Salvelinus namaycush (lake trout): 120051813
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Entry
120051813 CDS
T07522
Name
(RefSeq) vesicle-trafficking protein SEC22b-B-like
KO
K08517
vesicle transport protein SEC22
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04130
SNARE interactions in vesicular transport
snh04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120051813
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120051813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120051813
Membrane trafficking [BR:
snh04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
120051813
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Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
120051813
NCBI-ProteinID:
XP_038854626
UniProt:
A0A8U0UK56
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Position
8:18351347..18358608
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AA seq
215 aa
AA seq
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MVLLTMIARLADGLPLAASMQEDEQLGRDLQQYQSQAKQLFRKLNDQSPTRCTLEAGSMS
FHYVIEKGVVYLVLSEASFHKKLAFAYLEDLQAEFHEQHGKKVSTVSRPYSFIEFDTYIQ
KTKKSYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKY
RSDAKYLNTRSTYAKLAAGGVFFIMLIVYVRFWWL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgctgacaatgatcgctcggttggcggatggactgccgctggccgcatcaatg
caagaggacgaacagttgggtcgggacctgcaacagtaccagagccaggctaaacagctg
tttaggaaactcaacgaccagagtcccacacgttgcacattagaggctggctccatgtcc
ttccactacgtcatagaaaaaggagtagtctacctagtgctttctgaagcaagctttcac
aaaaaacttgcctttgcttacctggaagacctgcaggcagagttccatgaacagcacggg
aagaaagtctccactgtgtcccgaccgtactccttcattgagtttgacacctacattcag
aagaccaagaagtcgtacatagacagccgagcccgcaggaacctgggcagcatcaacaca
gagctgcaggatgtccagaggatcatggtggccaacattgaggaagtgttgcaacgaggg
gaggccttgtctgctctggactccaaggccagtaatctgtccagcctgtcgaagaagtac
agaagtgacgccaagtacctgaacactcgctccacctatgctaagctggctgccggaggg
gtcttcttcatcatgctcatcgtctacgtccgcttctggtggctctga
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