Salvelinus namaycush (lake trout): 120052564
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Entry
120052564 CDS
T07522
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24-like
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120052564
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120052564
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120052564
Peptidases and inhibitors [BR:
snh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120052564
Ubiquitin system [BR:
snh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120052564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
DUF3517
UBA
UBA_7
ubiquitin
Motif
Other DBs
NCBI-GeneID:
120052564
NCBI-ProteinID:
XP_038855475
UniProt:
A0A8U0R563
LinkDB
All DBs
Position
Sna8:26415645..26462928
Genome browser
AA seq
2585 aa
AA seq
DB search
METEEEQHMTTLLCMGFPDAVAIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGPA
PGPSGDGESSGRTGTGGFDPPPAYHDVVESERSNDENGNCSGRSMEFPTTNLYELENRVF
TDHWSIPYKREESLGKCLVAATCLAKHGLADADENCKQFMDRCMHEAFKKLLTSSAVHKW
GTEIHEGIYNMLMLLVELVAERVKRDPIPVGVMGVLTIAFNPDNEYHFKNRMKTCQRNWS
EVFGEEAMFAVSPSNSYQKEPHGWLVDLVNRFGEMGGFTAIQAKLNTQEIEIGCVSALVQ
PLSVCAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKRLVSIPELLSAIKLLCMRFQ
TTLVTVVDDLRLDTLLRMLKTPHFSTKMNSLKEVTKLIEESTVSKTVKNAIDTDRLLDWL
VENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDELSKIWMIQAGQSSTVIENIHTI
MAAAAVKFNLDQLSHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSEATTGKVLEVLW
ELAHLPILPTSLVQQASEEHLAILTDAYAVKETVKRCYIIKCIEDIKKSSQQGSPQAVWV
VPALRQLHEITRSFIKQTYQKQDKSIIQDLKKNFEIVKLITGSLVVCHRLAVSAAGSNGL
AGYTLVDGRYTYQEYLDGHLKFLAFFLQEASLYLVWNRAKELWDCLVSGPEVCELDREMC
FEWFTKGQHDLESDVQQQLFKEKILKLEPYEITMNGFNLFKTFFENVNLCDHRLKRQGTQ
LCVERLDLSGMDFIWRIAMETPDEEIANEAIQLIITYSYTNLNPKMKKDSVSLHKKFIAD
CYKRLEAASSALGGPTLTHAVTRATKMLTATAMPTVATSVQSPSRSTKLVIIERLLLLAE
RYVITIEDLYSVPRTILPHGASFNGHPVSLHVTYESTKDTFTLEAHSNETVGSIRWKIAE
HLSCPVDNVQIFANDSVLTMNRDQKLLSQLGFNDEQSLTVKSSGTGTPSGGSSESSASAS
SSSSAVFNSAYAMEQEKCLPGVVMALVCNVFEMLYQLANLDEPRTTLRVRKLLLLIPTDP
EVQDALDNFVPKESSVWSHQKTLFTLGQGSGSRSPSLGSKQQHQPSAASILESLFRSSAP
GMSTFRVLYNLEVLSSKLMPTSDDEMAKTSVKSFCENFLKAGGLSLVVNVMQRDSIPSEV
DYETRQGVYSICLQLARFLLVGQSMPSLLDDDVIREGDTLSSRPFRNAGRPGRQLSLCGT
PEKSSYRQMSLSERSSIRVEEIIPAARVAIQTMEVGDFTSTLACFMRLTWAAAAGRLDLV
GSPQPIRPEHSSLLPLGVRTRVSSTGSNCSSSSEGEAPPTALHAGICVKQQSVSIKDCII
