgcag
gacctggacaacatctgggcagcgcaggctggtaagcacgaagccatagtgaagaatgtc
catgaccttctggccaaactggcctgggacttctctccagagcagctcgaccatctcttt
gattgcttcaaggagagttggacgaatgcgagtaagaagcagcgtgagaagctgctggag
ctgatccgtcgtctggcggaggacgataaggatggagtgatggcccacaaggtgctcaac
ctgctgtggaacctggctcacagtgacgacgtccccgtggacatcatggaccaggccctc
agtgcacacatcaagatactggactacagctgctctcaggacagagacacccagaagatc
cagtggatagaccgcttcatcgaggagctgcgcaccaacgacaagtgggtcataccagcc
ctgaagcagatcagagagatctgcagcctgtttggggaagctcctcagaacctcagtcag
acccagaggagtcctcatgtgttctatcgtcatgacctgatcaaccagctgcagcacaac
catgccctggtcactctggtggctgagaacttgtctgcctacatggagaccatgagaccg
ttctccaaagctgaacacgcagactttgaccctcagacggtcagagtgggcagtcgctac
agtcatgttcaggaggtccaggagaggctcaacttcctgaggttcctgttgaaggacgga
cagttgtggctatgtgctcctcaggccaagcagatctggaggtgtctggctgagagcgcc
gtctttctgtgtgaccgggaggcgtgcttcaaatggtactctaagctaatgggagatgag
ccagacctggacccggacatcaacaaggacttctttgagaacaatgttctgcaactggac
ccgtccctgctcacggagaacggcatgaagtgcttcgagaggttcttcaaggccgtcaac
tgccgcgagggcaaattggtggccaaacgcagggcctacatgatggatgacctggagctc
ataggactggactacctgtggagggtggtgatccagggtactgatgacatcgccagccga
gccatcgacctgctgaaggagatctacaccaacctggggcccaagctgcaggtcaaccag
gtggagatccacgaggacttcatccagttgtgttttgaccgtctgaaggcgtcatacgac
acgctgtgtgtcctggacggggacaaggacagcatcaactgtgcccggcaggaggccatc
cgcatggttcgcgtgctcaccgtgctcaaggagtacatcaacgagtgtgacagcgactac
cacgaggagaggtccatactgcccatgtccagggcgttccgggggaagcacatcacgttg
attgtgcgtttccctaaccagggtcgtcaggtggatgacatggacatctggtctcacacc
aatgacaccatcggctcggtgcgccgcggcatcctcacacgcatcaaggccaacgccacg
cacaccaagatagagctcttcattggcggggaggtcgtcgacccggcggatgacaggaag
ctgattggacagctgaacctcaaggacaaagcattgatcacagccaagctgacccaggtg
agtgccaccgtgccctccagtcctgacagctcctcagactcctccactggctcgcccagt
aaccacggcaaccacttcagcgaagggcccaacccagaggtggagggctgcctgcctgga
gtgatcatgtctctccacctgcgctacatctcgttcctgtggcaggtcgcagacctgggc
tgtaccctcaacatgcctctgctgcgagacggagccagactcctcatgaagcttatgcct
ccagacaacggtaccgtggagaacctgcgcgctatctgtctggatcatgccaagctggga
gagaacagcctgagccccacactggactcccgcttctttgccccctcgccctcacaagtc
ctctacctcactgaggtggtgtatgcgttgctgatgccggccagcggcaccctcggcgag
gacgccagcgacttccagtacaacttcctgaagagcggcggcctcccgctcgtactgagc
atgctcaccaggaacaacttcctgccgtcggccgacatggagacgcgacggggggcgtac
ctcaatgccctgaagatcgccaagctactgctgaccgccgtggggttcggacacgtcaaa
gctgtggccgaggcctgccagcccgtagtggaggggaccagccccgcgtcaccgatcaac
caggcgacccacgaccaggccctggtcctccagagtgctctacagaatatccccaacccc
gcctctgagtgcatgctccgcaacgtggccatacgactggcccaacagatctctgacgag
tcactgcccccgaactcccagaacttcttccaagcatccaagtacatcccagacctctgt
gtgatccgggcggtgcagaagatcgtgtgggcttcaggctgtggcacggtacagctggtc
ttcagctctaatgaagagatcagtcagatctatgagaagacgaatgcgggtaaggagccg
gacggggaggatgagatggtgtgctgtgaggcgctggagatcatgaccctgtgttttgcc
ctgctgcccaccgctctggacacactcagtaaggagaaggcctggcagacttacatcata
gacctgctactgcactgccacagcaagtcagttcgtcagatggctcaggagcagttcttc
ctcatggccactaggtgctgtatgggacacagacccctcctcttcttcattaccctcctc
ttcaccgtcttagggagcacggcgaaggagagggcgaagcacgcaggggactactttacg
ctgctgaggcacctgctgaactacgcctacaacagcaacatcaacctgcccaacgctgag
gcgctgctcaacaacgagatcgactggctcaagaagatcagggatgaagtgaagcggaca
ggagagacgggggtggaggagaccattctagaaggtcacctgggggtcaccaaggagctg
ctggccttccagacaccagagaagaagtactacattggctgtgagaagggtggggccaac
ctcataaaggagttgatagatgacttcatcttcccggcatctaacgtgtacctgcagtac
gtgaagagtggggagttccctacggagcaggccatccctgtctgtagcagccccgcctcc
