Salvelinus namaycush (lake trout): 120052821
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Entry
120052821 CDS
T07522
Name
(RefSeq) sodium/potassium/calcium exchanger 1-like
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
120052821
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snh02000
]
120052821
Transporters [BR:
snh02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
120052821
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Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
BUD22
DUF913
Fimbrillin_C
Motif
Other DBs
NCBI-GeneID:
120052821
NCBI-ProteinID:
XP_038855925
UniProt:
A0A8U0R606
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Position
Sna1:72487055..72528383
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AA seq
689 aa
AA seq
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MHLPQRRRLNRSRILFFLCGVLLCCVYTVTFKARLQEPWVARQAAAEEDPGTALPEEGGG
SDSSSVLEVDTREVVTSNPFSLTESYDDDVITRAPTVLEGDDVMVITVNRTDIKHCIYVE
DPEPEPPTEPPPTPPPPNTTTSPGIPGDVPHRKGEYPEDLFTVDQRRRGWVTLHILGMVY
MFVSLAIVCDEFFVPALGVITVKLDISDDVAGATFMAAGGSAPELFTSLIGVFISHSNVG
IGTIVGSAVFNILFVIGMCAIFSREMLHLTWWPLFRDVSFYIIDLIMLIVFFLDNTIMWW
ESVMLVSGYVAYVCFMKFNVQIEHFVKTQINKHKSIVKIIMPEEEEEKEPKKVDSPQKRD
REKLKVKPTLQRGGSNASLHNSTNRNTIFQLMIHTLDPLGEAGPEKTEQAEPSTSQTTPK
EEEKPGPSETQTDQGPAGAGGSDGSDSGEEDESEEESEDEEDEDDEDDDDDEENKEEEEG
EENEEPLSLEWPDTRRKQATYLFLLPIVFPLWLTVPDVRNPASRKYFAMTFIGSITWIAV
FSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSN
IFDITMGLPVPWLIFSAMQGGVPVAVNSNGLFCAIVLLFVMLLFVIVSIAACRWKMSRVL
GLTMFMLYFVFLVLSVMLEDRVIICPVSI
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaccacaaagacggagactcaaccggagtcgcatcctcttcttcctctgtggt
gtattactgtgctgcgtctacaccgtgacgttcaaggcccggctgcaggagccatgggtg
gcccgccaggccgcagcagaggaggatcctgggacagcactcccagaggaagggggcggt
agtgatagtagtagtgttctggaggtagacacacgagaggtggtgacctctaaccccttt
agcctaacagagagctatgatgatgacgtcatcaccagggctcctactgtgctggagggg
gatgacgtcatggtgataactgtcaacaggacggacattaagcactgtatctacgtagag
gaccctgaacccgagcctccgactgaacctcctcccaccccccctcctcctaacaccacc
acctccccgggtatccctggagacgtcccccacaggaagggagagtacccagaggacctg
ttcacggtggaccagaggaggcggggctgggtgaccctccacattctgggcatggtctac
atgttcgtctccctcgccatcgtctgtgacgagttcttcgtcccggcgctcggcgtcatc
accgtgaagctcgacatctccgacgacgttgccggggcgaccttcatggctgcaggaggc
tccgcacccgaactgttcacctctctgattggcgtgttcatctcccatagcaacgtgggc
atcgggacaatcgtggggtcggcggtgtttaacatcctgtttgtcatcgggatgtgtgcc
atcttctccagggagatgctccacctcacctggtggcccctgttcagagacgtctccttc
tacatcatagatctgatcatgctgatcgtgttcttcttggacaacaccatcatgtggtgg
gagagcgtaatgctggtgtcgggttacgtggcctacgtctgcttcatgaagttcaacgtg
cagatcgaacacttcgtcaagacgcagatcaacaaacacaagagcatcgtgaagatcatc
atgccagaggaggaggaggagaaggaacccaagaaggttgactcaccccagaagagagac
agagaaaaactgaaggtgaagcccactctccagagaggagggagtaatgcgtctctccac
aacagcaccaacagaaacaccatcttccagctgatgatccacacactggacccgctggga
gaagctggacctgagaagactgagcaggccgaaccctcgacctcccagaccacacctaaa
gaagaggagaaaccaggcccgtcagagacacagacggaccagggcccagcgggcgcaggg
ggatccgacggctcagacagcggtgaggaggacgagagcgaagaagagagcgaggatgag
gaagatgaggatgatgaagacgatgatgatgatgaggaaaataaagaagaggaagagggt
gaagagaatgaggaacctctgtcgttagaatggccagacaccagacgtaaacaggccaca
tatctgtttctcctaccgatagtgttccctctgtggctcactgtgcccgacgtacgcaac
ccggcttccagaaaatactttgccatgacgtttattggttccatcacgtggatcgctgtg
ttctcctatctaatggtctggtgggcacatcaggtgggggagaccataggcatctcagag
gagatcatgggcctgaccatcctggcagcaggcacctccatccctgacctcatcactagt
gtcatcgtggcccgtaaaggactgggagacatggctgtgtccagctcagtgggatccaac
atcttcgatatcactatgggcctgcccgtcccatggttgatcttctcggcgatgcaaggc
ggtgtaccggtggcggtgaactccaacggtctgttctgtgccatcgtgctcctcttcgtc
atgctcctcttcgtcatcgtcagcatcgcggcgtgtcggtggaagatgagccgtgttctg
ggcctcaccatgttcatgctttacttcgtgttcctggtgctcagtgtgatgctggaggac
cgtgttattatctgccccgtctccatctga
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