AREALSLLVTCLQLRTQQLGSFYILPCVSDFIIDILLGSASGEIRRVACDQLYTLSQSDS
SAFPEIVKPNVFLLRVVLASQLPLWSPTSVMRGVNQRLLSQCTEYFDLRCQLLDDLTSSE
MEVLSVSAVAMLEDEISWLDNFEPSWSSEMETSEADNILQAGHLRLIKTLLSLCGTEKEQ
LGPSLIQQLLDDFLFRASRIILNTSNPASSSPPSHDFFPKCSTASSRLAAYEVLVMLADS
SVANLQLITRELLSMHHQSDPSLSKEFDFLPPVDSRSVSGFVGLKNGGATCYMNAVFQQL
YMQPGLAEAFLSIEDDTEQPDESVFCQVQSLFGHLMESKLQYYVPENFWKIFKMWNKELY
VREQQDAYEFFTSLVDQLDEHLKKIGREQIFKNTFQGIFSDQKICKDCPHRYEREETFMA
LNLGVTSCQSLEISLDQFVRGEVLEGTNAYYCEKCKEKRTTVKRTCIKSLPSVLCIHLMR
FGFDWESGRSIKYDEQIRFPWVLNMEPYTVSGMARQDGGAEGGEGRGEAGGSPRKKVTIS
ENYELVGVVVHSGQAHAGHYYSFIKDRRGSARGRWYKFNDNVVEEFDMNDETLEYECFGG
EYRPKVYDQSNPYPDVRRRYWNAYMLFYQRISDQNSPVLPKKSRVSVMRQEAEDLTLSAP
SSPDVSPQSSPRPARANNDRLSVLTRLVRKGEKKGLFVEKMPARIYQMVRDENLKFMKNR
DVYNSDYFNFTLSLASVNATKLKHPAYQAMARVSLQLAVHFLFHTYLHTKKKLRVDTEEW
MTTVEVLLSKSSEACHWMAQYLVGPEGREITKVCLLECGVREVRVVVAAILEKTLESALH
FADSGLDSLTDALLSLLDKDVPENVKHCNQYFSLFSNFAQRGSGPCHLLLKHSAYRRMLI
FLLGPNRQNNQNRRWSPAQAREFLHLHSTLALMTLYSDLNTQHTHDQGVCKLIVSSIPAS
SRLLPLNADIMASLFSPEGQPYLLEVMFAMRELSGPLTVLIEMVTYCSFCNEPFSLGVLQ
LLKTQLETAPPHELKNVFQLLQELLVVEDALQTQRLKYAFESEKGLLALMHQSNNVDSSR
CYQCVKFLVTLAQKCPPAKDYFKDLSGHWSWAVQWLQKKMSEHYWTPQSNVSNETSTAKT
FQRTISAQDTLAYATALLNEKEPSGSSNGSDGSPANENADRSLRQGSESPMMLGDSKSDL
EDVDP
NT seq
7758 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaagaggagcaacatatgacaactctcctctgcatgggtttcccagatgca
gtggcgatacgcaaggcgctacgcctggcgaagaacgacatcaacgaggctgtggcgctc
ctgaccaatgaaagccccggtcttgggtatggatatgagccgatggagagtggccctgcc
ccaggcccaagtggagacggggagtccagcgggcggactgggactggagggttcgaccca
cctcccgcataccacgatgtggtggagagcgagaggagtaatgatgagaatgggaattgt
tcaggcaggagtatggagttccccaccactaacctgtatgaactggagaacagagtgttc
actgaccactggtccatcccctacaagagagaggagtcactgggcaaatgtctggtcgca
gccacctgcctcgccaaacacggtctggcggatgcggatgaaaactgtaagcagtttatg
gacaggtgtatgcacgaggcctttaaaaagctcctgaccagtagtgcggtccataagtgg
gggacagagatccatgaggggatctacaacatgttgatgttactggtggagctggtggct
gagagagtcaaacgggaccccatacctgttggcgtgatgggtgtactgactattgccttc
aacccagacaatgagtaccactttaagaaccgtatgaagacgtgtcagaggaactggagc
gaggtgtttggagaggaagccatgtttgctgtgtcacctagcaacagctaccaaaaggag
cctcatggctggctggtagacctggtcaatcggtttggagagatgggagggttcactgct
atccaggctaaactcaatacacaggagatagagattgggtgtgtgtctgctctggtccag
cctctatctgtgtgtgcagaatacctcaactccagcctggtgcagcccatgttggatcct
gttatccataagatgatcacctatgttcagaacctggaggagaaggacctgaaagacaag
