Salvelinus namaycush (lake trout): 120052040
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Entry
120052040 CDS
T07522
Name
(RefSeq) zinc finger and BTB domain-containing protein 7A-like
KO
K10494
zinc finger and BTB domain-containing protein 7
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120052040
04121 Ubiquitin system [BR:
snh04121
]
120052040
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
120052040
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120052040
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_15
BTB_KLHL33
zf-C2H2_16
zf-C2H2_6
zf-met
Motif
Other DBs
NCBI-GeneID:
120052040
NCBI-ProteinID:
XP_038854831
UniProt:
A0A8U0R2A1
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All DBs
Position
Sna8:complement(16031384..16051937)
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AA seq
737 aa
AA seq
DB search
MTRATRKFPVCKSSSTEAAGRALPRHGDRRAGQGLGKGHVLLPSCCYSPRLPTPSFSCPS
PRLPHTLLQLSFTPAAHTLLQLFFSPAAHTLLQLSFTPAAHTLLQLSFTPAAPHPPSTGR
RTDGRTDTRAAAVIGGSAAGWWKMSLGAGGRGGRRLRGTGGGGGGRGEAAEEGLVGIPFP
EHSADILGSLNKQRLSGLLCDVLLVNQEKEFPAHRSVLASCSPYFYKLFTSGPTADQQHV
YSIDFVAAEALGALLDFAYTATLTVSHSSVGDILAAAHLLEISPVQEVCTHLLDTKVLSP
PAGSERGEEEDDDEVEQGNRLRAQEYLQYFQRGAHWSSSCSTPELRDMPTHLHFNHGNGA
QSNGAPSGPREYYSPLDLALTQAPTQDPEDEEDEDEEDEGEVEHSESGGDMLAWARGNGG
GPGASFYVPAQNGHFYLPTKPKLETEEEGEEEGGQDGERGSASALLQKMMDSIERQKERA
AAGEELGEGEDPDVEFYLNYFNSTQHEDAAAAVSQGLLPLWTARGSSSRERERGGGEGGG
KGGEERGGGGERKMRSKAFQKCPICSKVIQGAGKLPRHIRTHTGEKPYECAICKVRFTRQ
DKLKVHMRKHTGEKPYLCTQCGAAFAHNYDLKNHMRVHTGLRPYQCSSCFKTFVRSDHLH
RHLKKDGCNGIPSRRGRKPRVRDPGLLEVPVGLAGPGPRSVRGRRRMEAASAAAVEGASR
AHAHSPQPQEMAGEPGD
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgactagggccactcggaagtttcctgtctgcaaaagctccagtactgaggcagcaggc
agggccctacccagacacggagacaggagagccggacagggcctggggaagggacacgtg
cttctgcccagctgttgttattctccccggctgcccacaccctccttcagttgtccttca
ccccggctgccccacaccctccttcagttgtccttcaccccggctgcccacaccctcctt
cagttgttcttctccccggctgcccacaccctccttcagttgtccttcaccccggctgcc
cacaccctccttcagttgtccttcaccccggctgccccacaccctccttcaacaggcaga
cggacagacggcaggacggacacgcgggcggcggctgtgattggcggctctgcggcaggc
tggtggaagatgtcgttgggagccggcgggaggggcgggcggcggctcaggggcactggg
ggtggaggaggagggagaggggaggcggcggaggagggcctggtgggcatccccttcccc
gagcacagcgcagacatcctgggcagcctgaacaagcagcgcctcagcggcctgctgtgt
gacgtgctcctggtcaaccaggagaaggagttccccgcccaccgctcggtcctggcctcc
tgcagcccatacttctacaagctgttcacctctggtccaactgccgaccagcagcacgtc
tactccatcgactttgtggcggccgaggccctaggcgccctgctggactttgcctacaca
gccacgctgaccgtcagccacagctccgtgggagacatcctggccgctgcccacctgctg
gagatctcgcccgtccaggaagtctgcactcacctgctggacaccaaagtgctctccccg
ccggcgggcagtgagcgaggagaagaagaggatgatgatgaggtggagcaggggaatcgg
ctgcgggcccaggagtatctacagtacttccagagaggggcccactggagcagcagctgc
agcacgccagagctcagggacatgcccacacacctgcactttaatcatggcaatggggcc
caaagcaacggggcccccagcggccccagagagtactactctcccttggacctcgccctg
acccaggcccccacacaggaccctgaagatgaagaggatgaggatgaggaggacgaaggg
gaagtggagcactctgaaagtggcggggacatgctggcctgggccaggggtaacggaggg
gggccaggggcctctttctacgtcccagcccagaacggacacttttacctcccaacgaag
cccaaactggagacggaggaagagggggaggaagagggggggcaggatggagagaggggc
tcggccagcgccctcctgcagaagatgatggactccatcgagaggcagaaggagcgggcc
gcggccggggaggagctgggggagggagaggacccggacgtggagttttacttgaattac
tttaatagcacgcagcacgaagatgccgctgccgccgtctcacagggactgctgcccctc
tggacggcacggggcagctctagccgagagagagagagggggggaggagaggggggagga
aagggaggagaagagagagggggcggaggggagaggaagatgcgctccaaggccttccag
aagtgccccatctgctccaaggtcatccagggtgcaggcaagctaccccgccacatccgc
acgcacacgggagagaagccctatgagtgcgccatctgcaaagtgcgcttcaccaggcag
gacaagctcaaggttcacatgcgtaagcatacgggagagaagccttacttgtgcacgcag
tgcggtgctgcgttcgcccacaactacgacctgaagaaccacatgcgcgtgcacacaggc
ctgcggccctaccagtgctccagctgctttaagacttttgtgcgttcagaccacctgcac
cgccacctcaagaaggacggctgcaacggcatcccctcccgccgcggccgcaagcctcgt
gtgcgggaccccgggctcctggaggtccctgtggggctggcgggccccggccctcggagt
gtcagggggagacggcgcatggaggcggcttcagctgcggcggtggagggggcctccagg
gcccatgcacacagtcctcagccccaggagatggcaggggagccgggggactga
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