Salvelinus namaycush (lake trout): 120051427
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Entry
120051427 CDS
T07522
Name
(RefSeq) paraspeckle component 1-like
KO
K24993
paraspeckle component 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120051427
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120051427
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
120051427
NCBI-ProteinID:
XP_038854219
UniProt:
A0A8U0UJ78
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Position
Sna7:complement(53100883..53115654)
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AA seq
550 aa
AA seq
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MAHRNLKQVNIQNNAPSPKPQQQYRQQQQQQHTKRNMDSPGMERRPNVADGKAPPPKPST
AASPAAEGEGGAGESQEMTLDIKSFRRPGEKTFTQRCRLFIGNLPTDLTEDDFKKLFSKY
GEANEVFINRDRGFGFIRLETRTLAEIAKAELDGTVLGNRPIRIRFATHGSALTVRNLSP
VVSNELLEEAFSEFGPVERAIVVVDDRGRPTGKGFVEFANKPCARKALDRCADGALLLTT
SPRPAIVEPTEQLDEEDGLPEKLLVKSVHYHKEREHPPRFAQPGTFEFEYSSRWKALDEM
EKQQRDQVERNIREAKEKLEQEMEAAKHEHQLMMMRQDLMRRQEELRRLEELRNQELQKR
KNIEMRHEERRRQEEEMMQRHREQEEMRRQPDGFKPNYADSREQEMRMGELGPRGAINMG
DGFNPASVAGASVNQGPPQMMGIGISGRAGAMGPEGTPNMGAPNMMPDNGAMLRTDRFPQ
GAPNQIGSSPMSGRPGVESPQQQQAVGAGLMGAGLMGAGPGPAVGGPASFGRGIPVVGNY
EGPNNKRRRY
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctcaccgaaatctaaaacaggtcaacattcaaaacaacgcaccgtcgccgaaacct
cagcagcagtaccgccagcagcagcagcagcagcacacaaagcgcaacatggactctcca
ggcatggagcgaaggccgaatgttgcggatgggaaagccccaccaccaaagccgtcgacg
gctgccagccctgcggcagagggggagggtggagccggagagtcgcaggagatgacgctg
gatataaagagtttcaggagacccggggagaaaaccttcacgcagcgatgtaggttgttc
atcggtaacctcccgacagacctcacggaggatgatttcaaaaagctgttttcaaagtat
ggcgaggctaacgaggtgtttatcaaccgagaccgaggattcggcttcattcgactggaa
accaggacgctggcggagattgccaaggcagagctggacggcacagtgctggggaaccga
cctatccggatccgcttcgccacgcatggctctgccctcacagtgcggaacctttcgccc
gtggtctccaacgagctccttgaggaggccttctcggagttcggcccagtggaaagggct
atcgttgtggtggacgaccgtggaaggcccactgggaagggcttcgtggagtttgccaac
aaaccttgtgctcgtaaagccctggatcgctgtgctgacggggcgctgctgctcaccacg
tctcctcggcctgccatagtggaacccaccgagcagctggatgaagaggatggactccca
gagaagttgctggtgaaatctgtacactaccacaaggagagggagcaccccccgcggttt
gcccagccggggacatttgagtttgagtactcgtcccgctggaaggccctggacgagatg
gaaaagcagcagagagaccaggttgagcgcaacatccgagaggccaaggagaagctggag
caagagatggaggccgccaagcacgagcatcagctcatgatgatgagacaagacctgatg
aggcgtcaagaggagctgagacgtctggaggagcttcgcaaccaggagctgcagaaacgc
aagaatatagagatgagacatgaggagaggcgtaggcaggaggaggagatgatgcagcgc
catcgagagcaggaagagatgagacgccaaccggacggcttcaagccaaactatgcggac
agcagagaacaggaaatgagaatgggtgaactgggccctcgtggagccattaatatggga
gatgggtttaaccccgcctctgttgctggggccagtgtaaaccagggaccccctcaaatg
atgggcataggcataagcggaagggccggagccatgggccccgagggaactccaaacatg
ggcgcaccaaacatgatgccagacaatggagccatgctgcgcaccgataggttcccccag
ggggctcctaatcagattggttcgtcccccatgagtggccgtccaggtgtcgagtcccct
cagcagcaacaggcagtgggagcagggctaatgggggcagggcttatgggggcagggcct
gggcctgcagtgggggggcctgcaagcttcgggaggggaatccccgttgtgggaaactat
gaagggcctaacaacaaacgtcgcagatactga
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