Salvelinus namaycush (lake trout): 120052166
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Entry
120052166 CDS
T07522
Symbol
usp53b
Name
(RefSeq) inactive ubiquitin carboxyl-terminal hydrolase 53
KO
K27919
inactive ubiquitin carboxyl-terminal hydrolase 53
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120052166 (usp53b)
Cilium and associated proteins [BR:
snh03037
]
Other cilia and associated proteins
Stereociliary proteins
120052166 (usp53b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
120052166
NCBI-ProteinID:
XP_038854926
UniProt:
A0A8U0UKF5
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Position
Sna8:complement(48249108..48296681)
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AA seq
1031 aa
AA seq
DB search
MACQLPLPSMSSCGKPPPLSGEGAGSNSLAWVKLFKKPGGVGGGGGLGKSYQPGSMLSLA
LTKGLLNEPGQNSCFLNSAVQVLWQLDIFRRSLRQLPGHFCLGDACIFCALKSIFSQFQE
SRERALPSDSLRHALAETFKDEQRFQLGHMDDAAECFENILERIHLHIVSDTATEACTSK
SCITHQKFAMTLYEQFVCRSCGASSDPLPFTELVHYVSTTALCQQVGHVLGKNDRLRSDM
FGELLQAANTIGDLRNCPSNCGQSIKIRRVLLNCPEIVTIGFVWDAEQSDLTEDVVRSLG
PHLNLSGLFNRVTDENAKRSELRLVGMICFSSKHYSAFAYHTKSSKWVFFDDATVKEIGS
KWKDVASKCIRGHFQPLLLFYTNLEGTPVSSEDAPRQTTMCPRFKSNVNGEVPAGMKKLD
AVREKAGPLRSKQGPYKQMLPPPSTSGYKRVKGPPASPNTFRDPSKETSQRVVEGIKKEA
ERGHRKLDPHKDMAYARSPSEGGLRQHADQRLRGGSGARADKLSSSHQNRASQDPRSQSG
APGGHSWRQETSPGRQEQDCSQDAWEKGGGSGAGRNKAKPSWRPIREVLNVDSVLNDLER
RQQQQQHGGSGSPRLSKPSCQERPHERKQQKCLMTIYEDEQRQETESHSSLESEGSGGGR
AKGGPKALLRSDTWTIQRTESGYESSDRLSSGSTNPDSPGVDSFVGKEQRLTPEVQSQRR
KCRYSSGSSKKGAGPERDASSSDNRSSHMMGSPEMSNNNRGGHHGDSPAVRRLGKTSSSE
WNSSDDLAGNLSEPEDSAYRSSNIKPLLSESPCPCPPHHLAFHQPPHIELEEPSSQHQPS
MPPLPHPKAAQRASPHQGDVGRHCFRPRLLQEPSQTSPRPSVRPTPASHTPSPNQRSEFN
GPLQRPSSGASSKSGSDPERSNPSSGESEERLPICRPPGPESAVAQGVSLTTYFSVDNCM
TDTYRLKYHHQRPLLLSAIVPKAPTEPREHPSHHLHPANTHSMLDPPKTRPDAVFPSLLK
SLPDSPSKILA
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggcctgccagctccctcttcccagtatgtccagctgtggcaaacctcccccactctcc
ggagaaggggcaggctctaactctctggcatgggtcaaactcttcaaaaagcctggaggt
gttggtggtggtgggggtctggggaagtcctatcagcctgggagcatgttgtctctggct
ctcaccaaaggcctgctgaacgaaccaggccagaatagctgcttcctcaacagtgccgta
caggtgctatggcagttggacattttcaggaggagtttgagacagcttcctggtcatttt
tgtctaggggatgcctgcattttctgcgctttaaagagtattttcagccagttccaggag
agccgagagcgagcgttgccttcagatagcctgcgccacgcccttgctgaaacctttaag
gacgagcaacgcttccaactaggccacatggacgacgctgcagagtgctttgagaacatt
ctggagagaattcacctgcacatagtttctgacacagcgactgaggcctgcacatccaag
tcctgcattacccaccagaagtttgccatgacactttatgaacagtttgtatgtcgtagt
tgtggcgcctcctcggacccccttcctttcacagagctagtgcattatgtctccaccaca
