Salvelinus namaycush (lake trout): 120052215
Help
Entry
120052215 CDS
T07522
Name
(RefSeq) syntaxin-3-like
KO
K08486
syntaxin 1B/2/3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120052215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120052215
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120052215
Membrane trafficking [BR:
snh04131
]
SNARE
Syntaxin (Qa)
Stx-PM
120052215
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
120052215
Exosomal proteins of other body fluids (saliva and urine)
120052215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
Relaxase_C
AAA_13
FUSC
YtxH
STX6_10_61_N
FlaC_arch
Med11
DUF1664
CorA
Fib_alpha
EzrA
Motif
Other DBs
NCBI-GeneID:
120052215
NCBI-ProteinID:
XP_038854967
UniProt:
A0A8U0R485
LinkDB
All DBs
Position
Sna8:57299825..57303591
Genome browser
AA seq
285 aa
AA seq
DB search
MKDRLEQLKAKSDVAGDDVEIPVENQAFMDDFFAQIEEIRSSIDKIDESVAQAKKLYSTI
LSAPTSEQKTQDDLEAVTNDIKKAAGTARNKLKSIEKQLETNTEERSSADTRIRKSQHAI
LAKKFVEVMTKYNEAQTDFRDKSKGRIARQLEITGKTTTDEELEEMLEGGNAAVFTAGIM
ESGISKQALNEIEARHKDIVRLESSIKELHDMFVDIAMLVENQGGMIDKIESNMDQSVGF
VERAVADTKKAAKFQQEARRKQMMIMCCCVILCVIGGSFLYSFIK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgattggaacagttgaaggcgaaaagtgatgtggctggggacgatgtggag
attccagtggagaaccaagcctttatggatgacttcttcgcccagattgaggagattcgc
agcagcatcgataagatagatgagagtgtggcgcaagcaaagaagctgtactctaccatc
ctctccgcccctacatcagagcagaagacgcaagatgatttggaggcagtcaccaacgac
atcaagaaagcagccggcactgctcgcaacaaactaaagagtatcgagaagcaacttgag
acaaacacagaggaacggtcgtcagcagacacgaggattcggaagtcccagcatgccatc
ctggccaagaagtttgtggaggtgatgaccaagtacaacgaggctcagacggattttaga
gacaagagcaaaggccgcatcgcccggcagctggagatcacgggaaaaacaacgaccgat
gaggagctggaggagatgttggaaggagggaacgcagccgtcttcaccgcagggatcatg
gagtcgggtatatcgaagcaggcgttgaatgagatcgaggcgcggcataaagatattgtg
aggctggagagcagcatcaaagagcttcatgacatgttcgtggacattgctatgctggtg
gagaaccagggcggtatgattgacaagattgagagcaacatggaccaatcggtgggcttc
gtagagcgggctgttgccgacaccaagaaagcagccaaatttcagcaggaggcccgtagg
aagcagatgatgatcatgtgctgctgtgtcattctctgtgtcatcggagggtccttcctc
tacagctttatcaaatag
DBGET
integrated database retrieval system