Salvelinus namaycush (lake trout): 120052549
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Entry
120052549 CDS
T07522
Symbol
atxn1l
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120052549 (atxn1l)
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Gene cluster
GFIT
Motif
Pfam:
AXH
ATXN-1_C
Motif
Other DBs
NCBI-GeneID:
120052549
NCBI-ProteinID:
XP_038855454
UniProt:
A0A8U0R8H9
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Position
Sna1:complement(64240628..64243681)
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AA seq
788 aa
AA seq
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MKPGHERNQECLPPKKRDLNNSTSCRGEEVPSTQSSGVGGDTQGGGTAEEWLHAQPGLHY
GVESAEGLQGLPVDQYSMLYRVALPSVSYSQTSLHPVLSHISPAYTVPSSLLQHHPGISY
PPLGYAQIPHSSFQFVSPYGAVPYAVPPGFVPSTLISPSVALSQPHLVPYQSVIQEGLVS
PPTQAHVSAHAFAKVGSSGGVPLMLTSEQAAQHQQHLGPLPAAELSPRGVPVFYHPQGTR
AAPAPRDPYSREQETDRDREVNGGEREQAAREMLQDSVYNARNARLLQAASASAALEHAQ
DRSLKSRRLDERASPGQRSTPDTDLEVQQVVGRLASPVQGVSGGRKEVSFGPLNLSQGSQ
RGREAHGEAGESAGRTAYAIHPAVYGDPRVTAHQQQAGQPGHAVILANGQTVLVPLDYHQ
HQQPPQHYPSQTNDDTSAVTMASPTTYSKASESPARVCLPDRAVVELAAVEQQPISVPFA
AALTQALAPAPTPAPSNPSHFMKGAIIQLATGELKRVEDLQTQDFVRSAEVSGGLKIDSS
MVVDIRTSQQRPGLVALHFTVGEQQSKVTIDVPPEHPFFVFGQGWSSCSPERTAQLYGLA
CHHLQVGDVCVSITLQQPPQRQKQPLQQQQQQQQTQARTSTKVNSTSGAIGQPMGPPAPQ
QPRPQPHFRMERVHRERERGDKEEPMQLGGVGQSEMPTRPNRTSAEHTRSQSSYYLHTEG
SARPGAGVGVVSTVSSASQRRWSAPGLQRYMKVEEGAHPQLCPSGSSRPSFIPQEVKLSI
EGRSNAGK
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgggtcacgagcgcaatcaggagtgcctgcctcccaagaagagggatctcaac
aacagcaccagttgtaggggggaggaagtgccctccactcagagctcaggggtcggtggt
gacactcagggaggtggcacagcagaggagtggctgcatgctcagcctggtctacactat
ggagtagagagtgctgagggcctccaagggctgcctgttgaccagtacagcatgctctat
agggtggctctcccctctgtctcctactcccagaccagtctacacccagtgttaagccat
atctctccagcttacactgtcccctcatctctcctacagcatcatccaggtatctcctat
ccccctctaggctatgcccagatcccccactcctctttccagtttgtctctccatacggt
gcagtcccttatgcagtcccccctggctttgttcccagcaccctgatctccccctcagtt
gccctctcccagccccacctggtcccctaccagtcagtcatacaggaggggttggtctcc
cctcctacccaggcccatgtatctgcccatgcctttgccaaagtggggtcgtccggaggg
gtcccgctgatgctgacctcggaacaggctgcccagcaccagcagcacctgggcccgctg
cccgccgcagagctcagtcctcggggagtgcctgtcttttaccaccctcagggcaccagg
gctgcgcctgcccccagggacccctacagcagggagcaggagacagacagggatagggag
gtgaatgggggggagagggagcaggcagccagggagatgctccaggactcagtctacaat
gccaggaatgcaaggctgctgcaggcagcatctgcctctgcagcactggagcacgcacag
gacagaagcttgaagagccgcaggctggacgagagggcttcgcctgggcagcgcagcacc
ccagacactgacctggaggttcagcaggttgttggtcgcctagcctctcctgtccaaggt
gtgagtggagggcgcaaagaggtgtcctttggtcccctgaacctatcccagggctcccag
agaggcagagaggctcatggggaggcaggggagagtgctggccggacagcatacgcgatc
caccctgcggtgtatggagaccccagggtgacggcccatcaacagcaggcagggcagcca
ggccacgcggtcatcttggccaatggacagacagtcctggtccccttagactatcaccaa
catcaacagccaccccagcactaccccagccagaccaatgacgacacctctgctgtcacc
atggcctcccccaccacctactctaaagcctctgagtctccagccagagtgtgcctccca
gacagggctgtggtggaactggccgccgtggagcagcagcctatttctgtcccattcgcg
gcagccctcacgcaggccttggccccggcgcccacccctgccccctccaatccctcccat
ttcatgaagggggccatcatccagctggccacgggggagctgaagcgcgtggaggacctg
cagactcaggattttgtgcggagtgctgaggtgagcggggggctgaagatcgactccagc
atggtggtggacatcaggaccagccagcagagacccggcctggtggcgctgcacttcaca
gtgggcgagcagcagagcaaggtgaccattgatgtgcccccggaacaccccttctttgtg
tttgggcagggctggtcctcctgcagcccagagcgcacggcccagctctatggcctggcc
tgccaccacctgcaggtaggagacgtgtgtgtgtccatcactctgcagcagccgccccag
cgacagaaacagcccctgcagcaacagcagcagcagcagcagacccaagccaggacttcc
accaaagtcaactccacatcaggggccatcggccagcccatggggccccctgccccccag
cagcccaggccacagcctcacttcaggatggaacgtgtccacagagagagggagaggggg
gataaagaggagcccatgcaactagggggtgttgggcagagtgagatgcccaccagacca
aataggacttcagcagagcacactaggagccagagcagttactatttgcacacagagggt
tctgctcgtccaggggcgggggtgggagtggtgtcgacagtgtcgagcgcgtctcagagg
cgctggtctgcccccggccttcagagatacatgaaggtagaggaaggggcgcaccctcag
ctgtgcccctccggctcctctcgaccctccttcatcccacaggaggtcaaactgtccatc
gaggggcgctctaatgctgggaagtag
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