aggctggtgagtatcccagaactgctgtcggccataaagctgctgtgtatgaggttccag
accaccctggtcactgtggtggacgacctgcgcctggacactctgctacgcatgctgaag
actcctcacttctctaccaagatgaactccctcaaagaggtgactaagctgattgaggag
agtactgtgtctaagacggtgaagaatgccattgacacagacagactgctggactggctg
gtggagaactctgtcctctcaatagcactggagggaaacatagaccaggcccagtattgt
gatcgaataaaaggcatcattgagttgctgggcagtaaactgtctctggacgagctctct
aagatctggatgatacaggcaggacagtcgtccacggtgattgagaacatccacaccatc
atggctgcagctgccgtcaagttcaacttagaccagctcagccacctgtttgtccttata
cagaagagctgggaggtagagagtgaccgtgtgaggcagaagctgttgagtctgattggg
aggatcggtagagaagcccggtctgaggccaccacagggaaggtgctggaggtgctgtgg
gagttagcccacctgcccatcctgcctacctccctggtacagcaggcgtctgaggaacac
ctggccatcctcactgacgcatatgctgtgaaggagactgtaaagcgctgctacatcatc
aaatgtatagaagacatcaagaagtcttcacagcagggcagcccccaagcggtctgggtg
gttccagctctgcggcagctccatgagatcacacgctccttcatcaaacagacctaccag
aaacaggacaagagcatcatccaggacttgaagaagaactttgagatcgtcaaattgatc
acaggatctttggtggtctgtcatcgattggctgtgtctgcagctgggagcaatggactg
gccggatacacactggtagatggacgatacacctaccaggagtatctagacggccacctg
aagttcctggccttcttcctccaggaggccagcctctacctggtctggaacagagccaaa
gaactatgggactgcctggtctctgggcccgaagtctgcgagctggacagagagatgtgt
tttgagtggttcactaagggccagcatgatctggagagtgatgttcagcagcagctcttc
aaagagaagatcctcaaattggagccctacgagattactatgaatggcttcaatctgttc
aagaccttttttgagaacgtcaacctgtgtgaccatcgcttgaaacgccaggggactcaa
ctgtgtgtggagcggctggacctgtctgggatggactttatctggcgcatcgccatggaa
acgcctgacgaggagatcgctaacgaggccatccagctcatcatcacctacagctacacc
aacctcaacccaaagatgaagaaggattctgtgtctttacacaagaagttcattgctgat
tgttacaagcgactcgaggcggccagttcagctctaggaggccccacgttgactcatgct
gttaccagggcaaccaagatgctgacggccaccgccatgccaactgttgctacgtcggtc
caatcaccttccaggtccaccaaactggtgatcattgagaggctgctgctattggctgag
cgttacgtcatcactatcgaggatctgtactctgtgcctcgtaccattctacctcacgga
gcatcgttcaacggccaccctgtctctctacacgtcacctatgagtccaccaaagacacc
ttcaccctggaggcccacagtaatgaaactgtaggcagcatccgctggaagatcgctgag
cacctcagctgtccagtcgacaatgtccaaatctttgccaatgatagcgtgttgacaatg
aaccgggaccagaagctgctgtcccagctggggttcaatgatgagcagtctctgacagtg
aagagctctggcaccggcacgccctctggtggcagctctgaatcctccgcctccgcatcc
tcctctagctctgcggtcttcaactccgcctacgctatggaacaggagaagtgccttcca
ggtgttgtcatggcgttggtgtgcaacgtgtttgagatgctctaccagctggccaacctg
gacgaaccccggacaaccctgcgtgtgcgtaagctgctgctgctgatcccaacagaccca
