Salvelinus namaycush (lake trout): 120052544
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Entry
120052544 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120052544
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120052544
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120052544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
TRAF3_RING
Prok-RING_4
Cas12f1-like_TNB
YthB
Motif
Other DBs
NCBI-GeneID:
120052544
NCBI-ProteinID:
XP_038855444
UniProt:
A0A8U0UIZ3
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All DBs
Position
Sna8:25105020..25132445
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AA seq
253 aa
AA seq
DB search
MNQTMQPSHSSHPRTPLRSVHLRATETGSALCVCKLPASLYRPTVAISSVNTSQICPSAG
HRDWLCPVCLQTASFPVQTNCGHLFCAPCLISYWRLGSWLDAISCPLCRQRVSVLCRLVG
EGRSDRKEREVLGEITDYNKRYSGTPRRVTDYLCDTPLFLQLLARSLGAMGGLVCLFFVR
VVLCCLGAMVSLYSAPLDTPSSLSGLLGVLDDLVVVFLLLTCVININQQMAPESGNSSAH
TATQGVGLLSNSL
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaccatgcaaccctcccacagctctcatcccagaacacctctcagatctgtc
catctgcgggccacagagactggctctgccctgtgtgtctgcaaactgccagcttccctg
tacagaccaactgtggccatctcttctgtgaacacctctcagatctgtccatctgcgggc
cacagagactggctctgccctgtgtgtctgcaaactgccagcttccctgtacagaccaac
tgtggccatctcttctgtgctccctgtctgatctcgtactggagacttgggtcctggctg
gatgccatcagctgccctctgtgtagacaaagggtcagtgtcctgtgtcgtcttgtcggt
gagggtcggtcagacagaaaggagagggaggttctgggagaaatcacagactacaacaaa
cgctactcaggaacccctcgaagggtgacagactacttgtgtgacacgcccctgttcctg
cagctgctagctcgcagcctgggcgctatgggggggctcgtgtgcctcttctttgtcaga
gtggtgctctgctgtcttggggccatggtgtccctctactctgcccccctggacactcca
tcctccctgtctggcctcctgggggtcctggatgacctggtggtggtcttcctgctgctc
acctgtgttatcaacatcaaccagcaaatggcgccagagagtgggaactcctcagcacac
acagccacacagggagtaggtctgctcagtaactcactgtag
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