Salvelinus namaycush (lake trout): 120052194
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Entry
120052194 CDS
T07522
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120052194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120052194
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120052194
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
HECT type E3
120052194
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
120052194
NCBI-ProteinID:
XP_038854955
UniProt:
A0A8U0R4K7
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Position
Sna8:54665475..54674018
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AA seq
1005 aa
AA seq
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MISWGEDSRNGFGLVKPNGLDTTKTDISCVNLIHLKSKIQGLSAGNSVVAFIRNNGRLVS
VARIQEDQDGRRITGKLKSVTCKETIRALSCGDSHAVLLSEEGRVLCLDKANILRPLDNL
CNRQVTQVACGDQHSISLTQDGQVFTWGQNTSGQLGLGWGELSAMSPKPLKSLSGIPLVQ
ITAGGDHSFALSLSGAVFGWGKNTAGQLGLGDTTNRHAPAPVDCLNLKKTVWISCGGEHT
AVLTKGGVVFTFGSGRYGQLGHNSLRDELQPRVVGQLWGSKVTQIACGRHHTLAFVGPSN
KIYSFGHGEQGQLGNGVKIDQSVPLPVQLPDQIDDQKIEHIFAGGNHSFALCTLGQESEE
RSNNLRSSVGKVTQQAIDEEIIDKWISECDSKSWKKGQKEITKMFSSASCLNGSFLDKSC
DKHYQTSPKQSGLDFSLVQGAFRKLAKKDKVLTEVEAVVQHTLLPSLYEEPIGVEGLRVY
LVLPELLRVLHKQHRRTDLTEAVAAAILRLHPDKLQVLGDCWSSLKPSVMTKHIGVWKKV
LSGILRSEHILRTRDPGIKHLLQVLGHLHRANQKSVETQTVPDSTFCMEEVHFKLIFLEE
DVKLWRLWSKQDVDQTPAIFCRYPFLMNLQSKINVFNINAALTQRTGMGPFDMFLMAAPA
PFFELRLNRASLIEDTFHQLSVACPSTFKRSLVVYFDEDAKLTDVYKRDFFLHLFKKLLV
PEFGMFMYNDTETLAWFPAMPRVEEKRYFLFGVLCGMALYNNNMVHLPFPMAFFKKLVNI
KPSLEDLREFSPIEAKGLQNILDCPDDDVENMDMTFSVMWGDVAVELDPKETGKLVTSAN
KKEFVDTYVNYIFNQSVEVVFEEFRKGFFKVCDMDVVEFFQPEELRGVMVGKENFDWETL
KQNTVYEGEYHAGHPNIVTFWEVFEELTEDQKKAFLLFLTGFDRVPILGMNQIRMRVQTL
LNSSQQHFPEALTCHSLLQLPIYPSKETLQSRLIGAVGHNRGFWN
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgatttcatggggagaggatagtcgtaatggctttggtttagtgaagccgaatggttta
gatacgaccaaaacggatattagttgcgttaatttgatacaccttaaatctaaaattcag
ggtctgtccgcaggtaacagtgtggtcgcgtttatcagaaataatgggagactagtgtct
gtcgcacggattcaagaggaccaagatgggagaagaatcacagggaaactgaagagtgtg
acatgtaaggagacgattcgggctctgagttgtggagattctcatgctgttttactgtct
gaagagggccgggttctttgcttggacaaagccaatattctcagaccattggataaccta
tgtaaccgacaggtaactcaggttgcatgtggagaccagcattcaatttcactaacacag
gatggtcaggtgttcacatggggtcagaacaccagcggtcagctgggtttggggtggggc
gagctcagcgccatgtcccccaagcccctgaagtctctatcagggatccccctggttcag
atcactgcagggggagaccacagcttcgctctgtccctttctggagctgtgttcggctgg
ggcaagaacaccgccgggcagctgggactaggggacacaacaaacagacatgccccagct
