Salvelinus namaycush (lake trout): 120052102
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Entry
120052102 CDS
T07522
Name
(RefSeq) cadherin-2-like
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120052102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120052102
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120052102
04090 CD molecules [BR:
snh04090
]
120052102
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
120052102
Cell adhesion molecules [BR:
snh04515
]
Cadherins
Major cadherins
120052102
CD molecules [BR:
snh04090
]
Proteins
120052102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
DUF2304
Cytomega_TRL10
Cadherin_4
DUF3139
DUF2254
Stevor
Motif
Other DBs
NCBI-GeneID:
120052102
NCBI-ProteinID:
XP_038854882
UniProt:
A0A8U0R4D0
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Position
Sna8:complement(33504303..33553652)
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AA seq
870 aa
AA seq
DB search
MYISLGQVRFADCGLGDRVLLEVVDVEDFRLDEDGTVYARHAFRLADRKSALVVRARDLE
TKEDWKTHVYLLLRNDRKRETTEHKLIKQVNSSSAAVTQHAREIVFPWHSLVVGDDGSLR
RVKRDWVIPPINVPENSRGQFPEELVRIRSDRDKNSLLRYSVTGPGADQSPTGIFIINPI
SGQLSVTKPLDREQISNFHLRAHAVDLNGNQIENPIDIVINVIDMNDNRPEFTHTIYNGS
VPEGSKPGSFVMTVTSLDKDDPKTANGMLRYKIISQNPENPSSNMFTINNKTGGIITVAA
GLDREKVPQYTLIIQATDMEGNPTYGLSNTATAIIRITDVNDNPPEFTADKFYGEVQENR
VNVIVANLTVTDKDQPHSAAWSTVYRITAGDPTGRFSIPTDLTTNEGLVTVVKPIDYEVS
RSFVLTVLAENEVSLARGIHLPRQSTATVSVRITDVNESPEFSPNPKVIKLEEGLPGGSL
LTTFTAQDPDRYMQQNIRYAKVFDPANWLKIDPVNGRISTIAVLDRESPYVKNNLYNITF
MATDNGIPPASGTGTLQMYLLDINDNAPRVFPPEVEMCEKPEPNTINITASDPDLTPNAG
PFAFELAKRPADARRNWTLTRLNGEYAQIRLRIGFLESGIYEVPIIITDSGNLPMSNTSY
LQVKVCQCDHHGDCVDMERIIAAGLGTGAIIAILICIIILLVMVLFFVMWMKRRDKERQA
KQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDALETEKVKVGIRRMDERPLHQ
DHLYPLRSAAPHPGDIGDFIHEGLKAADNDPTAPPYDSLLVFDYEGSGSTAGSLSSLHSS
SSGGDQDYDYLSDWGPRFRKLADLYGGEDN
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgtacatctctctcggacaagtgaggttcgcagactgtggcctgggtgacagggtgctg
ttggaggtggttgacgtggaggacttcaggctggatgaggatggcacggtgtacgcccgg
catgccttccgtcttgccgacaggaagagcgccttggtggtgcgagcgagggatctggag
accaaggaggattggaagacgcatgtttacctcctcctccggaacgacagaaagcgagag
acgacagaacacaaactcatcaaacaggtgaactccagctctgcagctgtgactcagcat
gcgcgagagatcgtgtttccatggcacagcttggtcgttggggacgatggatctctgagg
cgggtgaagagggactgggtcattccccccatcaacgtccctgagaactcacgaggacag
ttccccgaggagctagtcaggatccggtcggaccgtgataagaacagtctcctgcgttac
agtgtgactggacccggtgctgaccagtctccgaccgggatcttcattatcaaccccatc
tctggccagctctctgtgaccaaacccctcgaccgggaacagatctccaacttccatctg
cgagcccatgctgtggacctgaatgggaaccagatagagaaccccatagacatcgtcatc
aacgtcatagacatgaatgacaacagaccagagtttacacacaccatctacaacggatca
gtaccagagggatccaaaccagggtcctttgtgatgacagttacttcactggacaaggat
gacccgaaaacagccaatgggatgctccgatacaagattatatctcagaaccctgaaaac
ccctcctccaacatgttcaccatcaacaacaagacaggaggaatcatcactgtggctgca
gggctagacagagagaaagttcctcagtacacgttaatcatccaggctactgacatggag
gggaacccaacctatggcctgtctaacacagctacggctatcatcagaatcactgacgtc
aatgataaccccccagagttcaccgctgacaaattctatggagaggtgcaggagaaccgt
gtgaatgtgatcgtagctaatctgacagtaacagataaggaccagccccacagtgcagcc
tggagtactgtgtacaggatcacagctggagaccccactggacgcttctccatccccact
gacctcaccaccaatgagggactggtcactgtggttaagcctatagactatgaggtgagt
cgttccttcgtgctgacggtactggctgagaacgaggtttccctggcccgtggtatccac
ctgccccgtcagtccaccgccaccgtgtctgtacgcatcacagacgtcaacgagagccca
gagttctcccccaaccccaaagtcatcaaactagaggaggggctaccgggcggctcgcta
ctcaccacctttacagcacaggaccctgacagatacatgcaacagaacatacggtacgcc
aaggtgttcgaccctgctaattggctgaagatagaccctgtaaacgggcggatctccacc
atcgctgtgctggacagagagtctccatatgtgaagaataacctctacaacatcaccttc
atggccactgacaatggcatccccccagccagtggtacaggtacattacagatgtacctg
ttggacataaatgacaatgctcctcgtgtcttccctccggaggtggagatgtgtgagaag
cctgagcccaacaccatcaacatcaccgccagtgaccccgatctgacccctaacgccggc
ccctttgccttcgaactggccaagcgtccggcagatgcacgcaggaactggaccctcaca
cgcctcaatggtgaatatgctcagatcaggctgcggataggttttctggagagtggtatc
tacgaggttcctatcatcatcacagactcaggcaacctgcccatgtccaatacatcctac
ctgcaggtcaaggtgtgtcagtgtgatcaccatggagactgcgtggacatggaacgcatc
atcgcagcagggctgggcactggagccatcatcgctatcctcatctgtatcatcatactg
ctagtgatggtgttgttctttgtgatgtggatgaagaggagggataaggaacgtcaggcc
aagcagctgctcatcgacccagaggacgatgtcagagacaacatactgaagtacgacgaa
gaaggaggaggagaggaggaccaggactatgacctgagccagctgcagcagcccgacgcg
ttggagacagaaaaggtgaaggtggggatccgacgtatggatgagaggcccctacaccag
gaccacctgtaccccctccgttctgctgcaccccaccccggagatataggagacttcatc
cacgagggtctgaaggcagctgataatgacccgacagcgcctccctacgacagtcttctg
gtgtttgactatgaaggcagtggctccaccgctggctccctcagctcccttcactcctct
tcttccggcggagaccaggactacgactacctcagcgactggggcccgcgcttccgcaag
ctggcagacctctatggtggagaggacaactag
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