KEGG   Salvelinus namaycush (lake trout): 120052716
Entry
120052716         CDS       T07522                                 
Name
(RefSeq) ataxin-2-like protein isoform X1
  KO
K23625  ataxin 2/2L
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:snh03019]
    120052716
Messenger RNA biogenesis [BR:snh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     120052716
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 120052716
NCBI-ProteinID: XP_038855720
UniProt: A0A8U0R600
LinkDB
Position
Sna8:complement(44832620..44860708)
AA seq 991 aa
MSFRRQNQQPGSGGRKTSNGTAGPAALPSHISGNNTNRAVPGRTRNTMKPPSQSSPVFEG
VYNNTRMLHYLTAVVGSTCDVRVKSGNVYEGIFKTLSSRCELVVDAVHKRSEGGEADGGG
GGGLPPSLPRIEEITDTMIFSPGDLVTMTCRDVDLNYAIRDAFTDTAIGSSRVNGEHREK
VLQRWDGGDSNGEGFDLETDTSNGWDASEMFKFNEETYGVTSTYDSSLSMYTVPLERGSS
DGFRQREARAARLANEIEGSPQYRHRTNLENDDKSEEDKYSAVVRERDEGRERGSPGFQS
SAGSREGKYIPLPQRAREMGVPPSSLRGGASGPIPNRTGVPGSSRPSQGSDRCSPLSIRG
AYSPHQSQASPPGQPSSPTPSSTSHPIPHSISHPQALADASRSSVNGVSSRTSPKAQRSV
QTNRTLRNPSSQSSPAVSRSPKPDDPALAGPSYLDTSSSSIASATPKSSGPTPLFTVDVN
EILSSAAKERTEGPASPQDSKSGKVPSVLQRTQLEELRKFGKEFRLQPSPSPSAGPTSSE
SAQPSPSDSATTAESVTAPGHTPSQDPQTGEGSSFTLTPTTPTPSLSPNTSSQSSGPDRQ
ATGTPQPARSPGSEEEGSERAEGVADQVKKSTLNPNAKEFVFKAPMTLVKPSPAPTPPRP
TPPSPSVVLQPPPGQQAIYSTPYLSYLSPVQIQGHSVQAPQMYQYTMSTVQQGKYPRSKG
QVVGPRPDHHGSSQPQMLQAAASAAGPPLVASPYPQAYLQYSQVIQGMPHYPGQPVYSML
QGGARMLTQAGHPQALGPQYPGQTEGPPGPQQAMYASQQFSHHSSSMHPPQPSSTPTGSQ
PPPQHTAPSPGHGQPGQGGPQPQSMYHSGPLPAPTPPNMPPGHSSPQASYPMQGYSLPTH
QPMAQHYPGLGQLTQAHVAQGMSGPHHPGGHGPPQMMLHYAPPPQQGPGSAQQHGPPPQQ
GAHQHYYIQHPQAVQVQAHPTQQLSFHPPGN
NT seq 2976 nt   +upstreamnt  +downstreamnt
atgtcttttcgtcgacagaaccaacaacccggttcaggcggacgaaaaacctccaatgga
acggcagggcctgccgctttgccctctcatatcagcgggaacaataccaacagagctgtg
cctggaaggacaagaaatacaatgaagccgccatctcagtcctctcccgtatttgaaggt
gtttacaacaacaccaggatgcttcactatctcacagctgtagtgggctccacctgtgac
gtccgagtgaagagtggaaatgtgtatgagggcatcttcaaaaccctcagctcaaggtgt
gagctggtggttgatgctgtccacaagcggagcgaaggaggagaggcggatggaggcgga
gggggaggcttgcccccctccctgcccaggatagaggagatcacagacaccatgattttc
agccccggcgacctggtcacaatgacttgccgagatgtggacctcaactacgccatcaga
gatgctttcacagatacagcaatcggctcatcgcgggtgaacggggaacaccgggagaag
gtgctgcagaggtgggacggaggggacagcaacggagaaggcttcgacctggagacggac
acgtctaatggctgggatgctagcgaaatgttcaagtttaacgaggagacgtatggcgtc
acgtccacctacgattccagcctctccatgtacactgttcccctggaaaggggcagctcg
