Salvelinus namaycush (lake trout): 120051821
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Entry
120051821 CDS
T07522
Name
(RefSeq) LOW QUALITY PROTEIN: lipoxygenase homology domain-containing protein 1-like
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120051821
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120051821
Cilium and associated proteins [BR:
snh03037
]
Other cilia and associated proteins
Stereociliary proteins
120051821
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Other domain-containing proteins
Others
120051821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
DUF7755
Motif
Other DBs
NCBI-GeneID:
120051821
NCBI-ProteinID:
XP_038854636
UniProt:
A0A8U0R1V4
LinkDB
All DBs
Position
Sna1:complement(44662277..44705199)
Genome browser
AA seq
2408 aa
AA seq
DB search
MYVGNYSRRGLPEPPQATLQSALPRSLYGSGPILLSPAGHYGGTTARKRGRTKKNKKKAK
KDSEEEYEVRSSESKSTDDEDHSDTINNKKKRAERLPGVIEATSKGTKKNKDHQEKDMGS
KDKKSKDDDKKSKKDKKEGEQPREQGDEEGDGKKKKKKAKKGSGGDSDEDTKKVKGKKKK
LVENYVEIYENELRNYEPDSMENYEDEYHKKKVYEVVTITGDERGAGTDANVFITLFGEY
GITPKVHLASKSRTAFEKNKTDVFRIKTHNVGPLKKIRIEHDNTGLNASWFLDRVVVTDI
TRPHMRFYFTCNNWLSKVEGDNLFVRDLLGSLDPMDLPKYNKYVVSVFTADVKGSGTDAD
VFINIFGEFGDTGERRLDNKKDNFEKGTEDKFTLEAPHLGRIRKITLGHNNKGSSAGWFV
DKVLLDDMGNKSLYEFPINRWFAIDEDDGKIQRDILVGGSEPTGIVYHVQVVTGKIRGAG
TNSNIHMLMHGTKGLKNSGKIFLQGGKFERGLTDIFNVEISALLSPLSRVTIGHDNGGVS
AGWYCEKIVVFCPFTGIEQTFPCSKWLDEGEGDGLIERELYEMVSLRQRKQKKHPWSLWI
WTSDLPGAGTDASVYFQIYGEKGKSDEMRLDNKADNFEQGQLDKFMVELPDLGKLTKCRI
WHEKRSPFAGWHLSKASLMKTLTKEKFKFPCERWLDTNEDDNELVREMPATGDLIAEPLP
LIKYRVTVCTGKFGGSGTDATVFLNLIGDLGDTGERTLVNCKNNVNKFEKGNMDEFIIEA
VSIVQVRRVRIGHNGRGGGCGWYLEKVMVREEGQAESQVVEFPCGRWLDRNEDDGQIVRE
LVPFSDGQRLYNVSYHVSVKTGSVSGGSSNSTVFVKLYGEKEDTSKMMLVVSDNNLRNYF
EVGRVDVFTVETFDIGQINRLMIGHNNEGMNAGWFLDSVQIMVPASGSQYMFPSHRWLCT
DEADGKTEVVIYPSEILDIKQLMNYEITVVTGDVSFAGTNANVFIQIYGGKGKTEVVNLA
SRSNNYERATTEIFKIEASDVGKIFKVRIGHDEAGIGSGWFLEKVFVKHLIMGMVTKAKK
KDDKKKKKKKKVNQIFFQFPVLCNXQTFSNDLFYSQEAEEEETEEVMQEIVQTYVFPCSR
WLSRGEEDGELVVELLPEDTDELEENTYEVCVFTGDMLGAGTDANVYINIYGENGDTGER
LLRKSGNLNKFEAGQEDVFTITAIELGPLRKLRIRQDNAASYPSWYLDRVEIVDTKDDTT
YYFPCNRWLAVDEDDGQIARELVPVDEAFMKRDDDEEGTGAATLGLEQKAMSTTLTLKIK
TGEKKHAGTDANVFAILYGEKDDTGIINLKACKTHKNKFEQGMVDEFTVEAVDLGELEKL
RIGHDNSGGSPGWFLDWVEIDAPSQGQRLRFPCGRWLDNGEDDGAIVRDLYPNELQTELY
VPFVPYEIKMYTSDVFGAGTDADVFIVLYGWKGLCTQQKHLCVNKRERRLFFERGAEDMF
IVELEDVGDVIEKIRIGHDNRGTNPGWHLDRVEIRRLLRKGKGSETTILPCERWLAKSDD
DGETVRELVPSDIITEKLLKEGKLKHTEMEVEDALETHTYKVSVRTGDMYRGGTDAKVFL
TIYGDLGDTGERKLSKSESNSNKFERGAVDKFSIEAVDLGQVFKIHIRHDNSEFMGADWY
LDQVEVLDMETEEVYMFLCERWLSKKKEDKRIERTFYIKDYEGERNVDPNKKSTQAKIGL
DRNANKKKKKKAVVEEGPVIPYHFTVSTAMDPDASTTARVYVIVMGPNDIETERLWLDLP
EGKKSFAAGTMENFQCYGTDVGEIKRVELGHNGATPESCWLVDELSVAVPTKGIKYIFQC
