Salvelinus namaycush (lake trout): 120052411
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Entry
120052411 CDS
T07522
Name
(RefSeq) peroxisome proliferator-activated receptor alpha-like
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03320
PPAR signaling pathway
snh04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
120052411
03320 PPAR signaling pathway
120052411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120052411
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
snh03310
]
120052411
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120052411
Nuclear receptors [BR:
snh03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
120052411
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Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120052411
NCBI-ProteinID:
XP_038855222
UniProt:
A0A8U0R4Q2
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Position
Sna8:13453701..13522723
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AA seq
475 aa
AA seq
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MILPLVPSSVMVDMESHCRPPSPLEDSVLCGDFIGGMEELQDISQCIDGDAHSSFDVPEY
QSQSSNGSGSEGSTILDALTPASSPSSGVYGAVAGQEEFSSTSLNLECRVCADRASGYHY
GVHACEGCKGFFRRTIRLKLEYDKCERRCKILKKNRNKCQYCRFQKCLSVGMSHNAIRFG
RMPQSEKLKLKAEIQTGDREVEDPEQADQKTLARHIYEAYLKNFNMNKAKARTILTGKTS
TPPFVIHDMDTLQLAEQTLVAKMVGPAGGHLLEKEAEVRIFHCCQCTSVETVTELTEFAK
SVPGFSSLDLNDQVTLLKYGVYEALFALLASCMNKDGLLVAYGSGFITREFLKSLRRPFS
DMMEPKFQFAMKFNGLELDDSDLALFVAAIICCGDRPGLVNVGHIERMQENIVQVLRLHL
LANHPDDTFLFPKLLQKLSDLRQLVTEHAQLVQEIKKTEDMSLHPLLQEIYRDMY
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgatcctccccctggtcccgtcctccgtcatggtcgacatggagagccactgccggccg
ccgtcccccctagaggattcggtgctgtgtggggacttcattgggggcatggaggagctg
caggacatctcccaatgcattgacggtgacgcccacagctcctttgacgtccctgagtac
cagtcccagtcgagtaacggctctggctctgaaggatccaccattctagatgctctgacc
ccagcctccagcccatcgtcgggagtgtatggggcggttgcagggcaggaagagttctcc
tccacctcgctcaacctggagtgtcgggtgtgtgccgaccgcgcctccggataccattat
ggagttcacgcctgtgagggctgcaagggtttctttcggcggaccatccgcctcaagctg
gaatatgataagtgtgaacgccgatgtaagatcctgaagaagaaccggaacaagtgccaa
tactgccgcttccagaagtgcctgtctgtgggcatgtcccacaatgcgatccgttttggt
cggatgccccagtcagagaagctgaagctgaaggcagagatccagacgggggacagggag
gtggaggaccccgagcaggccgaccagaagaccctggccaggcacatctatgaggcctac
ctcaaaaacttcaacatgaacaaggccaaagcccgcaccatcctcaccggaaagaccagc
actccaccatttgtcatccacgacatggatacccttcagctggcagagcagaccctcgtt
gccaagatggtgggcccggctgggggccatctgctggagaaggaggctgaggtacgcatc
ttccactgctgccagtgcacctccgtggagacggtcacagagctgactgagttcgccaag
tctgtccccggcttctccagcctggacctgaacgaccaggtgactctgctgaagtatgga
gtgtacgaggcgctgttcgccctgctggcctcatgtatgaacaaggacggcctcctggtg
gcctacggatcgggctttatcaccagggagtttctcaagagtctgaggaggcccttcagc
gacatgatggaacccaagttccagttcgccatgaagttcaacgggctggagctggatgac
agtgacctggccctgtttgtggccgccatcatctgctgcggagaccgtcccggcctggtg
aacgttggccacattgagcgcatgcaggagaacattgttcaggtgctgcggctccacctg
ctggccaaccacccagacgacaccttcctcttccccaagctgctgcagaaactgtccgac
ctccggcagctggtcaccgagcacgctcagttggtccaggagatcaagaaaacagaggac
atgtcgctccaccccctgctgcaagagatctacagagacatgtactga
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