Salvelinus namaycush (lake trout): 120051717
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Entry
120051717 CDS
T07522
Symbol
apba1a
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 1
KO
K04531
amyloid beta A4 precursor protein-binding family A member 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120051717 (apba1a)
Membrane trafficking [BR:
snh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
120051717 (apba1a)
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
120051717 (apba1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
PDZ_2
PRT6_C
NRho
DUF1435
Motif
Other DBs
NCBI-GeneID:
120051717
NCBI-ProteinID:
XP_038854535
UniProt:
A0A8U0R3T0
LinkDB
All DBs
Position
Sna1:complement(42171449..42204824)
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AA seq
761 aa
AA seq
DB search
MALDLEAEDEGGTYEVMLRPEAEGYTESAESEQHHPHPQPNLNLNYPPQPPPLPREPLPD
VGRPPSQEEAEETLNPGGGYSNYVYTQPLNLHGGGARVPGGRDISIEEGMEPKDEAYSEA
YHYSLTEHVYEEINDAPSAQRKAGFRLFEGRDGGGDYWQQEAVGSRLHHYDERSDGESDS
PEKEAEFAPYPRADSCDQDGEEDINMIVTEVRESASSQSLERAAAGLGEGGDKEDMMKGG
EEEGDSYNSQSDAPTDSKHPKGEMEIEGDEREGENVPAPADSPSEDSSGVRNSREKRDAI
TLAIKDIKEAIEEVKTRTVRSPYTPDEPKEPIWVMRQDLSPTAECCDLQPSLGGDSRRSL
ASFPTYVEVPGPCDPEDLIDGIIFAANYLGSTQLLSDKTPSKNVRMMQAQEAVSRIKTAQ
KLAKNKKKAPEGEAQPMTEVDLFISTQRIKVLNADSQETMMDHTLRTISYIADIGNIVVL
MARRRMPRPDSMDSVEASDPAEDEKQRQYKMICHVFESEDAQLIAQSIGQAFSVAYQEFL
RANGINPEDLSQKEYSDLLNTQDMYNDDLIHFSKSENCKDIYIEKQKGEILGVVIVESGW
GSILPTVIIANMMHAGPSEKSGRLNIGDQIMSINGTSLVGLPLSTCQTIIKGLKNQSRIK
LNIVRCPPVTTVLIRRPDLRYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSV
VATPHEKIVHILSNAVGEIHMKTMPAAMYRLLTAQEQPVYI
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggccctagatcttgaggcagaggacgagggcggtacttacgaggtgatgcttcgccca
gaggcggagggatacacagagagcgctgagtcagagcagcaccatccccaccctcagccc
aacctgaacctcaactacccccctcagccccctcccttaccccgggaacccctaccagac
gttgggagaccccccagtcaggaggaggcagaggaaaccttgaaccctgggggtggttac
tctaactacgtctacacccaacctctcaacctccatgggggaggggccagggtgccgggg
ggacgggacatcagcatcgaggaagggatggagcctaaagacgaggcatattctgaagcc
taccactactccctgacagaacatgtgtatgaggagatcaacgacgccccctctgctcag
agaaaggcggggttccgtctgtttgaggggagggacgggggcggggactactggcagcag
gaggcagtggggtcgaggctgcaccactacgacgagcgctcggacggcgagtcagacagc
cctgagaaggaggcggagtttgctccgtacccgcgggcagacagctgcgaccaggacggt
gaagaggacatcaacatgatcgtaacggaagtcagagagagtgccagctctcagagtctg
gagagagctgctgctgggttgggggagggaggggacaaagaagacatgatgaaaggagga
gaggaagagggagactcttacaactcccaatccgacgcccccacagactccaaacatccc
aagggagagatggagattgagggggatgagagagaaggagagaacgttccagccccagca
gacagtccctctgaggactcgtctggggttcgtaacagtcgtgagaaaagagacgccatc
accctggccataaaggacatcaaggaggccatagaggaggtgaagaccaggacggtgagg
tcaccctacacccctgatgagcctaaagaacccatctgggtgatgagacaggacctgagt
cccaccgctgagtgttgtgacctgcagccctcactagggggcgactccaggagaagcctg
gcctcctttcctacctatgtagaagtcccaggtccatgtgacccagaggacctgatcgat
gggatcatctttgctgctaactacctgggctccacccagttgctgtctgacaagaccccc
tccaagaacgtccgcatgatgcaggcccaggaggctgtcagccgcatcaagacggcccag
aaattagccaaaaacaagaagaaggctccagaaggtgaggcccagcccatgacggaggtg
gacctcttcatctccacccagaggattaaagtcctcaacgctgactcacaggagactatg
atggaccacactctgaggaccatctcctacatcgctgacatcggcaacattgtggttctg
atggcaaggcgccgtatgccccgcccagactccatggacagcgtggaggcgtcagacccc
gccgaggacgagaaacaaaggcagtacaagatgatctgccacgtctttgagtccgaggac
gcccagctgattgctcagtctataggccaggccttcagtgtggcgtaccaggagttcttg
cgagctaacggcatcaacccagaggacctgagtcagaaggagtacagtgacctgctcaac
actcaggacatgtacaacgatgacctcatacacttctccaagtctgagaactgcaaagac
atttacatcgagaagcagaaaggtgagattctgggcgtggtcattgtggagagtgggtgg
ggctccatcctgcccacagtcatcatcgccaacatgatgcatgctggtccgtcggagaag
tcaggccgtcttaatatcggagaccagattatgtctattaacgggaccagtctggtgggg
ctacccctgtccacctgccagaccattattaagggtctgaagaaccagtctcgtatcaag
ctgaacatcgtcaggtgtcctcctgttaccacggtgctcatcagacgacctgacctcaga
taccagctgggcttcagcgtacagaatggcattatctgcagccttatgcgagggggcatc
gctgagaggggaggggtcagggtcggccaccgcatcatcgagatcaatggccagagcgtg
gtggccacgccccacgagaagatcgtccacatcctgtccaacgccgtgggagagatccac
atgaagacgatgccagctgccatgtaccgcctgctaactgcccaggagcaacctgtttac
atctag
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