KCWLAKDRGDGLTGRLFNVLDANSINIVRKIIYVATVITGDTQDAGTDTNIFLSVFGANG
STEEMLLPKNEDRFERGQEDTFNLEIDDIAPLKKIRVRIDGSGSRPDWFLDRIVMHNLTT
EEVSVFTNENWLSKTKGPKRTKICELAAVVDEEEMVERTTYIIQVQTSDIGGAGTDANVF
LIVFGENGDTGTLALKEGGSRNKFERKSKDVFRFPDILSLGELSKIRVWHDNKGPAPGWH
LEYIDVKDETMDQNFRFPCGRWLAKNVDDGQIMTELACANNDILDFSDKTKYEIATTTAN
TDGADTKENVWIVLEGKRGRSKEFVLENSSKKKRFLCGATDTFEFSSKHVGDIAGICVGH
TTKDSKKVKGEAFWHVLEVVVTEKGLGNKYLFHCDAQIPLAAKRDKFLTFECFKTIESFA
SKVRSLVPVKYEIIVITGDVKRAGTDSNVYITIYGSNGDSGKRALKQKFRNLFERGQTDR
FILEMLDLGELLRVKVEHDGSSHNSGWYLECVEVTNTANSVTTIFLCGKWLDPQKADGQI
QRVLYPKY
NT seq
7227 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtggggaactacagcaggagagggctgcccgaaccacctcaagccaccctgcag
tctgctctacccaggagtctgtacggctctggccccatcctgctgtcaccggctggtcac
tacggtggcactacagcaagaaaaagggggagaacaaagaaaaataagaagaaagctaag
aaggacagcgaggaggagtatgaggtgagaagcagtgagtctaagagtacagatgatgaa
gatcacagtgataccatcaataacaagaaaaagagagcagagaggctccctggtgtgatt
gaggccaccagtaagggaaccaagaagaataaagaccaccaggagaaagacatggggtca
aaggacaaaaaatctaaagacgacgacaaaaaatcaaaaaaagacaagaaagagggcgaa
caacctcgcgaacagggggatgaagaaggggatggcaaaaagaagaagaaaaaggccaag
aaaggctcagggggggacagtgatgaggacaccaaaaaggtgaaaggcaaaaaaaagaag
ctggttgagaactacgtggagatctatgagaatgaactacgaaactatgagccagattcc
atggagaactatgaggatgagtaccacaagaagaaagtgtatgaggtggtgaccatcact
ggagatgagaggggggcgggcaccgatgccaacgtgtttatcactctcttcggggaatat
ggcatcactccgaaggtgcacctggctagcaagagtagaacagcctttgagaagaacaaa
acagacgtctttaggatcaaaactcataacgttgggcctttgaagaagatacggatagag
catgataacacaggtttgaatgccagctggttcttggacagagtggtggtgacagatatt
accagacctcacatgaggttctacttcacctgtaataactggctcagtaaggtggagggg
gacaacctgtttgtcagggacctgctgggcagtctcgaccccatggacttgcccaaatat
aataagtatgtagtgagcgtgttcacagcagatgtaaaaggcagtggaacagacgctgat
gtcttcattaacatctttggagagtttggtgacaccggtgagaggcggttggacaataag
aaggataactttgagaaaggcacggaggacaagttcactttagaagctccccacctcggc
agaattaggaagattaccctgggtcacaacaacaaaggctcttccgctggatggtttgtg
gacaaggtgcttctggatgacatgggaaacaagtctctgtatgagttccccatcaaccgc
tggttcgccatcgatgaggatgatgggaagattcagagggacatcctagttggaggcagt
gagcccacaggtattgtgtaccacgtccaggtggtgacagggaagatccgaggagctggc
accaactccaacatccacatgctgatgcacggcaccaagggcctgaagaacagcggcaag
atcttcctgcaggggggcaagtttgagcgtggtctgacggacatctttaacgtggagata
tcggccctcctcagccccctcagccgagtcaccatcggacacgacaatggaggagtcagc
gctggctggtactgcgagaagatagtggtgttctgcccgttcacagggatcgagcagacc
ttcccttgcagtaaatggctggatgagggtgaaggtgatggactgatagagagagagctc
tatgagatggtctcactaaggcagaggaaacagaagaagcacccctggtctctgtggatc
tggacgtcagatctgcctggcgcaggaacagacgcatccgtttacttccagatctatggg
gagaagggcaagtcagacgagatgagactggacaacaaagcagacaactttgaacagggc
cagctggataagttcatggttgagctacctgacttggggaagcttacaaaatgtcgcatc
tggcatgaaaagagaagcccttttgcagggtggcatttgagcaaggcatctctgatgaaa
