Salvelinus namaycush (lake trout): 120052062
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Entry
120052062 CDS
T07522
Name
(RefSeq) oxysterol-binding protein-related protein 1-like
KO
K20174
oxysterol-binding protein-related protein 1/2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120052062
Membrane trafficking [BR:
snh04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
120052062
Endoplasmic reticulum (ER) - Golgi transport
Others
Oxysterol-binding proteins
120052062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Oxysterol_BP
RIIa
Motif
Other DBs
NCBI-GeneID:
120052062
NCBI-ProteinID:
XP_038854850
UniProt:
A0A8U0R4E0
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All DBs
Position
Sna8:complement(19837873..19868881)
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AA seq
1150 aa
AA seq
DB search
MSYSYPAKVNVPPGLRTLLEGLSRAVVKRRPDYISQFAQLYFAELLRFRTVQNESATAVS
SGGPYVQPCGAYPPVGIFPTLPSIPGVEEQGAEQPWIHSQDILYTVSTLPGLSDSNEASE
VTSLASQYLNDNGLQSLLQTVISNVSPHPISAEQTDDVVVFRRKSSTDCMTADCDINSAA
SDRTRRTESALFERIPLSEIDLISNAVLIRTPYVPCEYMIVVQSDNVPETIVFQRDSSVS
KKMRNARAAAGGAATGAPGNAQSDCTPCLTLPTAPSQMVKDQPATKLVTPLVVTEDPQLF
DSQRPCDTAPTAAMPEFQYVRPEACGSSWRLCHLARPEFMAGMPTAVACPGGSRTVIGHG
QEQGYLPDQANLPMHQDFGPRFSSHHIHMCGANLFQTLCPMSGAYMPVKPPDHRCCQAAP
DVVLPHYALINSPTHGVASYLCPTPSSMQPQGFAYDSVHMYGPHSETVNAMSSTFNPQDA
DKREIPGIRSGPVTSAEAREPDELPDVPEPVWLDAMEEYSAYSTHYCSRVQGSEEDEEGV
MSVGELTESLQSAEACHQKLEKEVRAFLSLVKEDGLPEKLPPMMLQKMREVCELSSETCS
NLNHCLSLFSRQDGVRSLKLEQEVEKNNILSEELQTLATEQHKLEQSVVKGSSPRSALSD
DDFYDAVSDSDSEHSLSVFEAVASHSFDKDEEKGSVLFSSKRSSPTSMSLENHHGNEEES
QPNGIVRHRTSLPASMFSRNDFSIWSILRKCIGMELSKITMPVIFNEPLSFLQRLTEYME
HTYLIHQANASSDSIERMKCVAAFAVSAVASQWERTGKPFNPLLGETYELVREDLGFRLI
SEQVSHHPPVSAFHAEGLKKDFVFHGSIYPKLKFWGKSVEAEPKGIITLELPKYNEAYTW
TNPTCCVHNIIVGQLWIEQYGNVEVLNHKTGERCCLNFKPCGLFGKELHKVEGYILDKSK
KKVCSLYGKWTECMYIVDYAALEAHKRSGKGTAEKKSSKPGSREEVEEIPLPEADTVEVI
PGSYLLWRIAPRPVNSTEMYSFTSFAMQLNELDKDMDGLIPKTDCRLRPDIRAMENGDID
LASEEKKRLEEKQRAACKTHSKSDDEWKTKNPSLGPRWFQQGQNPHNGSQDWLFSTGYWN
RNYPLLPDIY
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacagctatcccgccaaagtcaacgtgcctccgggcttgaggacgcttttggaa
ggcctcagtcgggcagtagtgaaaaggcgtccagattacatctcacagtttgctcagttg
tactttgctgagctcttgcgcttcaggacagttcagaatgaaagtgccacagcagtctct
tctggtggtccatatgtccaaccatgtggagcttaccctccggtcgggattttcccaacc
cttcccagtattccaggagtggaggagcagggtgctgagcagccctggatccacagccag
gacattctgtacaccgtctcaacattgcctggtctatcagactccaatgaagcttcagaa
gtaacctccctagcaagccaatacctcaatgacaatggccttcagagccttctgcagaca
gttatctctaacgtctcccctcaccccatctcagcagagcagaccgatgatgtagttgtc
ttccgcaggaaatccagcaccgactgcatgacggctgactgtgacatcaactctgctgct
tcagaccggacccggcgaaccgagtcagctctcttcgagaggatcccactgagtgagatc
gatctcatatccaatgctgttctgatcaggacaccttatgtgccctgtgagtacatgatt
gtggtgcagtcagacaacgtcccggagaccatagtgtttcagagagactcatcagtcagt
