Salvelinus namaycush (lake trout): 120052517
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Entry
120052517 CDS
T07522
Name
(RefSeq) calreticulin-like
KO
K08057
calreticulin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04141
Protein processing in endoplasmic reticulum
snh04145
Phagosome
snh04148
Efferocytosis
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120052517
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120052517
04148 Efferocytosis
120052517
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120052517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
snh03110
]
120052517
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
snh04091
]
120052517
Chaperones and folding catalysts [BR:
snh03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
120052517
Lectins [BR:
snh04091
]
L-type lectins
120052517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Motif
Other DBs
NCBI-GeneID:
120052517
NCBI-ProteinID:
XP_038855405
UniProt:
A0A8U0R5E3
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Position
8:complement(22518647..22523191)
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AA seq
413 aa
AA seq
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MTTMLMLLMAVLVASIFGESSVYFREEFEDGDAWKSRWVESKHKSDYGKFVHTAGKFYGD
VERNKGLQTSQDARFYSASSRFESVSNKDQALVIQFTVKHEQNIDCGGGYIKLFPADLNQ
EEMHGDSTYNIMFGPDICGPGTKKVHVIFNYKGKNHLINKDIRCKDDEYTHLYTLIVNPD
NTYEVKIDNKKVESGSLEEDWDFLPSKKIKDPDAEKPDDWDEKENIDDPEDKKPEDWDVA
ENIPDPDAKKPDDWDDEMDGEWEPPMVTNPDYKGEWKPKQIDNPAYKGKWVHPEIDNPEY
TADPEIYQYASMGVIGLDLWQVKSGTIFDNFLITNDPKLAEEVGNETWGATKDPEKKMKD
SMEEEERKKREAEEVNKKEEDEDKDEREEDEEEDYDEEEEEEAETDSKLKDEL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccatgttgatgcttttgatggccgtattggtcgcatcaatttttggcgagtcc
tccgtttatttccgagaagaatttgaagatggggatgcatggaaaagccgatgggtggaa
tccaaacacaagtcagattatgggaagtttgttcatactgctgggaaattctatggtgat
gtagagagaaacaaaggtcttcaaaccagccaggatgctcgcttttactctgcatcctcc
cgttttgagtccgtcagcaacaaagaccaggcactggtaatccagttcactgtgaaacat
gaacagaacattgactgtggtggaggctacatcaagctgttcccagctgatctcaaccag
gaggaaatgcatggagattccacatacaacatcatgtttggtcctgacatctgtggtcca
ggtactaagaaagttcatgtgatcttcaactacaaaggcaagaatcacttaatcaacaaa
gacataagatgcaaggatgatgaatatacccacctgtacacactgatagtcaatccggat
aacacctacgaggtgaaaatcgacaacaagaaagttgagtctggaagcctagaggaggac
tgggacttccttccctccaagaagataaaggaccctgatgctgagaagccagacgactgg
gatgagaaggagaacattgatgatcctgaagacaagaaaccggaggactgggatgttgct
gagaacatccctgaccctgatgccaagaagcctgatgactgggatgatgagatggatggt
gagtgggagcctcccatggtcacgaacccggactataagggggagtggaaacccaaacag
attgacaatcctgcctacaaggggaaatgggtgcaccctgaaattgacaacccagaatac
actgctgaccctgaaatctaccaatatgccagcatgggggtgattggattggatttgtgg
caggtgaagtcgggcactatttttgacaatttcctcatcaccaatgacccaaaacttgca
gaagaagttgggaacgagacatggggtgcaacaaaggaccctgaaaagaagatgaaggac
agtatggaagaagaggagagaaagaaacgtgaggcagaagaggtgaataaaaaggaggaa
gatgaagataaagacgagagggaggaggatgaggaagaagactacgatgaggaggaagaa
gaggaggcagaaacagactctaaactcaaggatgagttataa
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