actttgacgaaggagaagtttaagttcccctgtgagcgctggctggatactaacgaggat
gacaacgagttagttagagagatgcctgccactggagacctgattgctgaacccctgccc
ttgataaagtaccgtgtgaccgtgtgcacggggaagtttggcggcagcgggacggacgcc
actgtcttcctcaatctgattggtgacctgggggacacaggcgaacgtacgctggtcaac
tgcaaaaacaacgtcaacaagtttgagaaaggcaacatggatgagttcattattgaggcg
gtgtcaatcgtgcaggtgcggcgagtgcgtatcgggcacaacgggcggggcggaggttgt
ggctggtacttggagaaagtgatggtcagggaagagggacaggctgagtctcaggttgta
gagttcccctgcggcaggtggctagatcggaatgaggatgacggacagattgttcgggag
ttggtgccattttcagacggacagcgtctttacaatgttagctatcatgtgtcggtgaag
acaggcagcgtcagtggaggcagctcgaactccacggtttttgtgaagctgtatggggag
aaggaagacaccagtaagatgatgctggtggtctctgacaacaacctgcgcaactacttt
gaggtgggccgggtggatgtgttcactgtggagacgtttgacattggacagatcaaccgt
ctgatgattggccacaacaacgaggggatgaatgctggttggttcctggacagtgtccag
atcatggtgccggccagtgggagtcagtacatgttccccagccaccgctggctctgtacg
gacgaggcagacggcaagaccgaggtggtgatctaccctagcgagatcctggacattaaa
caattgatgaactatgagataacagtggtgacaggtgatgtgagctttgctggaaccaac
gctaatgttttcatccagatctacggcggtaagggcaagacagaggttgtcaatctggcc
agcaggtccaacaactatgagagagcaactactgagatcttcaagatagaagccagcgac
gtaggaaagatcttcaaggtgcgtatcggccatgacgaggcggggatcggctccggctgg
ttcctagagaaggtattcgtcaaacacctaatcatgggcatggtgaccaaggcgaagaaa
aaggatgacaagaagaagaaaaagaaaaagaaggtcaatcaaatcttttttcagtttcct
gtactttgtaatnatcagactttctctaacgatctattctattctcaggaggcggaggag
gaggagacagaggaggtgatgcaggagatagtgcagacgtatgtgttcccctgctcccgc
tggctgagccggggggaggaggatggggagctggtggtggaactgcttcctgaggataca
gacgagctggaagagaacacctatgaagtgtgcgtcttcaccggggacatgctgggggct
gggactgacgccaatgtctacatcaatatttatggggagaacggggacacgggggagcgc
ctcctccggaagtcaggcaacctcaacaaatttgaggcagggcaggaggatgtgttcacc
ataacagccattgagctgggccccctgaggaagctacgcattcgtcaggacaacgcagcg
tcttacccctcttggtacctggatcgcgtggagatagtggacaccaaggatgacaccacg
tactacttcccgtgtaaccgttggctggcggtggatgaggatgatggacagatcgccagg
gagctggtgcccgtggatgaggccttcatgaagagggacgatgatgaagaggggacaggt
gcagccaccctggggcttgagcagaaagctatgtccacaactctaaccctgaaaattaag
acaggagagaagaaacatgctggaacggatgccaatgtttttgctatcctttatggagaa
aaagatgatacagggataatcaacctgaaggcgtgtaagacccataagaacaagtttgag
cagggcatggtggatgaattcactgtggaggctgtggacctgggagagctggaaaagcta
cgcatcggccatgacaactcaggtggctctcctggttggtttctggactgggtggagatc
gacgccccctctcagggccagagactccgtttcccatgtggccgttggctagataacgga
gaggatgatggtgccatagtgagagacctgtaccccaacgagctccagactgaactctac
gtgccatttgtcccctatgagatcaagatgtacacaagtgatgtgtttggtgctgggaca
gatgcagatgtgtttatagttctttacggctggaagggcctctgcacccagcagaaacac
ctgtgtgtcaacaagagagagagaaggctgttcttcgagagaggagctgaggatatgttt
atcgtggagttggaggatgtgggtgatgtcattgagaagatccgtattggccacgacaac
aggggcaccaaccccggctggcaccttgacagagtggagatcagacgcctactcaggaag
ggaaagggttcggagacgaccatcttaccgtgtgagcgctggttggccaagtcagatgac
