Salvelinus namaycush (lake trout): 120052737
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Entry
120052737 CDS
T07522
Name
(RefSeq) AP-2 complex subunit alpha-1-like isoform X1
KO
K11824
AP-2 complex subunit alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120052737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120052737
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120052737
Membrane trafficking [BR:
snh04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
120052737
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120052737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptin_C
Alpha_adaptinC2
Cnd1
RIX1
HEAT_2
HEAT_EF3_N
HEAT_GCN1
HEAT_MROH2B_1st
TOR1L1_N
DUF4003
AP4E_app_platf
IFRD
Motif
Other DBs
NCBI-GeneID:
120052737
NCBI-ProteinID:
XP_038855750
UniProt:
A0A8U0R620
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All DBs
Position
Sna8:complement(45648922..45701971)
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AA seq
962 aa
AA seq
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MPAVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVC
KLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDL
SSRNPTFMCLALHCIANVGSREMAEAFAGEIPRILVAGDTMDSVKQSAALCLLRLYKASP
DLVLMGEWTSRVVHLLNDQHMGVVTAAISLITCLSSKNPDEFKTCVSLAVSRLSRIVSSA
STDLQDYTYYFVPAPWLSCKLLRLLQCYPPPEDGAVKGRLVECLETILNKAQEPPKSKKV
QHSNAKNAILFEAISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSE
FSHEAVKTHIETVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVAEMLSYLETADYSI
REEMVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQGYAA
KTVFEALQAPACHENMVKVGGYILGEFGNLIAGDPRSSPLVQFNLLHSKFHLCSVPTRAL
LLSAYIKFINLFPETKATIQEVLRSDSQIRNSDVELQQRAVEYLKLSSIASTDVLATVLE
EMPPFPERESSILAKLKKKKGPGAVSVELEDGKERGELNGGGDRAGDAAIAASNASTPSP
SADLLGLRSAAPVSGATPSAGSLLVDVFSEAGPAATSAGVNDDGFLSSAPPTAASEDPAP
PLPESDELLNKFVCKNNGVLFENQLLQIGIKSEYRQNLGRMYLFYGNKTSVQFVSFNTTV
SCPGELQSQLNVQTKTVEPLVEGGAQVQQVINIECLTDFIDAPLLNIKFRYGGALQNISL
KLPVTINKFFQPTEMAAADFFQRWKQLSQPQQEAQKIFKASHGMDTEVLKAKLLGLGTAL
LENVDPNPENYVCAGVIQTKAQQVGCLLRLEPNAQAQMYRLTLRSSKDTVSQRVCDLLAE
QF
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgccggctgtgtcgaagggagatgggatgcgcggattagcggtgttcatttcggacata
cggaattgtaagagcaaggaggcagagatcaagcggatcaataaggagctggccaacatc
cgctccaaattcaagggggataaggcactggacggctatagtaagaagaagtatgtctgc
aagctgctcttcatcttcctgctgggacatgacattgactttggacacatggaggctgtc
aacctgctcagctccaacaagtacacagagaaacagatcggctacctgttcatctcggtg
ctggtaaacagcaacagcgagttgatccgcctcatcaacaacgccatcaagaacgacctg
tctagccgcaaccccaccttcatgtgcctggccctgcactgcatcgccaacgtgggtagc
cgcgagatggccgaggccttcgctggagagataccccgcattctggtggctggggacacc
atggacagtgtgaagcagtctgctgccctgtgtcttctgcgtctgtacaaggcctcccca
gacctggttctgatgggggagtggacctcccgggtggtgcacctcctcaacgaccagcac
atgggtgttgtcacggcagccatctccctcatcacctgtctcagctcgaagaacccagat
gagttcaaaacctgtgtgtccctggctgtttctcgtctgagcaggattgtgtcgtcagcc
tccactgacctgcaggactacacctactactttgtcccagccccgtggctgtcctgtaaa
ctgctgcgcctgttgcagtgctaccccccgccagaggatggcgccgtgaagggccgcctg
gtggagtgtctggagaccatcctgaacaaggcccaggaaccacccaagtccaaaaaggtg
cagcactccaacgccaagaacgccatcctgttcgaggctatctcactcatcatccactac
gacagtgagcccaacctgctggtgcgtgcctgtaaccagctaggtcagttcctgcagcac
agagagaccaatctgcgctacctggctctggagagcatgtgtaccctggccagctcggag
ttctcccatgaggccgtcaagacgcacatcgagaccgtcatcaacgcactcaagactgaa
agggatgtgagtgttcgccagagggctgctgacctgctctacgccatgtgtgaccgtagc
aacgccaagcagatcgttgccgagatgctcagctacctggagacagcagactactccatc
agagaggagatggtgttgaaggtggccatcctggcagaaaagtatgcggtggactactca
tggtatgttgacaccatccttaacctcatccgcattgccggggactacgtcagtgaggag
gtgtggtaccgagtcatccagattgtcatcaaccgtgacgacgtgcagggctacgccgcc
aagactgtctttgaggcgctgcaggccccagcctgtcatgagaacatggtgaaggtgggg
gggtacatcctgggagagtttggaaacctcatcgccggggacccccgctccagccctctg
gtccagttcaacctgctccactctaagttccacctgtgttcggtgcccacgcgcgccctg
ctgctctcggcctacatcaagttcatcaacctgttcccagagaccaaggccaccatccag
gaggtgcttcgctccgacagccagatcaggaactctgacgtggagctgcagcagagggcc
gtggagtacctcaagctctcctctattgccagcaccgacgtcctggccactgtgctggag
gagatgcctcccttcccagagagggagtcctccatcttggccaagctgaagaagaagaag
ggtccgggtgccgtgtcggtagagctggaggacggcaaggagagaggagagctcaacggt
ggaggggacagggcgggtgacgctgccatcgcagcctctaacgcttccaccccctcccct
tcagcggatctgcttggccttcgttcggccgctcctgttagtggggccactcccagtgca
ggcagcctattggttgatgtgttttcagaggcggggccagctgccacttctgctggcgtg
aacgacgacggcttcctgagctctgctccccctactgcggcctctgaggatcctgcccct
cctctgcccgagtcagacgagcttctcaacaaatttgtgtgtaagaacaacggtgtgttg
tttgagaaccagctgcttcagatcggcatcaagtctgagtaccgtcagaacctggggagg
atgtatctgttctatggcaataaaacctcggtgcagtttgtcagctttaacaccacagtc
agctgcccaggggagctgcagtctcagctcaacgtgcagaccaaaacagtggaaccccta
gtggagggaggagcacaggtgcagcaagtcatcaatatcgagtgtctgaccgacttcatt
gacgctccgctgctcaacatcaagttcaggtatgggggagccctgcagaacatctctctc
aagctgcctgtcaccatcaacaagttcttccaacccacagagatggccgccgcagacttc
ttccagcgctggaaacaactcagccagccccagcaagaagcacaaaagatcttcaaggcc
agtcatggcatggacacagaagtgctcaaggccaagttgctgggcctggggacagccttg
ttggagaatgtggatcctaacccagagaactatgtgtgtgctggagtcatccagaccaag
gcccaacaggtcggctgtctgctgagactggaacccaatgcgcaggcccagatgtaccgg
ctgactctgcgcagcagcaaggacaccgtttcccagcgcgtctgtgacctcctggcagaa
cagttctga
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