Salvelinus namaycush (lake trout): 120052206
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Entry
120052206 CDS
T07522
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120052206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120052206
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120052206
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
HECT type E3
120052206
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
120052206
NCBI-ProteinID:
XP_038854962
UniProt:
A0A8U0R6B2
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Position
Sna8:54934173..54942796
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AA seq
1006 aa
AA seq
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MISWGEDSRNGFGLVKPNGLDTTKTDISCVNLIHLKSKIQGLSAGNSVVAFIRNNGRLVS
VARIQEDQDGRRITGKLKSVTCKETIRALSCGDSHAVLLSEEGRVLCLDKANILRPLDNL
CNRQVTQVACGDQHSISLTQDGQVFTWGQNTSGQLGLGWGEPSAMSPKPLKSLSGIPLVQ
ITAGGDHSFALSLSGAVFGWGKNTTGQLGLGDTTNRHAPAPVDCLNLKKTVLISCGGEHT
AVLTKGGVVFTFGSGRYGQLGHNSLRDELQPRVVGQLWGSKVTQIACGRHHTLAFVGPSN
KIYSFGHGEQGQLGNGVKIDQSVPLPVQLPDQIDDQKIEHIFAGGNHSFALCTLGQESEE
RSNNLRSSVGKVTQQAIDEKIIDKWISECDSKSWKKGQKEITKMFSSASCLNGSFLDKSC
DKHYQTSPKQSGLDFSLVQGAFRKLAKKDKVLTEVEAVVQHTLLPSLYEEPIGVESLRVY
LVLPELLRVLHKQHRRTDLTEAVAAAILRLHPDKLQVLGDCWSSLKPSVMTKHIGVWKKA
LSGILRSGHILRTRDPGIKHLLQVLGHLHRANQKSVETQTVPDSTFCMEEVHFNPIFLEE
DVKLWRLWSKQDVDQTPAIFCRYPFLMNLQSKINVFNINAALTQRTGMGPFDMFLMAAPA
PFFELRLNRASLIEDTFHQLRVACPSTFKRSLVVYFDEDAKLTDVYKRDFFLHLFDKLLV
PESGMFMYNDTETLAWFPAMPRVEEKRYFLFGVLCGMALYNNNMVHLPFPMAFFKKLVNI
KPSLEDLREFSPIEAGSLQYILDYPDDDVENMDMTFSVMWGDVAVELDPKETGKLVTSAN
KKEFVDTYVNYIFNQSVEVVFEEFRKGFFKVCDKDVVEFFQPEELRGVMVGKENFDWETL
KQNTVYEGEYHAGHPNIVTFWEVFEELTEDQKKAFLLFLTGCDRVPILGMNQIRMRVQPL
LNSSQQHFPEALTCHSLLQLPIYPSKEILQSRLIEAVGHNRGFWNE
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgatttcatggggagaggatagtcgtaatggctttggtttagtgaagccgaatggttta
gatacgaccaaaacggatattagttgcgttaatttgatacaccttaaatctaaaattcag
ggtctgtccgcaggtaacagtgtggtcgcgtttatcagaaataatgggagactagtgtct
gtcgcacggattcaagaggaccaagatgggagaagaattacagggaaactgaagagtgtg
acatgtaaggagacgattcgggctctgagttgtggagattctcatgctgttttactgtct
gaagagggccgggttctttgcttggacaaagccaatattctcagaccattggataaccta
tgtaaccgacaggtaactcaggttgcatgtggagaccagcattcaatttcactaacacag
gatggtcaggtgttcacatggggtcagaacaccagcggtcagctgggtttggggtggggc
gagcccagcgccatgtcccccaagcccctgaagtctctatcagggatccccctggttcag
atcactgcagggggagaccacagcttcgctctgtccctttctggagctgtgttcggctgg
ggcaagaacaccaccgggcagctgggactaggggacacaacaaacagacatgccccagct
