Salvelinus namaycush (lake trout): 120052329
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Entry
120052329 CDS
T07522
Symbol
ap4e1
Name
(RefSeq) AP-4 complex subunit epsilon-1 isoform X1
KO
K12400
AP-4 complex subunit epsilon-1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120052329 (ap4e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120052329 (ap4e1)
Membrane trafficking [BR:
snh04131
]
Endosome - Golgi transport
Others
AP-4 complex
120052329 (ap4e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP4E_app_platf
Cnd1
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
120052329
NCBI-ProteinID:
XP_038855103
UniProt:
A0A8U0R3G7
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All DBs
Position
Sna8:complement(5406158..5423608)
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AA seq
1173 aa
AA seq
DB search
MSDVVEKTLSALPSLLSLDSQAGAGKLSPSSKLGNLIKGITELTSKHEEEKLIKKELASI
KEQVASPNTTMRQMKEIMVRAIYCEMLGYQASFSYIHAIKLAQQGSVLEKRVGYLAVSLF
LNETDEFLLLLVNTVLKDLQSTNLIEVCMALTVVSQMFPKDMIPAILPVVEEKLTHPKEI
IRRKAVLALYKFYLIAPNQVQHIHSKFRKALCDKDPGVMTASLHIYLQLIKESPESYKDL
TGSMVTILRQVVGGKLPLDFNYHSVPAPWLQIQLLRILAYLGKEDQGTSEVMYDVLEESL
RRAEMNHNITYAILFECVKTIYTVHPKSQLLEKAAECIGNFVLSPKINLKYLGLKALTYV
VQQDANLALPHQMTIIECLDHSDVIIKRETLELLFRITNAQNVTVIVEKMLEFLRLTCDD
YSTIDLVGKVAELAEKYAPDHVWFIQTMNSVFSLGGDVMQPDIPNNFLRLLAEGVDNVED
KQLRIFAVDSYVSLLQGETAKLPQRFLQVISWVLGEYSYLREEDLDPGSVMRLLARLLDQ
RHTSTETRSWVLGAMTKLCSSPVSVALARDVCERYSGSLNTVLRQRAQELMILSQDTKLR
ARVLPAEGKLETLEVDSSLSFLDGYVSEALAAGAAPYKSPHQRQEDLVQEKALSLEPYGL
SLPVSLSSCSITDRLTDRRSPTLLSMSSGLSGISTELSHQEGRPRLVSQCYFSSTTLKLD
GVKRVWGKDGYLAQQQSAGETPTSLVELPSPLLSPQSPPSQTQKPSSGPEPDQEKRQLAS
SLFVGLGSHNSVCLMGRAEPAPRHFRRKPRGESSGASEGSSDSSHSSRSAAIDNLLLSNL
LDSTTVASEGGAATTTAPQQISQRTLDHTTSNGSPHVEETEQRVEAGGPLSLIRGNSMVA
VVPPTYTQTDPQTQQDLHPAPALDITRDLPLTSHLPAELSGLARSEFTPLCSEQDSSLAL
SACRVYKEDALVLLVFISNNTDSALHQMALQLTCKELEISCISGSPLKEVKGHSVSVCLH
TVVMKRASVQVELAGLLSYQRPLGQPQAAQFSLSLSLKHFLRPLTVSTGDYGKMWLSFSH
DLKQNLRLVTTEHQEPLTATLDALKGKLHLHVVDIIGSEGIVACRLLQGQGQGQPCLLHC
RVHADSLAVWLRSPVPELPDSLLYHCQKALTET
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgttgtcgagaagactctgtctgctctcccgagcctcctttcgctagactcg
caggcaggagctgggaaactttccccctcctccaaattagggaatctgatcaaaggaatc
actgaactgacatccaaacatgaggaggaaaagcttattaaaaaggaactggcgtctatc
aaggagcaggtagcatctcccaacaccaccatgcgtcagatgaaggaaataatggtgaga
gccatctactgtgagatgctgggttaccaggcgtccttcagttacattcacgccatcaag
ctggcccagcagggcagtgtcctggagaagagagtgggttaccttgctgtatccttgttc
cttaatgaaactgatgagtttctgctactcctggtgaacacagtcttaaaggatctgcag
agtaccaacctgatcgaggtgtgcatggctctaactgtcgtcagtcagatgtttcccaaa
gatatgatacctgccatcctaccggtggtggaggagaaactcacacatccaaaggagatc
atccggaggaaagcagtcctggctctgtacaagttctacctgatcgcaccgaaccaggtg
cagcacatccacagcaagtttaggaaggccctgtgtgacaaagaccctggagtcatgaca
gcctctctacacatctacctacagctcatcaaggagagcccagagagttataaggatctg
accgggagcatggtaaccatcctgaggcaggtggtaggaggtaaactccccctggacttc