aagaaaatgaggaatgctcgagcagcagctggtggtgctgccactggtgcaccgggcaac
gcccagtctgactgcacaccctgtttgaccctgcctacagccccatcacaaatggtcaaa
gatcagccagccaccaaattggtcacgcccttagtggtgactgaggaccctcagcttttt
gattcacaaaggccatgtgacacagcgcctactgcggccatgccagagttccagtatgtt
agacctgaagcatgtggtagcagctggagactctgccacctggcacgccctgagtttatg
gccgggatgccaacagctgtggcttgcccaggaggatctaggactgtgattggccatggg
caagagcaaggctacctccctgaccaggccaacttgccaatgcaccaggactttgggccc
cggttcagctcccatcacatacatatgtgtggtgccaacttgtttcaaaccctctgcccc
atgagtggtgcctacatgccagtcaaacccccagaccatcgctgctgccaggctgcccct
gatgtggtccttccacactatgcactgatcaacagcccaactcacggtgttgcttcttat
ctttgccctactccatcatccatgcagccccagggttttgcctatgattctgtccacatg
tatggtccccacagtgaaactgtaaatgcaatgtcatccaccttcaatccgcaggatgcc
gacaaaagagagatccctgggatcaggagcggaccggtcacctctgctgaagcgcgggaa
cctgacgagctgcctgacgtgccagagcctgtgtggctggacgctatggaggaatactct
gcctacagcacacactactgctctcgggtgcagggcagcgaggaggacgaggaaggagtc
atgagtgtgggagagctgacagaatcactacagtcagctgaagcttgtcaccagaagctg
gagaaggaggttagagcattcctctccttggtgaaggaagatggacttccagagaagcta
ccgcccatgatgctgcagaagatgagggaggtgtgtgagctgtccagtgaaacttgctcg
aatctcaaccactgcctcagcctcttctccagacaggatggggtgcgcagtctgaaattg
gagcaggaggttgagaagaataatatcctgtctgaagagcttcagactctggctacagag
cagcacaaactagagcagtccgttgtcaagggctcctctccacggagcgcgctcagtgat
gatgatttctacgatgctgtgtctgattcggactcggagcactctctgagcgtctttgag
gcggtggccagtcattcgtttgacaaggacgaggagaaaggctctgtcctgttcagcagc
aagcgcagcagcccaaccagcatgtctctggagaatcaccatggcaatgaggaggagtcc
caacccaatgggattgtgaggcacagaacaagtttaccagcatccatgttctccagaaat
gacttcagcatctggagtatcctgaggaaatgcattggcatggagctgtctaaaattacc
atgccagtgatttttaatgagcccctgagcttccttcagcgtctgacagagtacatggag
cacacgtacctcatccaccaggccaacgcctcctctgactccatagagaggatgaagtgt
gtggcagcgtttgctgtgtctgctgtggcttcgcagtgggagagaactgggaaacctttc
aacccgctactaggagagacctacgaactggtcagagaggacctggggttcagattgatc
tcagagcaggtgagccaccatccaccagtcagtgcgttccacgccgaaggcctgaagaaa
gactttgtgttccatggctccatctaccccaaactcaagttctggggcaagagcgtggag
gctgaacccaaaggcatcatcacactggagcttcccaagtacaatgaggcctacacatgg
acaaaccctacatgttgtgtccacaacatcatcgtggggcagctgtggattgagcagtat
ggcaacgtggaggtgctcaaccacaaaactggagaaagatgctgtttgaatttcaaaccc
tgtggcctttttggcaaggaattgcacaaagttgaaggctacattctggacaaaagcaaa
aagaaggtctgttctctctacggaaagtggacagagtgtatgtacattgtggattatgct
gcattggaggcacataagagaagtgggaaggggacagcggaaaagaaaagcagcaaaccg
ggctctcgtgaggaagtggaggagatccccctaccagaggctgacacagtcgaggtcatc
ccaggcagctatctcctttggaggatagcccccagaccagtcaactctacagagatgtac
agcttcacgtcgtttgccatgcaactgaacgagctggataaagatatggatgggctcatc
ccaaagacagactgcaggcttaggccagacatacgagccatggagaatggagatattgat
cttgcaagtgaggagaagaagagactagaagagaaacagagagctgcatgtaaaacccat
tccaaatctgatgacgagtggaaaacaaaaaacccttccctcggccccaggtggtttcaa
cagggccagaatccccacaatggctcccaggactggttgttctccactgggtactggaac
cgcaactatcccctgttacctgatatttactga
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