Salvelinus namaycush (lake trout): 120052473
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Entry
120052473 CDS
T07522
Name
(RefSeq) neurogenic locus notch homolog protein 2-like
KO
K20994
Notch 2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120052473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_3
Ank_5
Ank_4
EGF_3
EGF_Teneurin
JAG1-like_EGF2
EGF_DL_JAG
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
120052473
NCBI-ProteinID:
XP_038855333
UniProt:
A0A8U0UJX1
LinkDB
All DBs
Position
Sna8:18400261..18458501
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AA seq
2496 aa
AA seq
DB search
MGQLPVFSSGKVLVIVVCCVRLSLALQCLDAVKPCVNNATCATFTNGTGYCRCAAGFLGD
YCHHKDPCHPGYCLNGGNCSVAVSGIPGSPTCSCPLGYTGQHCQTPQNSTCFPKNPCANQ
GVCTLLSLDKYKCQCAHGWTGMRCNREDSCLSGPCANGGTCSSLSGGKFSCTCPPGYWGP
RCLNDTDECAASAPVCQNQGGCVNTPGSYRCNCAPGFTGRQCETPYIPCSPSPCLNGGTC
RPTSETSYWCHCLPGFNGTNCENNIDDCPGHQCRNGGTCMDGVNTYNCQCPPEWTGQFCT
EDVDECRLQPNTCQNGGTCSNIQGSYTCVCVNGWSGLDCSKNIDDCATAACTNGSTCIDR
VASFLCVCPYGKTGLLCHVNDACISSPCRDGAQCDTNPINGMFNCNCAPGYIGSTCNDDI
NECIIGFPSGPNPCEHGGSCVNTDGSFTCNCARGYGGPRCETDINECASSPCQNDGTCLD
RIGDYSCICMEGFEGTHCEIDINECASSPCLNQGICLDQVKRYVCQCPLGFSGEMCQIDI
DECSSTPCLNGAKCIDRPNGYECECAEGFSGPLCKENIDDCDPEPCHHGVCRDGIATFSC
DCDPGYTGSICNVQVMECHSNPCQNRGRCIDLVNKYQCNCLPGTSGVNCEFNVDDCASNP
CEYGECQDGINEYKCVCAPGYAGVKCDVDIHECNSSPCMSGGTCVDKVNGFICQCPPGTH
GPLCHSGTNHCAPQPCVHGDCVEQQSGYNCECDSGWVGQHCDQEKDECQSSPCQHRGTCV
DRLNGYSCQCRPGFTGVNCEFNMEECASSPCENHGTCVDGVNTYSCLCDPPYSGKHCEDE
LVPCASHPCERGGVCQPTPDYTFYTCRCSSGWQGPRCTEDVDECMKNPCQNRARCINSQG
SYVCKCRPGYSGLNCQTNIDDCSPNPCLNGGSCVDEVGGFSCDCRQGFDGERCEAEVDEC
ASQPCQNGAVCRDYVNSFVCVCRPGFDGILCEHNIPECTESSCLNNGTCVDDINTFSCRC
RPGFYGTFCEYEQNECDSQPCQNGGTCTDGLGSYRCTCPVGYNGQNCQNFVNLCSQPLCQ
NGGSCSQSETTWLCHCPVGWTGMYCDVPNMSCQDYAARNGIQVELVCKHSGRCVNVGNAH
QCQCLPGYTGSYCNEMVDECLSNPCRNGATCMDYQGTYECMCKAGYQGVNCEYDVDECHS
NPCHHGGTCINLINRFSCACPPGTNGVQCEVNVDDCAPKPGSWELRCLNGGQCVDGVGRY
TCSCPPGFAGEHCEGDVNECLSGPCHSPGSLDCVQLANDYQCRCRLGYTGRHCESMVDLC
QSKPCHNSGTCSMNMSSVHGYTCICQPGFTGFNCGEVEGYNCAKLRCQNGGHCQEFQVGR
PHCRCQPGFSGPRCETVHSCQNRPCLNGGTCMTNQLYQYSCHCPAHFSGRHCENVIFDPS
PSTPASCPYVECEQHSGDKVCDPQCNSHECQWDGGDCSLYWRQPWVNCTAPVPCWELFRN
GRCDPECDNSGCLFDSFECQESAQSYCKYDKYCAAHYANKICDKGCNTEACGWDGLDCSG
DTPAVVADGTLVIVVLLQPEELMRDMRGFLRSLGTLLHTNLRVKMDDQQKPMLYPYYGLE
HDDANEVQPSTMKLRGKRELDKEVIGSKVYLEIDNRKCSERSMDCFSSTELAASFIAAEY
LKSELPYPVVSVNSDPTEPHKPPFLLYLAVGAAVIILLILVLGVLAAKRKRKHGDLWLPD
GFLAKKDDKRREPVGQDDFGMKNFKTQDGGMMDGGQRWMEEEAPPKKVRTEDKPLLPMGV
DGGVDRREWTLQHHKAADISLTPPQTDLEADCLDVNVKGPDGFTPLMLASLRNGGASDCG
LQAEEEEESGGDEPGPNAISDLITQGATLMAQTDRTGETALHLAARYARADAAKRLLDAG
ADANAHDNMGRTPLHAAVAADAQGVFQILIRNRATELDARMNDGTTPLILAARLAVEGMV
EELVHCHADINAVDDHGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEQTPLFLAARE
GSFEAAQVLLDHYSNRDITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHNGPNHMGG
GHSSLVCGGNGAGYMGMRPGPQGKKSRRGGAKVGGVGGATAKELKDMKAKRRKKPTGGEG
PAVGGASGNGTKAAGGLSESSVTMSPVDSLESPHSYIGDAAGASKTTNSPLLGSPSSRPL
LPPVSHMLSQQQSWVGLKHGYGGHMFSLLPQQMGSGHPSMSQHHGQGLLTPMNVTMSREQ
LPPIVTFQMMAPGGGQALLKQPQPGQVQSQGQNQGQPQGQPQSQQGPTHLHCTQGMLYQM
PNMSLQHSLSHSLPHPHSHGLAHGHGMVQDGQSRQQLPPYQAMQSPVDKYPTPPSQHSYA
TAGSESTTPGYPAHPPSEHPYLTPSPESPDPWSSSSPHSNSDWSDVTTSPTPLGNPHALL
PLRHTHIPEQVQLQPQSQQTQQNPQQPQRGNMQVFA
NT seq
7491 nt
NT seq
+upstream
nt +downstream
nt
atgggccaattacccgttttctcttcgggcaaagtcttagtcatcgtcgtctgctgcgtt
cgactttctttggctctccagtgtctggatgctgttaagccgtgtgtcaacaatgctacg
tgtgccaccttcaccaacgggacaggatactgcaggtgtgccgcaggtttcctgggtgat
tactgccatcacaaagacccatgtcaccctggttactgtctgaatggggggaattgctct
gtggctgtgtcgggcatcccgggcagccctacctgctcctgtcccctgggctacaccggg
cagcactgccagaccccccagaactccacctgcttccccaaaaacccatgtgccaaccaa
ggagtctgcaccctgctctccctcgacaagtacaagtgccagtgtgcccacggatggaca
ggcatgcgctgtaatcgtgaggacagctgtctgtcgggaccctgtgctaatggaggcacc
tgcagctctctgtctgggggcaagttcagctgtacctgtcctccaggttactggggtcct
cgctgcctcaacgacactgacgagtgtgctgcctctgccccggtatgtcagaaccaaggg
gggtgtgtcaacacccccggctcctacaggtgtaactgcgcccccgggttcactggccgc
caatgtgagaccccttacatcccctgctccccctcaccctgcctcaacgggggcacgtgt
cgcccaacctctgagaccagctactggtgccactgcttgccaggcttcaatggtactaac
tgtgagaacaacattgacgactgccccggccatcaatgccgaaatggtgggacctgcatg
gacggtgtcaatacttacaactgccaatgccccccagaatggactggtcagttctgtact
gaggatgtggatgagtgtcgcctgcagcccaacacatgtcagaacggggggacctgcagc
aacatccagggcagctacacctgtgtatgtgtcaacggctggagtggcctggactgctct
aaaaacatagatgactgtgctacggctgcctgcaccaatggctccacctgtattgaccgt
gtggcatccttcctttgtgtctgcccctatggaaaaacaggtttgctctgccacgtgaac
gatgcctgcattagtagcccgtgccgggacggggcgcagtgcgacaccaaccccatcaac
ggcatgttcaactgcaactgtgccccaggctacataggaagcacctgcaatgacgacatc
aacgagtgcatcataggcttcccctcaggtccaaacccctgtgagcatggaggatcgtgt
gtgaacacagatggctcgttcacatgtaactgtgcgagaggttatggtgggccgcgctgt
gagacagacatcaatgagtgtgcgtccagcccctgccagaacgacggcacctgtctggac
cgcataggagactacagctgcatctgtatggaaggatttgagggaacacactgtgagatt
gacatcaacgagtgtgccagctctccatgtctgaaccaagggatctgtctggatcaagtc
aaacgctacgtctgccagtgccctctaggattcagtggggagatgtgtcagatcgacatt
gacgagtgttccagcacaccatgtctcaacggggccaagtgtatcgaccgtcccaacggc
tacgagtgtgaatgtgctgaaggcttctcggggccgttgtgtaaggagaacatagatgac
tgtgacccagagccctgtcaccatggggtttgtcgtgacggcatcgccaccttctcctgt
gactgtgacccgggctacaccggctctatctgcaacgtccaggtcatggagtgccacagc
aacccctgccagaaccgtggacgctgcatcgacctggtcaacaagtaccagtgcaactgt
ctgcctggcacctcgggggtgaactgtgagttcaatgttgacgactgtgccagtaacccc
tgtgaatatggagagtgccaggacgggatcaacgagtacaagtgtgtctgtgctccagga
tacgcaggtgtaaaatgtgacgtggatatccatgagtgtaattccagcccgtgtatgagt
gggggtacgtgtgtggacaaggtaaacggcttcatctgccagtgtccccctggcacccac