gatggcttccgacagcgggaggcgcgtgcggcccgcttagcgaatgagattgagggcagc
ccccagtaccgtcaccgcaccaacctggagaacgacgataagagtgaggaggacaagtac
agcgcagtggtccgagagagagacgaggggagggagaggggcagccctggattccagagc
agtgccgggagcagggagggtaaatacattcctcttccccagagggccagggagatgggt
gttccccccagcagcctgaggggcggagcctctggtccaatacccaatcgaacaggagtc
cccggctcctctagaccatcccagggttctgataggtgcagcccgctgtccatcaggggt
gcctactctccccaccagtcccaagccagccccccgggccagcccagtagccctaccccc
tcttctacctctcacccgatccctcactccatctctcacccacaagctctggccgatgcc
tcgcgctcttctgtcaacggagtgtcgtccagaacctctcccaaagcccagagatccgta
cagaccaatcgaactctgcgcaacccaagctcccagtcctcacctgcagtctctcgctct
ccaaaaccagacgacccagctctggctggcccttcctacctggacacttcctcctcctcg
atcgcctcggcaacacctaagtcctctggccccacccctctgttcactgtggatgtgaat
gagatcctaagctcagcggctaaggagaggacagaaggcccagccagccctcaagacagc
aagagcggcaaagttccctcagtcctgcagagaacacagttggaggagctacggaaattt
ggcaaagagttcaggctccagcccagcccctccccttctgctggccccacctcctcagaa
tccgcccagccctccccatcagactccgccaccacagccgagtccgtaaccgcccctggc
cacaccccctcccaggacccccagactggagaggggtcctccttcaccctgacccccacc
acccctactccctctctatcccccaacacctcctctcagtcatcaggtccagacagacag
gctacagggacaccccagccagccaggtcccctggcagcgaggaggagggcagcgagcga
gcagagggtgtggctgatcaggtgaagaagtctacgctgaaccccaacgccaaagagttc
gtcttcaaggcacccatgaccctggtgaagccgtccccagcccccacccccccgcggccc
actcctcccagcccctccgtggtgctccagccccccccgggacaacaggccatctacagc
accccctacctgtcctacctctcccccgtacagatacagggacactctgtgcaggctcct
cagatgtatcagtacaccatgtctacagtccagcaggggaagtatcccagatctaaaggc
caggtggtaggacctcgtccggaccaccacggctcttctcagccccagatgctccaggct
gcagcgtctgcagcaggccctcccctggtggcctccccctacccccaggcctacctgcag
tacagtcaggtcatccagggcatgccccactaccccggacagccggtgtactccatgctg
cagggtggggccaggatgctgactcaggcgggccacccccaggctctgggccctcagtac
cctggacagacagagggtcccccgggaccacaacaggccatgtatgcctcccagcagttc
tcccaccattctagctccatgcaccctccccagccctccagcacccctactgggagccag
ccccctccccagcacactgcccccagccctgggcacggacagccgggccagggaggcccc
cagccccagtccatgtaccactctgggcccctgccagcgcccacaccccctaacatgccc
cctggccacagctctccccaggcctcttaccccatgcagggctacagcctgcccacccac
cagcccatggcccaacactaccccggcctgggacagctcacacaggcccatgttgcccaa
ggtatgtctggcccccaccacccaggaggccacggcccgccccagatgatgctgcactat
gccccacccccacagcaaggcccaggctcagcccagcagcacggccctcccccccagcag
ggggcacaccaacactactacatccaacatccacaggctgtacaagtgcaggctcacccc
acccagcagctctccttccacccccctggaaactga

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