Salvelinus namaycush (lake trout): 120052584
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Entry
120052584 CDS
T07522
Symbol
kdr
Name
(RefSeq) vascular endothelial growth factor receptor 2 isoform X1
KO
K05098
kinase insert domain protein receptor [EC:
2.7.10.1
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04020
Calcium signaling pathway
snh04370
VEGF signaling pathway
snh04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120052584 (kdr)
04370 VEGF signaling pathway
120052584 (kdr)
04020 Calcium signaling pathway
120052584 (kdr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120052584 (kdr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
snh01001
]
120052584 (kdr)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
snh04090
]
120052584 (kdr)
Enzymes [BR:
snh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
120052584 (kdr)
Protein kinases [BR:
snh01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
120052584 (kdr)
CD molecules [BR:
snh04090
]
Proteins
120052584 (kdr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
Ig_2
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
VEGFR-2_TMD
ig
V-set
Ig_VEGFR-1-like_5th
Haspin_kinase
Chromo_MORC2_6th
Motif
Other DBs
NCBI-GeneID:
120052584
NCBI-ProteinID:
XP_038855507
UniProt:
A0A8U0R5A1
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All DBs
Position
Sna8:complement(28165889..28191675)
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AA seq
1361 aa
AA seq
DB search
MAKAFSVITLYFVANLLGASRVIALELRFMPDPPTLSIQEKVLRINTSDTLAITCSGRQN
LVWTTSYNLSRAGSRLSIVDCSGSGFFCIKLHISSATVNETGKYQCSYRDLAVEDRKTSV
AVYVYIQDYKVPFVPSDKDIDVVFIREGVQVVIPCRGSVENLNVTLHTNYPTKELYPNGK
DIFWDSMKGVSVPSHLISYAGLIFCQTRIHNETYRSPLYILTVVGYKIYDLTLTPAHERL
SVGEKLVLNCTAYTELSVAIDFTWTHPISLAPVNGSGRTYTTSHKKKLWSSLELSDTLTV
ENVTGNYTGKYTCTASSGKMVKTASASLVVFEKPFIDFDDHKWVKVLGVNASAQNIKIPV
KFDAYPEPTVRWYKNGRPIYKDDYRFKPARDSLMILGLAEKDAGNYTVVLINKITKEEQR
RSVQLLVNVPPHIIEKEVAVDTDVHMYGSSPTLRCTARGIPTPTRIQWQWMSREDCPLLF
QSGVVSSGVKLEDCTKWRDISNSTGPNPITQSSSDTGHLHKTVSSLKIQKAKVHTLYKCL
TSNKAGQDSRIIVFHVTRGLELSVSPSREPIEQDQVVLRCKADRLIYGNLAWFRVENKFD
PEQVPAVQSCRGLSLSKQPLSQAVLSGLQGTNVTLELPLTNVSRGDQGVYACQVENIKTG
ERTCLLRHLTLRALEAARILNNLTDQRVNVSATTMLICEVTGTPTPTVMWTKHNQTVVEG
SGVILSRLNQTLTIQRVKKEDGGLYTCTACNSRGCDTSQSNLITEGAEEKTNVELIVPIG
SVVIAMFFWLLIVFVIRSRKRPNNGDMKTGYLSIILDSEDMPMDEHCERLTYDANKWEFP
RDRLKLGDQLGRGAFGQVVEAAAFGIEKATTCTTVAVKMLKEGATSSEYRALMSELKILI
HIGHHLNVVNLLGACTKPGSPLMVIVEYCKHGNLSSYLKSKRGEYSPFKRRRPRSGQWER
MEEDVTEGDLGLGTSTHLDICTGTAVCSRLGEESSVSHVEEEDAESCEWEEHLTMEDLIS
YSFQVSKGMEFLSSRKCIHRDLAARNILLSENNIVKICDFGLARDVYKDPDYVRKGDARL
PLKWMAPETIFDRVYTTQSDVWSFGILLWEIFSLGASPYPGVGIDEAFCRRLKEGTRMRA
PDYATTEIYQTMLDCWLDKPTDRPNFTELVEHLGNLLQASAHQDGKDYIPLTAVEVEGGS
LSPEPRNPFTRIIREETHVPQIHCDNTPAISLGLSQQSDRCSRPLSVKTFDDVPVGHSSV
MEGQTDSGMCLSPEEMKSLDHQRHRTSNFSHIQRCKSKESLASESSNQTSGYQSGYHSDD
TDAPIYANEEMIMKRSIVKKPRPPKTADKFSVEVRYSAPPV
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggcattctccgtcattactttatatttcgtggccaatcttctgggagccagc
agggtgattgcattagaactccggttcatgcctgacccgccaacactgagcatccaggag
aaagtcctcaggatcaacacctcagacacactggcgatcacctgcagtggccgtcagaac
ctggtatggaccacatcctataatctcagccgtgctggcagtcgtctctccatagtagac
tgcagtgggtcaggattcttctgcatcaaattacacatttcctcggccaccgtcaatgag
actgggaagtatcagtgctcctacagagacctggcggtggaggatagaaaaacctctgta
gccgtttatgtctatatccaagactataaagtaccatttgtgccctctgacaaggacatt
gacgttgtgttcatccgtgagggagtgcaggtggtcatcccatgccgtgggtccgtggaa
aatctcaatgtcacgctacataccaactatcccacgaaagaactttatccgaacgggaag
gatattttttgggatagcatgaagggtgtctcagtccccagtcacctgatcagctacgct
ggattgatcttctgtcagacacgcatacacaatgagacctacaggtcacctctctacatt