gaggttcaggatgctctagataactttgttcccaaagagtccagtgtctggagtcaccag
aagacgctgttcaccctgggtcaggggtcaggctctcggtctccgtctctgggttctaag
cagcagcaccagcccagtgctgcctccatcttggaatcactcttcagatcctctgctccc
gggatgtccaccttcagagtcctctacaacctagaggtgttgagttctaagttgatgcca
acctcagatgatgagatggctaagaccagtgtcaagtctttctgtgagaacttcctgaaa
gctggaggtctcagtttggtggtgaacgtgatgcagcgagactctattccctctgaggtg
gactatgagaccagacagggagtctactccatctgtctacaactggccaggttccttttg
gttggccagagtatgccgtcgttgctggatgatgatgtcatccgagagggcgacacgctg
tctagtcggccgttccgtaacgcggggcgaccggggaggcagctgtcgctgtgtggaacg
ccagagaagagctcctatagacagatgtctctgtctgaacgctcctccatcagagtagag
gagatcatccctgctgcacgcgtagctatacagacgatggaggtgggggacttcacctcg
acgttggcgtgcttcatgcgtctgacatgggcagcagccgctggccgattggacctcgtc
ggcagtccacagccaatcagacctgagcacagctcgctccttccacttggggtccgcacc
cgtgtcagcagcactggaagtaactgcagctccagcagtgagggcgaagcgccgcccaca
gctctgcatgctgggatatgcgtgaagcagcagagtgtttctattaaagactgcatcatc
gctagagaggccctgtcactactggtcacctgtctacagctacgaacacagcagctaggc
tcattctacatcctcccctgtgtcagcgacttcatcatcgacatcctgctaggatcagcc
agtggagagatccggcgcgtggcatgtgaccagctgtacactctgagccaatccgacagc
tctgcgttccctgagatcgtcaaacccaacgtgttcctgctccgagtcgtcctcgcctcc
cagctgcctctctggagccccacgtctgtcatgagaggagtcaaccagaggttgctgtca
cagtgtacagagtactttgacctgcgatgtcaactactggatgacttgaccagttcggag
atggaggtgttgtcagtgagtgcggtggccatgttggaagatgagatcagctggttggat
aactttgagcccagctggagctctgagatggagaccagtgaggctgacaacatcctgcag
gctggacacctccgcctcatcaaaacactactgtcactctgtggcacagagaaggaacaa
ctgggtccctctctgatccagcagctgttagatgacttcctcttccgagcatcccgcatc
atcctgaacacgtctaaccccgcctccagctccccccccagccacgacttcttccccaag
tgcagtacggccagcagtagactggcagcctacgaggtgctggtgatgctggcagacagc
tctgtggccaacctacagctcatcaccagagaactgctgtccatgcaccaccagtcagac
ccctcgctcagcaaggagtttgacttcctcccgccggtggacagtcgctctgtgtcgggg
ttcgtagggttaaagaacggtggagccacctgctatatgaatgctgttttccagcagctg
tacatgcagcctggcctggctgaggcctttctgtctatagaggacgacacggagcagcca
gacgagagtgttttctgtcaggtccagtctctgttcggacacctgatggagagcaagctg
cagtactacgtccctgagaacttctggaagatctttaagatgtggaataaggagctgtat
gtacgagagcaacaggatgcttatgagttcttcacttcactggtggaccagttggacgag
caccttaagaaaatcggccgtgagcagatctttaagaacactttccagggaatcttctct
gatcagaagatctgcaaagactgtcctcaccgatatgagcgagaggagacgtttatggcg
ctgaacctgggtgtgacttcgtgtcagagtctggagatctcattggaccagttcgtcagg
ggggaggtgctagaaggaaccaacgcctactattgtgagaagtgcaaggagaagcgtacc