cctgttgattgcctgaatctgaagaagactgttttgatttcatgtggaggagaacatact
gccgttctgacaaagggaggtgtggtgttcacatttggctcaggccgctatggacagctt
ggacacaactctctccgagatgaactacaacctcgagtggtggggcaactctgggggtca
aaggtgacccagatagcctgtggaagacaccacacattagcatttgtggggccctcaaat
aagatctactcatttgggcacggagagcaagggcagctgggaaatggagtaaagattgat
cagtctgtgccccttccagtacaactgccagaccagattgatgaccagaaaattgaacac
atttttgctggaggaaaccattcctttgcattgtgcactcttggtcaggagtctgaagaa
aggtctaacaatctcaggtcaagtgtgggcaaagtgacacaacaagctatagatgaaaaa
atcattgacaaatggatctcggaatgtgattcaaagtcttggaaaaaaggacagaaggaa
atcacaaaaatgttttcttctgcatcatgtttaaatgggagctttcttgataaaagttgt
gacaaacattaccaaacctcaccaaaacagtctggcctggatttttcactcgtccaaggc
gcattccggaagctggcgaaaaaggacaaagttttgactgaggttgaagctgttgtccag
cacacactgcttccctctctgtatgaggagcccattggagtggagagcttgagggtctac
ctggttctccctgagctcctcagggtccttcacaaacagcacagaaggacagatctcacc
gaagccgttgctgctgctatcctcagactgcaccccgacaagctgcaggtcctcggtgac
tgctggtcctcattgaagccatctgtcatgaccaagcacattggggtgtggaagaaggcc
ctgtcggggattctgaggagtggacatattctacgcactcgtgaccctgggatcaaacac
ctgctccaggtcctcggccatctccacagagcaaaccagaaatctgtagagacccagaca
gttccagacagtaccttttgtatggaggaggttcacttcaatcccatatttctagaggag
gatgtaaagctttggcgtttatggtcaaagcaggatgtggatcagacacctgccatcttt
tgtcgttacccattcttgatgaatctgcagagcaagataaacgtttttaacatcaacgcc
gcactcacacagaggactggcatggggccttttgacatgttcctcatggcggcgcctgct
ccgttctttgagctgaggctgaatagagcatcactcatcgaagacactttccatcaactg
agagtggcatgtcccagtaccttcaagaggtcccttgtggtgtatttcgacgaggatgcg
aagctgacagatgtctacaaaagggacttcttcctccatttgtttgataagctgttggtc
cccgagtctgggatgttcatgtacaacgacaccgagacgctggcctggttccctgcaatg
cctagagtggaggagaagcgttatttcctgtttggggttctgtgtgggatggccctgtat
aacaacaacatggtgcacctccccttccccatggccttcttcaagaagctggtgaacatc
aagccctctttagaggacctgagagagtttagccccattgaagcagggagtttgcagtac
atattggattaccctgatgatgatgttgaaaacatggacatgactttctcagtgatgtgg
ggtgatgtagcggtggaacttgatcccaaagaaactggaaaacttgtcacaagtgctaat
aagaaggagtttgttgacacctatgtgaactacatcttcaaccagtcagtagaggtggtg
tttgaagaattcaggaaaggcttcttcaaggtgtgtgacaaggacgtggtggagttcttc
cagccagaggaactgaggggagtgatggtggggaaggagaatttcgactgggagacgctg
aaacagaacactgtgtatgaaggagagtaccatgctgggcatcccaacatcgtcacattc
tgggaggtgtttgaggaactgacagaggatcaaaagaaagcattcctgttgttcctgact
ggctgtgatcgtgtgcccatcctgggtatgaaccagatcaggatgcgggtccaacccctt
ctcaactcctcccaacagcatttcccagaggcgctgacctgtcactctctgttgcagctg
cccatctacccctccaaagagatactacagagcaggcttatagaggctgttggccacaac
agaggcttctggaatgaataa
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