cttacagttgttggatataagatctatgacctcaccctgaccccggcacatgagaggctg
tctgtgggagagaaattggtgctaaactgcactgcctacacagagctcagcgtggccatc
gacttcacctggacacacccgatcagcctggccccagtgaatggctctggtcggacctac
accacgtcacacaagaagaagctgtggagctctctggaactgtccgacacactcacagtg
gagaacgtgaccggcaactacacaggaaagtatacctgcacagcctccagtggaaaaatg
gtcaaaactgcatctgcatctcttgtggtctttgaaaagccttttattgattttgatgac
cacaagtgggttaaggttctgggggtgaacgctagtgcccagaacattaagatcccagtc
aagttcgacgcctacccagaacctacagtcagatggtataagaatggccggcctatttat
aaggatgactatagatttaaacctgccagggactctctcatgatccttggcctagctgaa
aaggatgctgggaattacaccgtggtcttgatcaataagataacaaaagaagagcagaga
cgctccgtccagctcttggtcaatgtccctccccatatcattgagaaggaggttgccgtg
gacactgatgttcacatgtacggcagcagccccaccctcaggtgcactgcccgtggaatc
cccacccctacacgcatccaatggcagtggatgtccagagaggactgcccactcctcttt
cagtcaggagtggtgagctctggggtcaagttggaggactgtaccaaatggagggacatc
agcaattccacagggccaaatcctatcacccaaagtagcagtgacacaggtcatttacac
aagactgtgagttctctgaagatccagaaagccaaggtccacaccctctacaaatgcctg
acttctaacaaagcgggacaagattcacgcattatcgtcttccatgtgacacgtggtctg
gagctgagtgtgtctccgtcccgtgagcccattgagcaggaccaggtggttctgaggtgt
aaggcagacaggctgatctatggaaatctggcctggttccgtgtggagaataagtttgac
ccagagcaggtccctgccgtgcagtcctgtcgaggcctgtccctgtccaagcagcccttg
tcccaggctgtcctctctgggctgcagggcaccaacgttaccctggagctgcccctgacc
aacgtgtctcggggggaccagggggtgtacgcctgccaggtggagaacatcaagactggg
gagaggacctgtctcctccgacacctcaccctcagagcacttgaagccgcgaggatcttg
aacaatttgacagaccagagagtgaacgtcagtgcgacgaccatgctaatatgtgaggtg
accggtacacccaccccgaccgtgatgtggaccaaacacaaccaaacagtggtggagggc
tctggtgtgattctgagccgattgaaccagaccctgacaatccagcgtgtgaagaaggag
gacggtggtctgtatacctgtactgcctgtaacagccggggctgcgacacatctcagagc
aaccttatcactgaaggagcagaggagaagactaatgtagagctgattgttcctattggc
tctgtagtcatcgccatgttcttctggctactcatcgtcttcgtcatccgcagcagaaaa
agaccaaataatggggacatgaagacagggtacctgtccatcatccttgactctgaggac
atgcccatggacgagcactgtgagaggctcacatacgacgccaacaagtgggagttccct
cgtgacaggctgaagctaggtgaccaattggggcgtggagcttttggacaggtagtagag
gcagcagcctttggcatagagaaagccactacctgtacaacagtggcagtcaagatgctg
aaagagggagccacctccagtgagtaccgtgcactgatgtcagagctgaagatcctcatc
cacatcggccaccatctcaatgtggtcaacctgctgggggcctgcaccaaaccagggagt
ccattgatggtgattgtggagtactgtaaacacggcaacctctccagctatttaaagagc
aagcgtggagagtacagccccttcaagaggaggcggcctcggtcaggtcagtgggagcgg
atggaggaggacgtgactgaaggggacctgggtttggggaccagcacccacttggacatt
tgcactgggacagcagtctgctccagactgggagaggagagctctgttagccacgtagag
gaggaggatgcagagagttgtgagtgggaggagcacctgaccatggaggacctgatcagc
tacagcttccaggtgtccaagggtatggagttcctatcctctcgcaagtgcatccatcgg
gacctagcagctaggaacatcttgctctcagaaaacaacattgtgaagatctgtgacttt
ggtctggccagagacgtctacaaagaccctgactacgtccgcaagggagacgcgcggctc
cctctgaaatggatggctcctgagaccatctttgaccgggtctataccacacagagcgac
gtgtggtcctttggcattctgctctgggagatcttctctctgggggcatctccataccct
ggtgttggcattgatgaggccttctgcaggaggctgaaggaagggaccaggatgagagca
ccagactacgccaccactgagatatatcaaaccatgttggactgctggctggacaaacct
accgacagaccaaatttcaccgagctcgtagaacatctggggaacctgctacaggccagc
gctcatcaggatgggaaggactacatccctctgacagcagtggaggtggaggggggctca
ctcagccctgaacccaggaaccccttcaccaggatcatcagagaggaaacccatgtcccc
cagatacactgcgacaacacacccgccatctccctcgggctctcccagcagagtgacagg
tgcagtcgaccactcagtgtgaagacttttgatgacgtccctgtggggcatagcagcgtc
atggagggtcagacggacagcggtatgtgcctatcaccagaggagatgaagagtctggac
catcagcgtcaccgcacgtccaacttcagtcacatccagcgatgtaagagtaaggagtct
ctggcctccgagtcgtccaatcagacgagtgggtaccagtcaggctaccactcagacgac
actgacgcacccatttatgctaatgaggagatgatcatgaagagaagcattgtaaagaag
ccacggccgcccaaaacagcagacaagttcagtgttgaggtgcgctacagtgcaccccct
gtttag
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