acagtgaagcgcacctgcataaagtccctgcccagtgttctctgtatccatctgatgcgt
ttcggcttcgactgggagagcggacgctccatcaaatacgacgagcagatcaggtttccc
tgggtgctgaacatggagccctacacagtgtctggcatggctcgtcaggatgggggggcg
gaggggggagagggccggggggaggcaggtggctcacccaggaagaaggtcactatctct
gagaactacgagctggtgggagtcgtagtccacagcggacaggcacacgctggacattac
tactccttcataaaggaccgacggggaagtgctagaggaaggtggtataagtttaatgac
aatgtggtcgaggagtttgacatgaacgatgagacactggaatacgaatgctttggagga
gagtaccggcctaaagtctacgatcagtctaacccctacccggatgtgcggcggcggtat
tggaacgcctacatgttgttctaccagaggatcagtgaccagaactctcctgttctccct
aagaagagcagagtcagcgtcatgaggcaagaggcagaagacctcacgctttcggcgccc
tctagcccagacgtcagtccccagtcgtcccctcgccctgccagggccaacaatgaccgt
ctctctgtcctgacccgcctcgtacggaagggagagaagaaaggactgtttgtggagaag
atgcctgcaaggatctaccagatggtgagagatgagaacctgaagtttatgaagaacaga
gatgtgtacaacagcgactacttcaacttcactctgtcactggcctccgtcaacgcgaca
aagctgaagcacccagcctatcaggccatggccagagtcagtctccagctagcagtccac
ttcctgttccacacctacctccacaccaaaaagaagctgcgggtggacacagaggagtgg
atgactacggtggaggtgcttctgtctaaaagcagtgaagcctgtcactggatggctcag
tacctggtgggacctgagggacgagagatcaccaaagtgtgtctgttggagtgtggggtg
agggaggtgagggtcgtagtggcagccatcttggagaagaccttagagagtgcgctccac
ttcgctgactctggattagacagcctgaccgacgcgctcctctccctattggacaaagac
gttcctgagaacgtcaaacactgcaaccaatacttcagcctcttcagcaactttgctcag
agaggctctggtccgtgccatttgttgttgaaacactcagcgtatcgcaggatgctcatc
tttctcctcggacccaacagacagaacaaccagaatcggaggtggagtccagcccaggcc
agagagttcctgcacctccactccactctggccctgatgactctctactcagacctcaac
acacagcacacacatgatcaaggtgtgtgtaagctgattgtgagcagtatccctgcctcc
tcccgcctcctccccctcaacgctgacatcatggcctcgctcttcagccccgagggacag
ccttacctgctagaggtgatgtttgcgatgcgggagttgtcaggccctctgactgtgctg
atagagatggtgacgtactgctccttctgtaacgaacccttctccctcggagtactacag
ctgctcaagacccagttggagaccgctccaccccatgagttgaagaacgtgttccagctg
ctgcaagagctgctggtggtagaggacgctctccagacccagagactgaagtacgccttt
gagtcagagaaaggcctgctagcattgatgcaccagagtaacaacgtggacagcagccgc
tgctaccagtgtgtcaagttcctggttaccctggcacagaagtgtcctcctgctaaggac
tattttaaagatctgtctggtcactggagctgggcagtgcagtggttgcagaaaaagatg
tcagaacactactggactcctcagagcaacgtgtccaatgagacgtctacagccaaaacg
ttccagcgcaccatctcagcccaggacacgctggcctacgccacagcactgctcaacgag
aaggagccatctggcagcagcaacggctctgacggcagcccagccaacgagaacgcagac
cgcagcctccgacagggttccgagtctcccatgatgctcggtgattcaaagagtgatctg
gaggatgtcgacccttag
DBGET
integrated database retrieval system
