Salvelinus namaycush (lake trout): 120052527
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Entry
120052527 CDS
T07522
Name
(RefSeq) guanine nucleotide exchange factor DBS-like
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120052527
Membrane trafficking [BR:
snh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120052527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
SH3_9
SH3_1
SH3_2
PH_10
DUF7799
hSH3
GlutR_dimer
Spectrin
CRAL_TRIO
RHG20_PH
DUF6103
Motif
Other DBs
NCBI-GeneID:
120052527
NCBI-ProteinID:
XP_038855421
UniProt:
A0A8U0UKX8
LinkDB
All DBs
Position
Sna8:23214709..23280690
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AA seq
1109 aa
AA seq
DB search
MKRTRPVIDEIMQQEIRPLLAVDIIEQLHRQFALLSGGRGKDGAPIITFPEYSGFGDLVA
EDFQNVVTYLTSIPSLDVASIGFVIIIDRRRDKWSSVKASLTRIAGAFPGNLQLVLVLRP
SRFFQRAIADIGIKLHRDDFKMKIVMLNSLSDLYGYVDKGQLTCELGGNLDYCHSQWIHR
RTAIENFAVTVKTTAQMLQKFGTDLAETELPNDVQCTKDLLTTHTEKHDKLKDELKLAMK
QGTTLLGCIKEQAAKSENHQLNPDEMENHTTVERLLAQLDETENAFEQFWSKHHLKLEQC
LQLRHFEHDFREVKVSLDSLMATLTALSDIGDCVTLVEMLLKDLKTLEEKAQESLEKAQL
HALHGDQLIQSNHYSVDSIRPKCVELRHICDDFTNEAQKKYDVLSKSRQIHKGIDKVNQW
CESGVYLLASQAVDKCQSQEGAEAALQDIEKFLETAKENQLSDLKNIHNQYELVLNVEVK
ANVQKALKRLDDVQEMFEKRQVSLKKLSVKQTRPVQPVAPRPESSPKRPAPHKTPRTTCP
APALSRRISENSSATKQPTEAELAKRKNVSRKVKGSLKIEVMHEASQGGSSHVLVTNETE
ESLSNRRRHIMNELIETERLYVEELQSIIEGYAAELDNTELSPLIPAALENKKDVLFGNL
PEIYEFHNRTFFKELENCMERPELVGTCFLKRKEELQIYEKYCQNKPRSEALWRQCGDSL
FFQECQKKLDHKLSLDAYLLKPVQRITKYQLMVKEMLKCSKNQEGTVELEEALATMLDII
KSVNDSMHQIAITGFEGNLSELGKLLMQGSFNVWTDHKKGHSKVKDLARFKPMQRHLFLY
NKMLLFCKKREETTDGHEKPSASYSFKHSLKMSAVGITENVKGDIKKFEVWYNGREEVYI
IQAPSMDVKNMWVSEIRKVLTGQLEACREASQLHQKITENVYHAPMRNIRKMALRQSDSS
SPETGFRRSNPSPNMRQKRGWTQRCLPSMDTEDFETIHSSAEELSNSSDGEDDSSNKNDH
DRFRVQLTYESRTAQDLSLESGDLVQFLEEAEDGHWLVKNLIPQKTGLVPPSVLQTAAGD
IFSDMCTAALSDSEENENPTWGDVSQDSR
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaccagacctgtcatagatgagatcatgcagcaagagatcaggcccttgctg
gctgtcgacatcatagagcagctgcaccggcagtttgccctgctctcaggaggaagaggg
aaagatggtgccccaatcatcaccttccctgagtactcaggcttcggcgacctcgtagcg
gaggacttccagaatgttgtaacatatctgaccagcatccccagtttggacgtggccagc
atcggttttgttataatcatcgaccgcaggcgggacaaatggagctcagtgaaggcctcg
ctgacgcggatagcgggagcatttccagggaacctccagctggtgttggttctaaggccc
tcccgcttcttccagagggccatcgctgacattggcattaagctgcaccgggatgacttt
aaaatgaagattgtgatgctcaactccctatctgacttatatggctacgtggataagggc
cagctaacatgtgagcttggtgggaacctggactactgtcacagccagtggatccaccgc
cggacagccattgagaactttgctgtgacggtgaagaccacggctcaaatgctgcagaag
ttcggtacagacctggcagagacggagctgcccaatgatgtgcagtgcaccaaagaccta
ctcactactcacactgagaagcacgacaaactcaaggatgaactgaaattagcgatgaaa
cagggaaccactctactgggctgtatcaaagagcaggctgccaagtctgagaaccaccag
