Salvelinus namaycush (lake trout): 120052091
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Entry
120052091 CDS
T07522
Name
(RefSeq) carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein-like
KO
K16513
carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120052091
Membrane trafficking [BR:
snh04131
]
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
120052091
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4628
PID
AKAP7_NLS
FF
Motif
Other DBs
NCBI-GeneID:
120052091
NCBI-ProteinID:
XP_038854872
UniProt:
A0A8U0R654
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Position
Sna8:complement(28777138..29021074)
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AA seq
755 aa
AA seq
DB search
MPAKTKYNLVDDGHDLRIPMHNEEAFQHGINFEAKYIGSLDVARPNSRVEIVAAMRRIRY
EFKVKNIKKKKVNIIVSVDGVKVALRKKKKKKEWTWDESKMMVMQDPIYRIFYVSHDSQD
LKIFSYIARDGQNNVFRCNVFKSKKKSQAMRIVRTVGQAFEVCHKLSLQHTHQNADGQED
ADSDKTCNEESTLSARELTGSEKLVVAVETDIDAEEAPLPLPDSTVEEFNRGVTDLDGVY
ATAKTDHTHLNNLDKKVPEEASLLLASPRMLLPSSGTLLNSAPLSVHHQIQLLQQQLQQQ
QQQTHVAVAQVHLLKDQLSAEATARLEAQARVHQLLLQNEDLLQHISLLVKQIQELEVNM
SGPRSMGSQDSLLEITFRSTVPPVLCDPMTPRLQDHASLTLPALGINMGVGQDRTVNPLF
SSSLPLGSPLVDQSMFENSNASRAPGQGLQASRLIQASARRSLVTANPALGSSPAEAPSS
TTTNGGQQRLKNALNLGKAVGAKVNDLLRRKEPSHIGDIGVTEVNKNVGAVWSNMEEMTQ
RTTVNSHASLDSFPRLEPPPPGKKKRLPRTLKTTQDMMISSDPVVTTPPETPDHSLLSSP
NKTSLISNEQTPPKGEQDGENDRGRDTLTGLTGTLDSEREEVEVEMETNGSSKMDGVEGN
ETEERREGEQTQIQLQLSVPDLIHKDHVVPPRSRTSEPRQKAPGADTRLASTPLKAPYRI
SLSVREDGLMENSSLCRKGSAVTDTEEPEQHPDLL
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgaaaacaaagtacaatcttgttgatgatggccatgatttgagaattccaatg
cataacgaggaagcattccaacatgggatcaacttcgaagcaaagtacatcggcagtctg
gacgtggctcggccgaacagcagagtggagattgtggctgctatgaggagaatacggtat
gaattcaaagtgaaaaacataaagaagaagaaggtcaacatcatagtctcagtggatgga
gtgaaggtggcactaagaaaaaagaaaaaaaagaaggagtggacgtgggatgagagtaag
atgatggtaatgcaggatcccatttacaggatcttctatgtatctcatgactcccaggac
ctgaagatcttcagctacatcgccagagatggacagaataacgtcttccgctgtaacgtc
ttcaagtccaagaagaagtcccaggccatgcgtattgtgcggacggtgggccaggcgttc
gaggtgtgtcacaaactcagcttgcaacacacacaccagaacgcagatggacaggaggac
gcagacagcgacaagacctgcaacgaggagtccacactctcagcccgtgagttaacagga
tcggagaagttggtggttgctgtggaaacagacattgatgcggaggaggctcccttacca
ttaccggacagtacggtggaggagtttaaccgcggggtcactgacctggacggagtgtac
gctactgccaagactgaccacacacacctcaacaacctcgacaagaaggttccagaggag
gcctctctgttgctggcgtcccccaggatgctgctgccgtcgtcgggtactctgctcaac
agtgctcccctgtcagtccaccaccagattcagctgctacagcaacaactacagcaacaa
cagcaacagacacatgtagctgtggcacaggtgcacctgttgaaggaccaactgagtgcg
gaggctacagccagactggaggcccaggccagagtgcatcagctgctgctccagaacgag
gacctgctgcagcacatctctctactggtcaaacagatccaggaactggaggtcaacatg
tctgggcccaggtccatgggttcccaggacagtctattggagatcactttccgttccacc
gtccccccagtgttgtgtgacccaatgacccctcgactccaggaccacgccagcctcacc
ctgccagcgctgggaatcaacatgggcgtgggccaggacaggacggtcaacccactcttc
tcttcctccctgcccctgggcagccccctagtagaccagagtatgtttgagaactccaat
gcctccagagctccaggccaggggctccaggcctccaggttgatccaggcctcggcccgt
cgctccctggtcacagctaaccctgcccttggtagcagccctgccgaggccccctcctcc
accactaccaatggaggtcagcagagactgaagaacgccctgaacctgggcaaggctgtg
ggggcaaaggtcaacgacctgctgcgaaggaaggagcccagtcatataggagacatcggt
gtcacagaggtcaacaagaatgtaggagcagtctggagcaatatggaggagatgacccag
cgaactactgtcaatagtcatgcctctctggactccttccctcgtctggaaccccctcct
cccggtaaaaaaaagcgtcttcctcgcaccctgaagactacccaggacatgatgatctcg
tctgaccccgtcgtcaccacaccccccgagacccccgatcactccctcctctcctccccc
aacaagacctccctcatcagcaatgagcagaccccacccaagggagagcaggacggagag
aatgacagagggagagacacactcaccggactgactggcactttggacagcgagagggaa
gaggtggaggtggagatggagacgaatgggagcagtaagatggatggagtggaagggaat
gagacagaggagaggagagagggagagcagacccagattcagctccagctctctgtccca
gacctcatccataaggaccacgtggtcccccccaggtcgaggacgtctgagcccaggcag
aaggccccgggagcagacaccaggctagcctccacccccctaaaagctccgtacaggatc
agtctgagtgtgcgtgaggatgggctgatggagaacagctccctctgtaggaaaggatca
gcagtcacagacacagaggagcctgaacaacaccccgacctgctttga
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