aactaccacagtgttcctgctccctggcttcagatacagctgctcagaatactggcctac
ctggggaaggaagaccagggcactagtgaggtgatgtatgatgtactggaggagtcgtta
agaagagcagagatgaatcacaacattacttacgccattttatttgagtgtgtgaagacc
atctatacagttcatcctaaatcacaactgttggagaaagcagcggaatgcatcgggaac
tttgtcctatcgcctaagatcaacctcaaatatctgggtctgaaggctctgacgtacgtg
gtgcagcaggatgctaacctggccctgcctcaccagatgaccatcatagagtgtctggac
cactctgacgtcatcattaagcgagagacactggagttactcttccgcatcaccaatgcc
cagaacgttacagtgatcgtcgagaagatgcttgagtttctcaggctgacctgtgacgac
tacagcactatagacctcgtggggaaagtagcagaactagctgaaaagtatgccccagac
catgtctggttcatccagactatgaactctgtgttctctctggggggagacgtgatgcag
cctgacatccctaacaacttccttagactactggctgaaggtgttgataatgtggaggac
aagcagctgaggatatttgctgtggactcctatgtgtccttgctacagggggagacggcc
aagctgccccaacgcttcctacaggtcatcagctgggtgctgggtgagtattcctacctg
agagaggaggacttagacccaggcagcgtgatgagactgctggccagactactggaccag
agacacacctccactgagaccaggagctgggtactgggggccatgaccaagctgtgctct
agcccagtgtctgtggccctggccagggatgtgtgtgagaggtactctgggtctctgaat
acggtgctccggcagagggcccaggaactgatgatccttagccaggatacaaagctccga
gcccgggtactgccagccgagggcaagctagaaaccctggaggtagactcgtccctgtcc
ttcctggatggctatgtgtctgaggcgttggctgctggggcagctccgtacaaatctcct
catcagaggcaggaggacctggtccaggagaaagctctgagcctggagccctatggtctg
tccctgccggtcagtctgtcgtcctgcagcatcacagacagactgacagacagacggtct
cctactctgctctctatgagctcaggcctgtctggaattagcactgagctatctcaccaa
gaaggaagacccaggttagtatcccaatgttatttcagctctaccactctgaagttggac
ggggtgaagagggtgtgggggaaggacgggtacctggcccagcagcagagtgcaggagag
accccaacctccctagtggagctgcccagtcccctgctgtcccctcagagcccaccctcc
cagacacagaaaccctcctctggacctgagcctgaccaggagaaacggcagctggcctcg
tcgctctttgttggcctggggtcccacaactctgtgtgtctgatgggccgagccgagccg
gcgccccgacacttcagaaggaaacccagaggggagtcatcaggcgccagcgaaggctcc
tctgactcctcccactcgtctcgcagcgctgccattgacaaccttctgcttagcaaccta
ctggactcgaccactgtggcctcagaggggggtgctgctaccaccaccgcacctcaacag
atctcccagagaacgctggaccataccactagcaacggtagcccccatgtagaggagacg
gagcagagagtagaggcaggaggacctctctctctgatcaggggaaatagcatggtggct
gttgtaccgcctacatacacacagacagacccacaaacacaacaagatctacacccagct
ccagccctagatataaccagggacctccctctcacctcccacttgccagcagagctctct
gggctggcccgctctgagttcacccccctctgctcggagcaggactccagcctggctctg
tcagcctgtagagtgtataaagaggatgccttagtgttgctggtcttcatttccaacaac
actgactcagcgctccaccagatggcgctgcagctcacctgcaaggaactggagatctcc
tgtatctcaggtagtccgttaaaggaggttaagggtcacagtgtgtcggtttgtctgcac
actgttgtcatgaagagagcctcagtccaggtggagctggctgggttactgtcctaccag
agacccctgggccagccccaggcagcacagttctcactgagcctctccctgaaacacttc
ctcaggccgttgactgtgtccacaggggattatgggaaaatgtggttgtctttctctcat
gacttgaagcagaaccttcgactggtaacaacagaacaccaagaacctctgacggccaca
ctggacgcgctgaagggcaaactacacctccacgttgtcgacatcatagggtcggagggc
atcgtggcgtgccggctgctccagggtcaaggtcagggtcagccatgtctgcttcactgt
cgtgtccacgctgactctctggccgtgtggctgcgctcccctgtccctgagctgcctgac
tccctcctctaccactgtcagaaagccctgacggagacctga
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