gccctatgccaacaggtgggccacgtcctggggaagaacgacaggcttcggtcggacatg
ttcggggaattgctgcaggcggcaaacaccatcggtgacctacggaactgtccgagcaac
tgtggccagagcatcaagatccgtcgggttctcctgaactgcccagagatcgtcaccatt
ggctttgtgtgggacgcagagcagtctgaccttacagaggatgtggttaggtcactgggt
ccacatctcaacctctcggggctgttcaaccgggtcactgatgagaacgccaaaaggagt
gagttacgtctcgtgggaatgatttgtttctccagcaaacattactctgcgttcgcttat
cacaccaagtcctcaaaatgggtcttctttgatgacgccaccgtgaaagagatcggatcc
aagtggaaagacgtggcctctaaatgcatccggggacatttccagccactgctcctgttc
tacactaacctggaggggaccccagtttccagcgaggacgcgcccagacaaacaaccatg
tgtccccgctttaaatccaacgtcaacggggaagtgccagcagggatgaagaagctggat
gccgtccgggagaaagcaggcccactccgctccaaacaggggccctataagcagatgcta
cctccaccctccacctcaggctacaaaagagtgaaaggcccacctgctagtcccaacaca
ttccgggatccttccaaggagacttcccagagggttgtagaagggataaagaaagaggcc
gaaagagggcatcgaaaactagacccacacaaagatatggcctatgccagatccccttct
gagggcgggctgaggcagcacgccgaccagaggttgcgaggcgggagtggcgcccgggct
gacaagttgtcatcctcccaccagaacagagcttcccaggacccacgctctcaatccggt
gcccctggcggacacagttggagacaggaaacctcccctggtcgccaagaacaggactgc
agccaggatgcgtgggagaagggtggcgggtcgggagcgggccgcaacaaagccaagccc
tcctggaggcccatccgggaagttctgaacgtggacagcgtcttgaatgaccttgaacga
cggcaacaacagcagcagcacggcggcagtggtagcccccggctctctaaaccctcctgt
caggagaggcctcacgagcgcaagcagcaaaagtgcttgatgacgatttacgaggacgag
cagcggcaggagacagagagccacagctccctcgaatcggagggcagcggcggggggagg
gccaagggtgggcccaaagccctgttgcgcagcgacacctggaccatccagaggactgag
tctggatacgagagcagcgaccggctgagcagcggctccaccaaccctgactcgcccggg
gtagacagctttgtcgggaaggagcagcggttgacaccagaggtgcagtctcagagacga
aaatgtagatacagctccggcagttctaagaaaggagctggtccagagagggacgctagc
tcctcagacaacaggagcagtcacatgatgggatcgccagagatgagtaacaacaacaga
ggtggtcaccatggcgacagccccgccgtgcggcgcttgggtaaaaccagcagctcggag
tggaacagctctgacgacctagctggaaatctctcggaaccagaggacagtgcctaccgc
tccagcaacatcaagccccttctgtccgagtctccctgcccctgtcccccccaccacctg
gccttccaccaacccccccatatcgaactagaagagccctcatctcaacatcagccctcc
atgccgccactgcctcaccctaaagccgcccagcgagcctcccctcaccagggggatgtt
ggccgccattgcttccgtcccaggctactccaagagccctcccagaccagcccccggccc
agcgtccggcccaccccggcctcacatacccccagccccaaccagaggtcggaattcaat
ggccctctgcagaggccctcgtcgggtgccagctccaagtcgggctcggacccagaaagg
agcaacccgtcgtcgggcgaaagcgaggagaggctccccatctgcaggccacctggaccc
gagtcagcggtagcccaaggggtttccctcaccacgtacttcagcgtggacaattgcatg
acagacacgtacagacttaagtaccatcaccagcgacccctcctactctcagctatcgtg
cccaaagcaccaacggagccccgagaacaccccagccaccacctgcaccccgcaaacaca
cactccatgctagacccacccaaaacccggcctgatgcagttttcccctccctgctcaaa
tcactcccagacagtcctagcaagatccttgcttga
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