Salvelinus namaycush (lake trout): 120052204
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Entry
120052204 CDS
T07522
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120052204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120052204
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120052204
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
HECT type E3
120052204
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
120052204
NCBI-ProteinID:
XP_038854961
UniProt:
A0A8U0R698
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Position
Sna8:complement(54893857..54902489)
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AA seq
857 aa
AA seq
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MISWGEDSRNGFGLVKPNGLDTTKTDISCVNLIHLKSKIQGLSAGNSVVAFIRNNGRLVS
VARIQEDQDGRRITGKLKSVTCKETIRALSCGDSHAVLLSEEGRVLCLDKANILRPLDNL
CNRQVTQVACGDQHSISLTQDGQVFTWGQNTSGQLGLGWGELSAMSPKPLKSLSGIPLVQ
ITAGGDHSFALSLSGAVFGWGKNTAGQLGLGDTTNRHAPAPVDCLNLKKTVWISCGGEHT
AVLTKGGVVFTFGSGRYGQLGHNSLRDELQPRVVGQLWGSKVTQIACGRHHTLAFVGPSN
KIYSFGHGEQGQLGNGVKIDQSVPLPVQLPDQIDDQKIEHIFAGGNHSFALCTLGQESEE
RSNNLRSSVGKVEAVVQHTLLPSLYEEPIGVEGLRVYLVLPELLRVLHKQHRRTDLTEAV
AAAILRLHPDKLQVLGDCWSSLKPSVMTKHIGMWKKALSGILRSEHILRTRDPGIKHLLQ
VLGHLHRVNVHASLLRTGMGPFDMFLMAAPAPFFELRLNRASLIEDTFHQLSVACPSTFK
RSLVVYFDEDAKLTDVYKRDFFLHLFKKLLVPEFGMFMYNDTETLAWFPAMPRVEEKRYF
LFGVLCGMALYNNNMVHLPFPMAFFKKLVNIKPSLEDLREFSPIEAGGLQNILDCPDDDV
ENMDRTFSVMWGDVAVELDPKETGKLVTSANKKEFVDTYVNYIFNQSVEVVFEEFRKGFF
KVCDIDVVEFFQPEELRGVMVGKENFDWETLKQNTVYEGEYHAGHPNIVTFWEVFEELTE
DQKKAFLLFLTGFDRVPILGMNQIRMRVQTLLNSSQQHFPEALTCHSLLQLPIYPSKETL
QRRLIAAVGHNRGFWNE
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgatttcatggggagaggatagtcgtaatggctttggtttagtgaagccgaatggttta
gatacgaccaaaacggatattagttgcgttaatttgatacaccttaaatctaaaattcag
ggtctgtccgcaggtaacagtgtggtcgcgtttatcagaaataatgggagactagtgtct
gtcgcacggattcaagaggaccaagatgggagaagaatcacagggaaactgaagagtgtg
acatgtaaggagacgattcgggctctgagttgtggagattctcatgctgttttactgtct
gaagagggccgggttctttgcttggacaaagccaatattctcagaccattggataaccta
tgtaaccgacaggtaactcaggttgcatgtggagaccagcattcaatttcactaacacag
gatggtcaggtgttcacatggggtcagaacaccagcggtcagctgggtttggggtggggc
gagctcagcgccatgtcccccaagcccctgaagtctctatcagggatccccctggttcag
atcactgcagggggagaccacagcttcgctctgtccctttctggagctgtgttcggctgg
ggcaagaacaccgccgggcagctgggactaggggacacaacaaacagacatgccccagct
cctgttgattgcctgaatctgaagaagactgtttggatttcatgtggaggagaacatact
gccgttctgacaaagggaggtgtggtgttcacatttggctcaggccgctatggacagctt
ggacacaactctctccgagatgaactacaacctcgagtggtggggcaactctgggggtca
aaggtgacccagatagcctgtggaagacaccacacattagcatttgtggggccctccaat
aagatctactcatttgggcacggagagcaagggcagctgggaaatggagtaaagattgat
cagtctgtgccccttccagtacaactgccagaccagattgatgaccagaaaattgaacac
atttttgctggaggaaaccattcctttgcattgtgcactcttggtcaggagtctgaagaa
aggtctaacaatctcaggtcaagtgtgggcaaagttgaagctgttgtccagcacacactg
cttccctccctgtatgaggagcccattggagtggagggcttgagggtctacctggttctc
cctgagctcctgagggtccttcacaaacagcacagaaggacagatctcaccgaagccgtt
gctgctgctatcctcagactgcaccccgacaagctgcaggtcctcggtgactgctggtcg
tcattgaagccgtctgtcatgaccaagcacattgggatgtggaagaaggccctgtcgggg
attctgaggagtgaacatattctacgcactcgtgaccctgggatcaaacacctgctccag
gtcctcggccatctccacagagtcaatgtccatgcttctctgctaaggactggcatgggg
ccttttgacatgttcctcatggcggcgcctgctccgttctttgagctgaggctgaataga
gcatcactcatcgaagacactttccatcaactgagtgtagcatgtcccagtaccttcaag
aggtcccttgtggtgtattttgacgaggatgcgaagctgacagatgtctacaaaagggac
ttcttcctccatttgtttaaaaagctgttggtccctgagtttgggatgttcatgtacaac
gacaccgagacgctggcctggttccctgcaatgcctagagtggaggagaagcgttatttc
ctgtttggggttctgtgtgggatggccctgtacaacaacaacatggtgcacctccccttc
cccatggccttcttcaagaagctggtgaacatcaagccctctttagaggacctgagagag
tttagccccattgaagcagggggtttgcagaacatcttggattgccctgatgatgatgtt
gaaaacatggacaggactttctcagtgatgtggggtgatgtagcggtggaacttgatccc
aaagaaactggaaaacttgtcacaagtgctaataagaaggagtttgttgacacctatgtg
aactacatcttcaaccagtcagtagaggtggtgtttgaagagttcaggaaaggcttcttc
aaggtgtgtgacatagacgtggtggagttcttccagccagaggaactgaggggagtgatg
gtggggaaggagaatttcgactgggagacgctgaaacagaacactgtgtatgaaggagag
taccatgctgggcatcccaacatcgtcacattctgggaggtgtttgaggaactgacagag
gatcaaaagaaagcattcctgttgttcctgactggctttgatcgtgtgcccatcctgggt
atgaaccagatcaggatgagggtccaaacccttctcaactcctcccaacagcatttccca
gaggcgctgacctgtcactctctgttgcagctgcccatctacccctccaaagagacacta
cagaggaggctcatagcggctgttggccacaacagaggcttctggaatgaataa
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