ctaaacccagacgagatggagaaccacaccactgtggaaaggttgttggcccagctagat
gagacagaaaacgcgtttgaacagttctggtctaaacatcacctcaaactggagcagtgc
ctacagttacgccattttgagcatgacttccgagaggtgaaagtgtcattggacagtctg
atggcgactctgacagccctgtcagacattggggactgtgtcaccctggtagagatgtta
ctgaaggacctcaagaccttagaggagaaggctcaggagtcgttagagaaggcccagctc
catgccctacacggggaccagctgattcagagcaaccactattctgtggactccatacgg
cccaagtgtgtggagctccgacacatctgtgatgacttcaccaacgaagcccagaagaag
tacgacgtcctctccaaatcacgccaaatacacaaaggcatagacaaggtgaaccagtgg
tgtgagtcgggggtgtacctgctggcctctcaggctgtggacaagtgccagtcccaggaa
ggggctgaggcagccctgcaggacattgagaagttcctggagacggccaaggagaaccaa
ctgagtgacctcaagaacatccacaaccagtatgagctagtcctcaacgttgaagtcaag
gctaatgtacaaaaggctctaaagaggctggacgatgtacaggagatgtttgagaagaga
caggttagtctgaagaagttgtcagtcaaacagacccggcccgtccagcctgtggccccc
cggcctgagtcctctcccaaacggcctgcgccccacaaaacacccaggactacctgccct
gcccctgcactcagtcgaaggatctcagagaactctagtgccacaaagcagcccacggaa
gctgagcttgcaaaaaggaaaaatgtaagccgcaaagtcaaagggagcctcaagattgag
gtaatgcatgaggcaagccagggaggctccagccacgtcctggtgacgaacgagacagag
gagagtctttcaaacagacggagacacatcatgaacgagcttattgaaactgagaggctg
tacgtggaggagctgcagagcatcatagagggatatgctgccgagctggacaacacagag
ctttcccccctcatccccgcagccctggagaacaagaaagatgtactgtttggcaatctc
ccagaaatatatgaatttcacaacaggacatttttcaaagagcttgaaaattgcatggaa
aggccagaattggtagggacctgctttttgaaaaggaaagaagagctgcagatctatgag
aagtattgtcagaacaagcctcgatcagaggcactgtggagacagtgtggagacagcctg
ttcttccaggaatgtcagaagaagctggaccacaaactctccctggatgcctatttactc
aagcctgtgcagaggatcaccaagtaccaactgatggtcaaggagatgctgaaatgcagt
aagaaccaggagggtactgttgaattggaggaggcccttgccaccatgctggacatcatc
aagtctgtcaatgactccatgcatcaaattgccataacgggattcgaggggaaccttagt
gagctgggcaagctcctgatgcagggctcattcaacgtgtggacggaccacaagaagggc
cacagcaaggtgaaggacctggcccgcttcaagcccatgcagaggcacctgttcctctac
aataagatgctgcttttctgtaagaagcgggaggagaccacggacggacacgagaagccg
tccgcctcatatagcttcaaacactccctaaagatgagtgctgtgggaatcaccgaaaat
gtcaaaggagacattaagaagtttgaggtctggtataacggcagagaggaagtttatata
attcaggctccctccatggatgtgaagaacatgtgggtgtcagagatccggaaagttctg
acaggccagctagaagcttgcagagaggctagtcaactccatcagaagatcactgagaat
gtgtatcatgctcccatgagaaacatacgcaaaatggccctgaggcagtcggactcgtct
agcccggagacaggcttcaggaggagcaaccccagccccaacatgagacagaaacgaggc
tggacccaacggtgtttgccttcaatggacacagaggactttgaaaccatccattcgagt
gcagaggagctctccaactcttcagatggcgaggatgattccagtaataaaaatgaccat
gatcgcttccgtgtccagttgacatacgagtcgaggacagcgcaggacctgtctctggag
tcaggagatttagtacagttcctggaggaggcagaggatggccactggctagtcaagaat
cttattcctcagaagacaggtctggtaccgcccagtgtacttcagacagcagcaggagat
atcttcagtgacatgtgcacagcagctctgtctgactctgaggaaaatgaaaaccctacg
tggggagatgtatctcaggacagcagatag
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integrated database retrieval system