ggccccttgtgccactctggcaccaaccactgtgccccccagccctgtgtacacggagac
tgtgtagagcagcagagcgggtacaactgtgagtgtgattctggctgggtggggcagcac
tgtgaccaggagaaggatgagtgccagtccagcccctgccagcacagaggcacctgtgtg
gacagactcaacggatactcttgccagtgtcgccccggattcacaggtgtgaactgcgag
ttcaacatggaggagtgtgcatcaagcccgtgtgagaaccatggtacctgtgtggacgga
gtcaacacctacagctgcctgtgtgatcctccatactccggaaaacactgtgaggacgag
ttggttccctgtgcatctcatccatgtgagaggggaggtgtgtgtcagccaaccccagac
tacaccttttacacctgtcgatgttccagcggctggcaaggcccccgctgcactgaggat
gtggatgagtgcatgaagaacccatgtcagaacagggcccgttgcatcaacagccagggc
agctacgtgtgcaagtgtcgaccaggctacagcggtctcaactgccagaccaacatcgat
gactgctcccccaacccgtgtctgaacggtggttcctgtgtggacgaagtgggagggttc
tcctgtgactgccggcaagggtttgatggtgagcgttgtgaggcagaagtggacgagtgt
gccagtcagccgtgccagaatggagctgtgtgccgggactacgtcaacagctttgtctgt
gtgtgccggccaggtttcgatggaatcctctgtgaacacaacatcccagaatgcactgag
agttcctgtctgaataacgggacctgtgttgatgacatcaacaccttctcgtgtcgttgt
cgtcctggtttctacggcaccttctgtgagtatgagcagaatgagtgtgactctcagccc
tgccagaacggaggaacctgcactgacggcctgggctcctaccgctgcacctgccctgtg
ggctacaatggacagaactgccagaactttgtgaacctgtgtagccagccactgtgccaa
aatggagggtcttgttcccagtcagagaccacctggttgtgtcactgtcctgtgggctgg
actggcatgtactgtgatgtccccaacatgtcctgtcaggactatgctgctcggaacggt
atacaagtggagttagtgtgcaagcactcgggtcgctgcgtgaacgtgggtaatgcccac
cagtgtcagtgcctgcctggttacacgggcagctactgtaacgagatggtggatgagtgc
ctttccaacccctgccgcaacggggccacctgcatggactaccagggcacatatgagtgt
atgtgcaaggctggctaccagggggtgaactgtgaatatgatgtggatgagtgtcactct
aatccttgtcaccacggaggaacctgcatcaacctcataaaccgcttttcctgcgcctgc
ccacctggcactaatggtgttcagtgtgaggtgaatgtggacgactgtgctcccaagcct
ggctcctgggagcttcgctgtctgaacgggggccagtgtgtggacggggtgggacgctac
acctgctcctgcccccctggcttcgctggggaacactgtgagggggatgtcaacgagtgt
ctctctggtccctgccactctcctggtagcctggactgtgtacagctggccaatgactac
cagtgccgctgtcgcttgggctacacaggacgccactgtgagtccatggtggacctgtgc
cagtcgaagccgtgccataacagtggcacctgctccatgaacatgagctcagtgcatgga
tacacatgcatctgtcaaccaggcttcactggcttcaactgtggagaggtggagggctac
aattgtgccaagctgcgttgccagaacggtgggcactgccaggagtttcaggttggtcgt
ccgcactgccgttgccagccaggcttcagtgggccccgctgcgagaccgtccacagctgc
cagaaccggccctgtctgaacgggggcacctgtatgacgaaccaactctaccagtacagc
tgtcactgcccagcccacttctcaggcaggcactgtgagaatgtcatcttcgatccgtct
cccagcacccccgcttcctgcccctacgtagagtgtgagcagcattctggggataaggtg
tgtgacccgcagtgcaacagccatgagtgccaatgggacggaggggactgttctctatat
tggcgccagccatgggtcaactgcaccgccccggtgccctgctgggagctgttccgcaac
ggccgatgtgaccccgagtgtgacaactctggctgcctcttcgacagcttcgagtgtcag
gagagcgcacagtcttactgcaagtatgataagtactgtgcggcccactatgccaacaag
atctgtgataagggctgtaacacggaggcatgtggctgggacggcctggactgctctggg
gacacccctgctgttgtggctgatggaacgctggtgatcgtagtgttactgcagcctgag
gagctaatgagagacatgagaggcttcctgcgctccctgggaaccctgctgcacaccaac
ctccgtgtcaagatggacgaccagcagaaacctatgttgtatccgtactacggcctggag
