Salvelinus namaycush (lake trout): 120051999
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Entry
120051999 CDS
T07522
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03018
RNA degradation
snh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120051999
09123 Folding, sorting and degradation
03018 RNA degradation
120051999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120051999
03041 Spliceosome [BR:
snh03041
]
120051999
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120051999
mRNA degradation factors
5'-3' decay
Lsm complex
120051999
Spliceosome [BR:
snh03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
120051999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
120051999
NCBI-ProteinID:
XP_038854808
UniProt:
A0A8U0Q6I8
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All DBs
Position
Sna8:complement(63788734..63790728)
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AA seq
80 aa
AA seq
DB search
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAVEQTEEYVNGQLKNKY
GDAFLRGNNVLYISTQKRKM
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcagaaagcagacccccagtgactttctgaagcagatcattggcagaccagtt
gtggtcaagctcaactctggagtggattacagaggtgtcctagcctgtctggatggctat
atgaacattgcagtggagcagacagaggagtatgtcaatggccagctgaagaacaagtat
ggtgacgccttcctgagaggaaacaatgtgttatacatcagcacccagaagaggaagatg
tga
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