Salvelinus namaycush (lake trout): 120051456
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Entry
120051456 CDS
T07522
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG3 isoform X1
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04136
Autophagy - other
snh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120051456
04136 Autophagy - other
120051456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120051456
04121 Ubiquitin system [BR:
snh04121
]
120051456
03029 Mitochondrial biogenesis [BR:
snh03029
]
120051456
Membrane trafficking [BR:
snh04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
120051456
Ubiquitin system [BR:
snh04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
120051456
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120051456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Med13_N
Motif
Other DBs
NCBI-GeneID:
120051456
NCBI-ProteinID:
XP_038854248
UniProt:
A0A8U0R1S3
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All DBs
Position
Sna7:54496929..54502676
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AA seq
314 aa
AA seq
DB search
MQNAINSVKGTALGVAEFFTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWVSGEE
EKVKPYLPKDKQFLLTRNVPCYKRCKQMEYCDELEAIIEEDDGDGGWVDTYHNSGIGGVT
EAVREISLDNKDMNMNVNSGASGNGDDDDDEDEAADMEEYEESGLLETDEATLDTSKMVD
LSKSKTGEAGNDDILQTRTYDLYITYDKYYQTPRLWLFGYDEDRQPLTVDQMYEDISQDH
VKKTVTIENHPHLPPPAMCSVHPCRHAEVMKRIIETVAEGGGELGVHMYLLIFLKFVQAV
IPTIEYDYTRHFTM
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgccattaattccgtaaaaggaacggcccttggtgtagccgagttttttact
ccagtgctgaaggaatccaaattcaaggagactggggttatcaccccagaagagtttgta
gctgctggagatcaccttgttcatcactgccccacatggaaatgggtgtctggggaagag
gagaaggtgaagccgtatttacccaaggataagcagttcctattgactcgcaatgttccc
tgctacaagcgctgtaaacagatggagtattgtgatgaactggaagccatcatagaggag
gatgacggagatggaggatgggtcgacacctaccacaactcaggtatagggggagttaca
gaagctgtacgagaaatctcattggacaacaaggacatgaacatgaatgtgaactctggt
gctagtgggaacggtgatgatgatgatgatgaagacgaggcagcagatatggaagagtat
gaggagagtggactactggaaacagatgaggccaccctggacaccagtaaaatggtggac
ttgtctaaatccaaaacgggagaggctgggaacgatgacatcctgcagactcgaacgtat
gacctctacatcacatatgacaaatactatcagactcctcgactctggctatttggatac
gatgaggacagacagcccctgacagtggatcagatgtacgaggacatcagccaggatcat
gtgaagaaaacagtcaccatcgaaaatcacccccacctaccacccccggccatgtgctct
gtgcatccctgcagacatgctgaagtgatgaaaaggatcatcgagacggtggcggaaggg
ggaggagaacttggagttcatatgtatctgttgattttcttgaagtttgtccaggccgtc
atccccacgatagaatacgactacacaaggcacttcaccatgtag
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