cacgacgatgccaatgaagtacagccttctacaatgaagcttagaggcaaacgggagcta
gacaaggaggttatcgggtctaaggtgtacctggagatcgataaccgtaagtgttctgag
cgctccatggactgcttctccagcacagagctggctgcatccttcatcgctgctgagtac
ttgaaatctgagctgccctaccctgtggtctctgtcaacagtgaccctacggaaccccat
aagccccccttcctgctctacctggctgtgggagcagccgtcatcatcctgctgatctta
gtgctgggcgtgctggccgccaagaggaaacgcaaacacggcgacctctggctccccgat
ggcttcctggccaagaaggatgacaagaggcgagaacccgtgggccaggacgacttcggc
atgaagaacttcaagacccaggatggagggatgatggatggaggccagaggtggatggaa
gaggaggctcctccaaagaaagtaaggactgaggacaagcccctgctgcccatgggtgtg
gatggaggagtggacagacgggagtggaccctgcagcaccacaaggctgctgacatctct
ctcactccaccacagactgatctggaggcagactgcctggatgtcaatgtcaaaggacca
gatggcttcacccccctgatgctggcctctctacgaaacggaggggcatctgattgcggc
ctgcaggcggaggaggaggaagagagcgggggagacgagccgggacccaatgccatctca
gacctcatcacccagggtgcaacactcatggcccagacagaccgcaccggggagacggcg
ctccacctggctgctcgctacgcccgggccgacgctgccaagaggctgctggacgctggg
gcagacgccaacgctcacgacaacatgggtcgcacccctctccacgctgctgtggcagcc
gatgcccagggagtgttccagatcctgatccgtaaccgggccacggagttggatgccagg
atgaacgatggcaccacacctctgatcctggctgccaggctggctgtggaaggcatggtg
gaggaactggtacattgccacgctgacatcaacgctgtcgacgaccacggtaaatctgct
ctgcactgggcagctgctgtgaacaatgtggaggccactctggtgctgctgaagaatgga
gccaacagagacatgcaggacaacaaggagcagaccccgttgttcctggcagccagagag
ggtagttttgaggcggcccaggttctgctggaccactactctaatagggacatcacagac
cacctggaccggctgccccgcgacaccgcacaggagcgcatgcaccatgacatcgtacgt
ctgcttgaccagtacaacctggtccacagccctcacaatggccccaaccacatgggcggg
ggacactcttccttggtctgtggcggcaatggcgctggctacatgggcatgcgacccgga
ccccagggcaagaagagcaggcgcggtggggcaaaggttggaggggtgggtggggctaca
gcaaaagagctgaaagacatgaaggccaagcggagaaagaagccaacgggaggagaaggg
cctgcagtgggaggagccagtggcaacggcactaaagctgcaggagggctgtcggagagc
tcggtcaccatgtcccctgtcgactccctggagtctccacactcatacataggagatgct
gccggggcctccaaaacgaccaactctcctctcctgggcagcccctcctccaggcccctg
ttgcccccagtcagccacatgctgagccagcagcagagctgggtgggcctgaagcatggc
tacggtggccacatgttcagcctcctcccccagcagatgggcagtggccaccctagcatg
tcccagcaccacggccaaggcctgctcacccctatgaatgtcaccatgagccgtgagcag
ctgcctcccattgttaccttccaaatgatggcgccggggggcgggcaggccctgctgaag
cagccccagcctgggcaggtgcagtcccagggccaaaaccagggccagccccagggccag
ccccaatctcagcagggccctactcacctgcactgcacccagggcatgttgtaccagatg
cccaacatgagcctccagcacagcctgtctcacagcctccctcaccctcactcccatggc
ctggcccacggccacggcatggtgcaggatggccagtcacgccaacagctccctccctat
caggctatgcagagccccgtggataagtacccaacccctccttctcagcacagctacgct
acggctggctcggagagcaccaccccagggtatccggctcacccgcccagtgagcaccct
tacctcaccccctcccctgagtcccctgacccctggtcctcctcctccccccactccaac
tcagactggtctgacgtcaccaccagccccacacccctggggaacccccatgcactgctg
cctctccgccacacacacattccggagcaggtgcagctgcagccgcagtcccagcagaca
caacagaacccccagcagcctcagcgtggcaacatgcaggtgtttgcatag
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