Salvelinus namaycush (lake trout): 120052385
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Entry
120052385 CDS
T07522
Symbol
ticam1
Name
(RefSeq) TIR domain-containing adapter molecule 1
KO
K05842
toll-like receptor adapter molecule 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04217
Necroptosis
snh04620
Toll-like receptor signaling pathway
snh04621
NOD-like receptor signaling pathway
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120052385 (ticam1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120052385 (ticam1)
04621 NOD-like receptor signaling pathway
120052385 (ticam1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120052385 (ticam1)
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Gene cluster
GFIT
Motif
Pfam:
TRIF-NTD
TIR_2
Motif
Other DBs
NCBI-GeneID:
120052385
NCBI-ProteinID:
XP_038855186
UniProt:
A0A8U0R6Q0
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Position
Sna8:complement(11131137..11134876)
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AA seq
659 aa
AA seq
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MLEMDREAHAEDEPRGGTGLVDAFKILSKVPYERQLSLTFKLGDSLAEELVHAMSLICLG
KRSEALNKLQALEDNNIIANHLAEKVRMCGVKLEDLTVSIVPFQECIVGTLADLARIFKV
LAEERLCDSSLRDLAYQTALATYKNSGEESSELEYIQMQLREEANRVCGPQIEDTVGGMC
FPKDSSSGLCSIPPLDQGGTAFKKSGFPNQTGSGHSPPSSLRDDTSICSYPSHLEISVSE
TFGFKTSNIPSQPPPMNLKPVQSPVPHYGTNTGDEGAFKYFSRVTSRDIPPTQNVPKPVK
GEMDRVTSVAVSCEHRTGSEEVRVSPFSPVNFTPAQTKFDNPESPNAHSKPRPKNNLVPP
SNTNRPTSHPTTTEPVSASVPLKTPNQKMEEDEEEVFFSFVILHAAEDVDMAEKFKEELK
SIVGGEGATFSQDFAIPGRNTLMCVEDAINNSAFTILMLTRNFNTRLLEVETSSVLMNAI
ENLHKYNTVIPFLPQENRMPRENMPKVLRIFIPLEEGNAFERKAKRAMAPARIAKQRRLW
LSEQAVRAQVRRQERLRLEERLQMDLIRGQETERMQRYLLQQQLSNQPSTPAMPHFTAPF
LGSTPINVSNTSVTPPQHGWSHPPGNIHIQNARYIMFGNDSKMTVGQGGDSSGDEEDRF
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgttagagatggacagggaagctcatgcagaagatgagcccagaggagggactgggtta
gtggatgcctttaagatcctctctaaggtcccatacgagagacagctaagcctgactttc
aagttgggtgatagcctggccgaggagctggtacatgccatgtctctcatctgcctcggg
aagaggtcagaggcactgaacaagctccaggctttggaggacaacaacatcattgctaac
catctggctgaaaaggtgagaatgtgtggagtcaagttggaggacttaacagtgagcatt
gttcctttccaagagtgtattgtgggcaccttagcagacctagcgaggattttcaaggtg
ttggctgaggagaggttgtgcgactcctctctgagggatttggcttaccagacagctcta
gccacatacaagaacagtggtgaagagagttccgaattagaatacatacagatgcagctg
agagaagaagccaacagggtctgcgggcctcagattgaggacacagttggggggatgtgt
ttccctaaggactcctcatcaggcctttgctccatcccgccgctggaccaagggggcaca
gcttttaaaaaatcaggctttcccaatcagacaggaagtggacacagtccgccgtcctcc
ctacgggatgacacctccatttgttcctacccttctcacttggagatcagtgtatccgaa
acatttggctttaaaacaagcaacatcccatcgcagcctcctccaatgaatttgaagcct
gtacaatcacctgttccacattatggtacaaatacaggagatgaaggtgcatttaaatac
ttttccagggttacgtctcgggatataccacccacacaaaatgtgcctaagcctgttaaa
ggagaaatggacagagttactagtgttgcagtgtcttgtgaacacagaacggggtcagag
gaggtgagagtttcacccttttcgcctgtcaatttcactccagctcagactaagttcgat
aaccctgagagtccaaacgcacattccaaaccacgccccaaaaataaccttgtgcctccc
tcaaacaccaataggccaacttctcatccaactaccactgaaccagtgtcagcaagtgtt
ccgttgaaaaccccaaatcagaagatggaggaggatgaggaggaagtgtttttctccttt
gtcatcctgcatgcagcagaggatgtggatatggctgagaagtttaaagaggaactaaag
tctatagttggtggtgaaggagcaaccttctctcaggactttgccatcccaggcaggaac
accctcatgtgtgtggaggatgccatcaacaattcagccttcactatcctgatgcttact
cgcaacttcaacacccgtctgctggaggtagaaaccagttctgtgctcatgaatgccatt
gagaacctgcacaagtacaacactgtcatcccttttctaccacaggagaaccgtatgccc
cgagagaacatgcccaaagttctgaggatctttattccgttagaggaaggtaatgccttt
gagagaaaggcaaaaagggccatggctccagcaaggattgctaaacagaggaggttgtgg
ttgagcgagcaggcagtgagggcgcaggttaggagacaggagagactacgactagaggag
aggcttcaaatggatttaattcgtggtcaggagacggaaagaatgcagagatatttgttg
caacaacaactttccaatcaaccctcgactcccgcaatgcctcactttactgctccattt
ttaggaagtacacctataaatgtgtccaatacgtcagtgacaccaccgcaacatgggtgg
agtcacccaccaggaaacatccacatccagaatgctcgctatatcatgtttgggaatgac
tctaaaatgactgtcggacaaggaggggacagcagtggggatgaagaggacaggttctaa
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