atcaatgccggcttcgagttgctggtggctctgccggtcggctgtgtccggaacctcaag
cagatcgttgatacactcactgacatgtactacctaggttgtgaggctctgacagagtgg
gaatacctgcccccagtgggcccgcggcccaccaaaggctttgtggggttgaagaacgcg
ggggccacctgctacatgaactcggtcatccagcagctctacatgatcccgcccatccgt
aacggcgtcctggccgtggagggcaccggcaccgacgtggacgatgaactgtccggggac
gagaagcaggagagcgagactaatgccgacggaacggcgcgggacgaggtgttcgcctac
caacaacagtttgacgacaagccctcgctgagtaagtcggaggacaggaaggagtacaac
atcggggtgttacgccacctgcaggtcatctttggtcacctggcctcctcccgactgcag
tactacgtaccccgaggcttctggaaacagttcaggttatggggtgagccggtgaatctg
cgagagcagcacgatgccctggagttcttcaactctttagtggacagtctggatgaggct
ctgaaggccatgggccacgcctccatgctcagcaaggtgctgggaggctcctttgccgac
cagaaaatctgccgtgactgtccacacaggtatgagtgtgaggagtcattcaccacgttg
aacgtggacatcaggaaccaccagaacctgctggactctatggagcagtacgtcaaagga
gacctgctggagggagccaacgcataccactgtgagaagtgtaacaagaaggtggacaca
gtgaagcgtctgctgataaagaagcttcctccagtgctggccatccagctaaagaggttt
gactacgactgggagagggagtgtgccatcaagttcaacgactactttgagttccccagg
gagctggacatggagccctacactgtggccggggtggccaagctggagggagacgacggc
aacccggagagccagatgatcatgcagaacgaaccatcggaacccgacccaccaggctgc
agttctaagtaccgcctggtgggggtgctggtgcattcgggccaggccagcggcggccac
tactactcctatatcagccagcgagacggcggcgccggcggtagcgccgacagcgggcag
aaggagcgctggtacaagtttgacgacggcgacgtgacggagtgcaagatggacgacgac
gaggagatgaagagccagtgcttcgggggggagtacatgggagaggtgtttgaccacatg
atgaagaagatgtcctacaggaggcagaagagatggtggaacgcctacatcctgttctat
gagaggatggacacggcagggggaggggccgcagtggaggcagacggagagctggccagg
tgcatctcagagctgactgtgtctcccactacaccacgacaggtgacgatgccgggggcc
attgaatgcagtgtgaggaagcagaatgtccagttcatgcacagccgcatgcagtacagc
ttggagtacttccagttcgtcaagaagctgctgacctgcaacagcgtctacctcaaccct
cccccgggtcaggaccacctgctgcccgaggcagaggagatagccatgatcagcatccag
ctagcagctaggttcctcttcagcaccgggtttcacactaagaaagtagtccgggggccc
gccggtgactggtatgacgccctgtgcatcctgctacgccacagtaagaacgtccgctgc
tggtttgccaacaacgttctgtttgcgtaccccacgcgattctctgagtacctgctggag
tgtcccagtgccgaggtccggggagccttcgccaaactcatcgtcttcatcgcacacttc
tccctggcggatgggccatgccccgcccctgccagctcccctgaggggtccacacagggc
tgtgataacctgagtctgagtgatcacctgttgagggctgtgttgaacctgctcaggaga
gaggtgtcagagcacggccgacacctgcagcagttcttcaacctcttcgtcatgtacgcc
aacctgggtctggcagagaagacccagttgttgaagctgagtgtccctgctaccttcatg
ctggtggctctagacgaggggcctggccctcccataaagtaccagtatgcagaactgacc
aagctctacgctgtggtctcccagctactgcgctgctgtgatgtctccacacgcatgcag
tcctccatcaatggtaacccggccctggccaacccgtacggagacgccaacctgaccacc
cccatcatgcccctgcaacagctggtgtcagagatcctcttcgttaggaccagctacgtg
aagaagatcatcgaggactgcagcaactctgaggagacagtcaagctgctgcgcttcagc
tgctgggaaaacccccagttctcctctaccgtgctgtctgagctgctctggcaggtggcg
tactcctacacgtacgagctgaggccttacctggacctgctgctgcagatactgctgata
gaggactcctggcagacccacaggatccacaacgtgctgaagggtataccagacgacagg
gacggcctgtttgacaccattcagcgctctaagaaccactaccagaaacgggcctaccag
tgtatcaagtgcatggtggccctgttcagcaactgtactgtggcctaccagatactacag
agtaacggggacctgaagcgtaagtggacgtgggcggtggagtggctgggggacgagctg
gagaggaggccctacacagggaacccccagtacacctacaacaactggtctccccccgtc
cagagcaacgagacctccaacgggtacttcctggagcgctcgcattccgcacgcatgacc
ctggccaaggcctgcgaactttgccccgaggaggagccagatgatcaggaggcaacagaa
gatcacgactcctcccctcccgaggacacagcgctgtacccccataaccctgctcctgcc
acgcagtttcagcagcagaacaaccacccccacgcccagccctatacgggtccggctgcc
cagcacatgaacacgccccagcggcccccacagagagcacaggagagctgggagagcacc
acagaggaggtggggcccgtggcgcccccgcccgctgtccagacgacaaaagagtaa
DBGET
integrated database retrieval system
