Salvelinus namaycush (lake trout): 120052303
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Entry
120052303 CDS
T07522
Name
(RefSeq) sorting and assembly machinery component 50 homolog A isoform X1
KO
K07277
outer membrane protein insertion porin family
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120052303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
snh03029
]
120052303
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snh02000
]
120052303
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
120052303
Transporters [BR:
snh02000
]
Other transporters
Pores ion channels [TC:
1
]
120052303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
Motif
Other DBs
NCBI-GeneID:
120052303
NCBI-ProteinID:
XP_038855062
UniProt:
A0A8U0R4P0
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All DBs
Position
Sna8:2957919..2971929
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AA seq
469 aa
AA seq
DB search
MGAVHARSLDPLPMQGPELGVHADDVETPDMEQESKQEVLENKDVIVQHVHIDGLGRTKE
DCLTYEIAGVFRAKNLIDVMKRAHEARQKLLRLGIFRQVEVVIDTSQGVDALPNGLDVTF
AVTELRRMTGSYNTMVGNNEGSMVLGLKLPNVFGRAEKLTFQFSYGTKETSYGLSFFKPQ
PGHFERNFAVNFYKVTGQFPWSSLRETDRGVSTEFSFPLWKTNHTLKWEGVWRELGCLAR
TASFAVREESGHSLKSSLSHAMVIDTRNSTILPRRGALLKINQELAGYTGGDASFLKEDF
ELQFNKRLFWDSVLSASLWGGCLLPIGDKPTCIADRFYLGGPTSVRGFSMYSIGPQSEGD
YLGGEVYWAGAIHLYTPLPFRPGKGGFGDLFRTHFFLNAGNLCNLNYGDGPRAHLSKLAE
CIRWSYGAGIVLRLGNIARLELNYCIPMGVQSGDRICDGVQFGAGIRFL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccgtccacgcgaggagtcttgaccctctgccaatgcagggacctgagttgggg
gttcatgcggatgacgtcgagacaccagatatggagcaggaatcaaaacaagaggttctt
gaaaacaaagatgtcatagtccagcatgttcacatagatggtctgggaagaaccaaggag
gattgcttaacatacgagattgctggtgtcttcagagcaaagaacttgattgacgtaatg
aagagagcccacgaagccagacagaagctcctccgtcttggtatcttcagacaggtggag
gttgttattgatacctcacaaggggtggatgctctgcctaacggactagatgtgacgttt
gcagtgactgagctgagacgtatgactggtagctataacaccatggttggaaataacgaa
ggcagcatggttcttggtctgaagctgcccaatgttttcggtcgtgcggaaaagcttaca
ttccagttctcctacggcaccaaagagacttcctatgggctgtctttcttcaagcctcaa
cctggtcactttgagcgcaattttgccgttaacttttacaaagtcacaggccagtttcca
tggagctcgctgagagagactgatcgcggcgtctccacagaattcagtttccctctttgg
aagacgaaccacaccctgaagtgggagggtgtgtggcgagagctgggatgtctggcgcgt
accgcctcattcgcagtccgggaggagagcggccactccctcaagtcatcactctcgcat
gccatggtcatcgacaccagaaactccacaatccttcccaggaggggagccttgctcaaa
atcaaccaggagttggctggctacactggaggagatgccagttttctgaaagaggacttt
gagctccaatttaacaaacgtctcttctgggactcggtcctgtctgcatctctctggggt
ggatgcctcctgcccattggagataagccaacttgcattgctgacaggttctatctcggt
ggtcctactagcgtcagaggattcagtatgtacagcatcggcccacagagtgaaggtgac
tacctgggaggtgaggtgtattgggctggagccatccacctgtatactccactgcccttc
cgtccaggcaaagggggattcggagacctcttcaggacccacttcttcctcaatgctggg
aacctgtgtaacctcaactatggtgacgggcctcgagcacacctgagtaagctggcggag
tgtatccgctggtcctatggagcgggaatcgtgctgcgacttggaaacatcgcccggctg
gagctcaactactgcattcccatgggcgtccagagtggagacaggatatgcgacggggtc
cagtttggagctggaatccgatttctgtga
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