Salvelinus namaycush (lake trout): 120052444
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Entry
120052444 CDS
T07522
Symbol
chrna5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120052444 (chrna5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120052444 (chrna5)
Ion channels [BR:
snh04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
120052444 (chrna5)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
V-set
Ig_2
Ig_3
ig
I-set
Motif
Other DBs
NCBI-GeneID:
120052444
NCBI-ProteinID:
XP_038855285
UniProt:
A0A8U0R564
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All DBs
Position
1:60931133..60995856
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AA seq
481 aa
AA seq
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MKVLEKGEGDTIFTMKDVTRNDSGTYSCVYTRDKLIPSQVFSTGKDLVAIQVYEGIPKLS
SYAKTEDKLFKNLFRNYQKWVRPVEYLNGTVRVRFGLAISQLVDVDEKNQLMTTNVWMKQ
EWLDMKLRWNPDDYLGITNIRVPSDSIWIPDIVLYDNADGRFEGSVTKAVVKYDGTITWT
QPANYKSACIIDVTFFPFDLQNCSMKFGSWTYDGSQVDILLEDFHVDKRDYFDNGEWEIV
KATGSRGLRMDGSCHFPFITYSFIIRRLPLFYTLFLIIPCIGLSFLTILVFYLPSNGGEK
ISLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFTMIFVTLSIVITVFAINIHHRS
SSTHQGMAPWVRRIFLHRLPKLLCMRSHVDRYATPESTPHLSSRNNLQAALDSIRYITMH
VVKENEVREVVQDWKFVAQVLDRVFLWTFLLVSVLGSALLFIPVIYKWANIIVPNHAGGS
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttctggagaaaggggaaggtgacaccattttcaccatgaaggatgttacaaga
aatgactcaggcacctacagctgtgtgtacaccagagataaactcatacctagtcaggtg
ttctcaacaggcaaggatttagtagccatccaggtctacgaaggaatccctaaactgtcc
tcctatgccaagacagaggacaaactgttcaagaacctcttcagaaactaccagaaatgg
gtgaggcctgtggaatacctcaatggcacagtacgggtcagatttggactggccatctcc
cagctagtggacgtggacgagaagaaccagttgatgacaaccaatgtgtggatgaaacag
gaatggttggacatgaagctacgctggaaccctgatgactacctgggcatcactaatatc
agagtcccctcggactccatctggatcccagacattgtgctctatgacaatgccgatgga
cgttttgagggctctgtcaccaaggctgttgtcaagtatgatggcaccatcacctggaca
cagcccgctaactacaagtcagcctgcatcatcgatgtcaccttcttcccctttgacctg
cagaactgctcaatgaagtttggctcctggacctatgatggctcacaggttgatatcctc
ctggaggacttccatgtggataagagggactactttgacaatggtgaatgggagatagtg
aaagcgacaggcagccgtggtctgaggatggacggttcctgccacttccccttcattacc
tactcctttatcatccgtagactgccgctcttctacaccctcttcctcattatcccctgt
atcggcctttccttcctcaccatcctggtcttctacctgccctccaacggtggggagaag
atctccctgtgcacctctgtgctggtgtccctcaccgtcttccttctcgtgatcgaggag
atcattccgtcctcctccaaggtcatccctctgatcggggagtacctggtgttcaccatg
atctttgtcacgctctcaatcgtcatcaccgtcttcgccatcaacatccaccaccgctcc
tcgtccacgcaccaaggcatggcgccctgggtgcgtcgtatcttcctgcacaggctgcct
aagctgctgtgtatgcgcagccacgtggaccgctatgctaccccagagtccacccctcat
ctctcctctaggaataacctgcaggctgctttggactctatccgctacatcaccatgcat
gtggtcaaggagaacgaggtcagagaggtggtgcaggactggaagtttgtggctcaagtt
ctggatcgtgtgttcctgtggacctttctcctagtctcagtactgggctctgctctgctc
ttcatccctgtcatctacaaatgggcaaacatcatcgtccccaaccatgcaggcggcagc
ggataa
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