cctgttgattgcctgaatctgaagaagactgtttggatttcatgtggaggagaacatact
gccgttctgacaaagggaggtgtggtgttcacatttggctcaggccgctatggacagctt
ggacacaactctctccgagatgaactacaacctcgagtggtggggcaactctgggggtca
aaggtgacccagatagcctgtggaagacaccacacattagcatttgtggggccctccaat
aagatctactcatttgggcacggagagcaagggcagctgggaaatggagtaaagattgat
cagtctgtgccccttccagtacaactgccagaccagattgatgaccagaaaattgaacac
atttttgctggaggaaaccattcctttgcattgtgcactcttggtcaggagtctgaagaa
aggtctaacaatctcaggtcaagtgtgggcaaagtgacacaacaagctatagatgaagaa
atcattgacaaatggatctcggaatgtgattcaaagtcttggaaaaaaggacagaaggaa
atcacaaaaatgttttcttctgcatcatgtttaaatgggagctttcttgataaaagttgt
gacaaacattaccaaacctcaccaaaacagtctggtctggatttttcactcgtccaaggc
gcattccggaagctggcgaaaaaggacaaagttttgactgaggttgaagctgttgtccag
cacacactgcttccctccctgtatgaggagcctattggagtggagggcttgagggtctac
ctggttctccctgagctcctcagggtccttcacaaacagcacagaaggacagatctcacc
gaagccgttgctgctgctatcctcagactgcaccccgacaagctgcaggtcctcggtgac
tgctggtcctcattgaagccgtctgtcatgaccaagcacattggggtgtggaagaaggtc
ctgtcggggattctgaggagtgaacatattctacgcactcgtgaccctgggatcaaacac
ctgctccaggtcctcggccatctccacagagcaaaccagaaatctgtagagacccagaca
gttccagacagtaccttttgtatggaggaggttcacttcaaactcatatttctagaggag
gacgtaaagctttggcgtttatggtcaaagcaggatgtggatcagacacctgccatcttt
tgtcgttacccattcttgatgaatctgcagagcaagataaacgtttttaacatcaacgcc
gcactcacacagaggactggcatggggccttttgacatgttcctcatggcggcgcctgct
ccgttctttgagctgaggctgaatagagcatcactcatcgaagacactttccatcaactg
agtgtagcatgtcccagtaccttcaagaggtcccttgtggtgtattttgacgaggatgcg
aagctgacagatgtctacaaaagggacttcttcctccatttgtttaaaaagctgttggtc
cctgagtttgggatgttcatgtacaacgacaccgagacgctggcctggttccctgcaatg
cctagagtggaggagaagcgttatttcctgtttggggttctgtgtgggatggccctgtat
aacaacaacatggtgcacctccccttccccatggccttcttcaagaagctggtgaacatc
aagccctctttagaggacctgagagagtttagccccattgaagcaaagggtttgcagaac
atcttggattgccctgatgatgatgttgaaaacatggacatgactttctcagtgatgtgg
ggtgatgtagcggtggaacttgatcccaaagaaactggaaaacttgtcacaagtgctaat
aagaaggagtttgttgacacctatgtgaactacatcttcaaccagtcagtagaggtggtg
tttgaagagttcaggaaaggcttcttcaaggtgtgtgacatggacgtggtggagttcttc
cagccagaggaactgaggggagtgatggtggggaaggagaatttcgactgggagacgctg
aaacagaacactgtgtatgaaggagagtaccatgctgggcatcccaacatcgtcacattc
tgggaggtgtttgaggaactgacagaggatcaaaagaaagcattcctgttgttcctgact
ggctttgatcgtgtgcccatcctgggtatgaaccagatcaggatgagggtccaaaccctt
ctcaactcctcccaacagcatttcccagaggcgctgacctgtcactctctgttgcagctg
cccatctacccctccaaagagacactacagagcaggcttataggggctgttggccacaac
aggggcttctggaattaa
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