gatggggagacggtgagagagctcgttccctctgatattatcacagagaaactgctgaag
gaagggaaactgaaacacacagagatggaggtggaggatgcccttgaaactcacacctat
aaggtgtctgtgagaacgggtgacatgtacagaggagggaccgacgccaaagtgtttctc
accatctacggagacctgggagacacgggggaacgcaaactcagcaagtctgagagcaac
agcaacaagtttgaaagaggggcagtggataagttctccatcgaggcggtggatcttggc
caggtgtttaagatccatatccgccacgacaactccgaatttatgggggcggactggtac
ctggaccaggtagaggtgttggacatggaaacagaggaggtatatatgttcctgtgtgag
cgttggctttccaagaagaaggaggacaaacgcatcgagagaaccttctacatcaaggat
tatgagggtgagaggaacgttgatccaaacaagaagagcacccaggccaagatagggctg
gacaggaatgcaaacaagaagaagaagaagaaggcggtcgtagaggagggtccagtcatc
ccctaccacttcaccgtgtctactgctatggaccctgacgccagcaccacagccagggtt
tatgtcatcgtcatgggacccaatgacattgagacggagcgtctgtggctggacctgcct
gaggggaagaagagcttcgctgctgggaccatggagaacttccagtgttacggaactgac
gtgggagagatcaagagggtggagctaggtcataatggggcaaccccagagagctgctgg
ttggtggacgagctgtcggttgctgtgccgaccaaaggcatcaagtacatcttccagtgt
aagtgctggttggccaaggacagaggcgacggtctcaccggcagactgttcaacgtacta
gatgccaacagtatcaatatcgtccggaagatcatctatgtggccacggtcatcacaggc
gacacccaggatgcagggacggacaccaacatcttcctgtctgtgtttggagccaatggg
agcacagaggagatgctgctgcccaagaatgaggacaggtttgagagaggtcaagaggac
acgtttaacctggagatagatgacatcgctcctctgaagaagatcagggttcgcatcgac
ggctctgggagtcgccctgactggttcctcgacaggatcgtgatgcataacctgactaca
gaggaggtgtctgtgtttaccaatgagaactggctgtcgaagaccaaagggcccaaaagg
actaagatctgtgagctggcagcggtggtggatgaggaggagatggtggagaggaccacc
tacatcatccaggtccagaccagcgacatcggaggcgcgggcactgatgccaacgtgttc
ctgatagtgtttggggagaacggagacactggtacgctggcactaaaggagggcggtagc
agaaacaagtttgagcggaagtcaaaagacgtgttccgcttcccagacatcctcagcctg
ggagagctttccaagatccgcgtatggcatgacaacaagggtcctgctccgggttggcac
ctggagtacattgatgtgaaagatgagaccatggaccagaatttccgtttcccatgtggc
cgctggctggccaagaatgtggacgacgggcagatcatgacagagctggcctgtgccaac
aacgacatcctagacttcagtgacaagaccaaatatgaaattgccactacaacagctaac
actgatggcgcagacaccaaggagaatgtgtggatcgtgctggaaggaaagaggggacgt
tcaaaggagtttgtgctggagaatagttcaaagaaaaagaggttcctttgtggagccaca
gacacatttgagttttcctccaagcatgtgggtgacatagctggcatctgtgtggggcac
acgactaaagacagcaagaaggtgaagggtgaggccttctggcacgtcctggaagttgtg
gtgacagagaagggacttggaaacaagtatttattccactgtgatgcccagatccctcta
gcagccaaacgggacaagtttctgaccttcgaatgctttaagaccattgagagctttgcc
agcaaggtccgcagcctcgtgcccgtcaaatacgagataatcgtcatcaccggcgacgtc
aaaagggccggaactgactctaacgtttacatcaccatatatggctccaatggggattct
ggaaagcgtgccttaaagcagaagttccgaaacctttttgagcggggacaaacagatcgt
ttcattctggagatgttggatttaggggagctgctgagggtcaaagtggagcatgatggc
tcaagccacaactctggttggtacctggagtgtgtagaggttaccaacacagccaactcg
gtgaccactatcttcctgtgtgggaagtggttggaccctcagaaggcagatgggcagata
caaagagtgctctaccccaaatactga
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integrated database retrieval system
