KEGG   Salvelinus namaycush (lake trout): 120052570
Entry
120052570         CDS       T07522                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1-like
  KO
K12171  E3 ubiquitin-protein ligase SH3RF [EC:2.3.2.27]
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:snh01009]
    120052570
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:snh04121]
    120052570
Enzymes [BR:snh01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     120052570
Protein phosphatases and associated proteins [BR:snh01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     120052570
Ubiquitin system [BR:snh04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    120052570
SSDB
Motif
Pfam: SH3_1 SH3_9 SH3_2 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-RING_4 zf-RING_11 zf-rbx1 zf-Nse Prok-RING_4
Other DBs
NCBI-GeneID: 120052570
NCBI-ProteinID: XP_038855483
UniProt: A0A8U0UK25
LinkDB
Position
Sna8:27000512..27053415
AA seq 869 aa
MDESVLLDLLECPVCLERLDATAKVLPCQHTFCRRCLQGILSSRAELRCPECRTLVECAV
DELPSNILLVRLLDGIKQRPRRAGPVAGVCTNGTAGVRMQGNGPRDSGAPGAQPQRGQAK
STPVRGVPQLPCAKALYNYDGKEPGDLKFGKGDVIILRRQVDENWYHGEIGGVHGFFPTN
FVQIIKPLPQPPPQCKALYDFELKDKEADKDCLPFTKDDILTVIRRVDENWAEGMLGDKI
GIFPISYVEFNSAARQLIELDKPGDSSGDSGEGASSGPQSNGGPHRAGEKKNSKKRHSFT
SLTMSHKPCLAPPPQRHSMEISGPVLISSSNPTAAARISEISGGLSCSAPSQVHICTAGL
IVTPPPSSPVTTATVFTFPPERSYASIPVDALPPPPPPPPQSSAVGAASSLAASQRPFPS
TSEQCGRQRPTVYVALFPYTPRKEDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVFP
GNYMSPVSRTVSGSTQPKVPLALCTQAGRGVTIVSPSTPLGAIVPGPDFNKALPICPGPA
LSSPLPAGMVTAAHVTTGQAKVLMHMTSQMTVNQARNAVRTAACHSQDRPTAAVTPIQSQ
TSVAYLAVCQSQTCSSSSNPAQGCVRAGVALGCAAASLTPPNVSAASLDGDALRQVAVLT
MPVAPGNGNSMSANASLACRLDKDGKREKKGILKLLSSNKKKSRPSPPSSPTLEAEQAAT
GEVFQGAMGPDITPSPSSAGIVVGNHGRAVPCPVEPESTAATASSSSSCSSAPELTHRKS
SPLDGCAPIAPPPRQACSSLTSQQHDARPILCERYRVVVSYPPQSDAELELKEGDIVFVH
RKREDGWFKGTLQRNGRTGLFPGSFVDII
NT seq 2610 nt   +upstreamnt  +downstreamnt
atggatgaatcagtgctgttggacttgctggaatgcccagtgtgtttggagcggctggat
gccacagccaaggtcctcccttgccagcacacattctgcaggcgctgccttcagggcatc
ctgagctcccgggcagagctgcgatgcccagagtgccgtacgctggtggagtgtgctgtg
gacgagctgcccagcaatatcctcctggttcggctgttggatggcatcaaacagagaccc
cgcagggcgggccctgtagctggagtctgcaccaacggcacagctggagtcaggatgcag
ggcaacgggcccagagactcaggcgctccaggagcacagccccagagaggccaggcaaag
agcaccccagtgaggggtgtaccccagctgccctgtgccaaggccctgtacaactacgat
ggcaaggaacctggggacctcaagttcggtaagggtgacgtcatcatcctgcgacgtcag
gtggatgagaattggtaccacggggagattggcggagtccacggtttcttccccaccaac
tttgtccagatcatcaagccactgccgcagcccccgccacagtgcaaggccctctatgac
tttgagctcaaagacaaggaggcagacaaggattgcctgccctttactaaggatgatatt
ctgactgtgattcgccgagtggatgaaaactgggcagagggaatgctgggggataaaata
ggaatcttccccatatcatatgttgagtttaactctgcggcccgccagctgattgagtta
gacaagcctggggactccagtggggactctggcgagggggcctcgtcgggcccccagagt
aacgggggcccccaccgggccggggagaagaagaacagtaagaagcgccactcgttcacc
tccctcaccatgtcccacaagccctgtctggccccgcccccccagagacactccatggag
atcagtgggccggtcctcatcagctcctccaaccccacggcagccgcacgcatcagcgag
atcagcggaggactgtcctgcagcgcaccctcacaggtacacatctgcacagctggactc
atagtgacccctccccccagcagtcccgttactacggcaactgtcttcacgtttcccccg
gagaggagctacgcatccatccctgtggatgctctccctcctcccccgccgcctccacca
caatcctcagcggtgggagcagcctcctcgttggctgccagtcagagacccttccccagc
actagcgaacagtgtgggcggcaaagacccacagtctacgtggccctgtttccctacacc
ccacgtaaggaggatgagttggagctgaggaagggagagatgttcctggtgctggagcgc
tgtcaagatggatggttcaaaggcacatccatgcacactggcaagataggagtgtttcct
ggcaattacatgagccccgttagcaggacggtgtccggcagcacccagcccaaagtgccc
cttgctctgtgcacccaggctgggcgaggggtcaccatcgtcagcccctccactcctctg
ggggccatcgttccagggcctgacttcaacaaggccctccccatctgcccgggccccgcc
ctctccagccctttacccgcgggcatggtgacggctgctcacgtgacaacgggacaggcc
aaggtgctcatgcacatgacgtcccagatgactgttaaccaggcacgcaacgctgtcagg
acagctgcatgccacagtcaggaccggcccacggctgctgtgacgcccatccagtcacag
acatctgtagcctacctggcagtgtgccaatcccagacctgctcctcctcctccaaccct
gcccagggctgtgtccgcgctggggtggctctgggatgtgctgctgcctccctcaccccg
ccaaacgtcagcgccgcgtccctggatggcgatgccctgcgacaagtggcagtcctcacc
atgcctgtcgcccccggcaacggcaactccatgtcagctaacgcctccctcgcctgtcgg
ctggacaaggatggcaagagggaaaagaaaggtattctgaagctgttgtcgtctaacaag
aagaagtctcgcccctctcccccctcatcccccaccctggaggcagagcaggctgctacg
ggggaggtcttccagggggccatgggccccgacatcaccccttctccctcctctgctggc
attgtcgtgggtaaccatggccgtgcagtcccctgccctgtggagcctgagtctactgca
gccactgcctcctcttcatcctcctgttcctcagccccggagttaacacaccgtaagagc
agccccctggatggatgtgcccccattgctccgccccctcgccaggcatgctcctccctc
acctcccagcagcacgacgctcggccaatcctatgcgaaaggtacagagtggtggtgtcc
tacccccctcagagtgatgcagagctggagctcaaagagggagacatagtgtttgttcac
aggaagagggaggacggctggttcaaaggaacactccagaggaacggcaggaccggactg
ttccctggcagcttcgtagacatcatctga

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