Salvelinus namaycush (lake trout): 120052836
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Entry
120052836 CDS
T07522
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120052836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120052836
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120052836
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
HECT type E3
120052836
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
120052836
NCBI-ProteinID:
XP_038855946
UniProt:
A0A8U0ULF4
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Position
Sna8:54624461..54633373
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AA seq
1013 aa
AA seq
DB search
MISWGEDSRNGFGLVKPNGLDTTKTDISCVNLIHLKSKIQGLSAGNSVVAFIRNNGRLVS
VARIQEDQDGRRITGKLKSVTCKETIRALSCGDSHAVLLSEEGRVLCLDKANILRPLDNL
CKRQVTQVACGDQHSISLTQDGQVFTWGQNTSGQLGLGWGESSAMSPKPLKSLSGIPLVQ
ITAGGDHSFALSLSGAVFAWGKNTAGQLGLGDTTNRHAPAPVDCLNLKKTVLISCGGEHT
AVLTKGGVVFTFGSGRYGQLGHNSLRDELQPRVVGQLWGSKVTQIACGRHHTLAFVGPSN
KIYSFGHGEQGQLGNGVKIDQSVPLPVQLPDQIDERKIEQIFAGGNHSFALCTHGQESEE
RSNNLRSSVGKVTQQAIDEEIIDKWISECDSKSWKKGQKEITKMFSSASCLNGSFLDKSC
DKHYQTSPKQSGLDLSLVRGAFRKLAKKDKVLTEVEAVVQHTLLPSLYEEPIGVEGLRVY
LVLPELLRVLHKQHRRTDLTEAVAAAILRLHPDKLQVLGDCWSSLKPSVMTKHIGVWKKA
LSGILRSGHILRTRDPGIKHLLQVLGHLHRANQKSVETQTVPDSTFCMEEVHFNPIFLEE
DVKFWRSWSKQDVDQTPAIFCHYPFLMNLQSKINVFNINAALTQNPPNNRQRTGMWPFDM
FLMAAPAPFFELRLNRASLIKDTFHQLSVACPSTFKRFLVVYFDEDAKLTNVYKRDFFLH
LFDKLLVPESGMFMYNDTETLAWFPAMPRVEEKRYFLFGVLCGMALYNNNMVHLPFPMAF
FKKLVNIKPSLEDLREFSPIEAKSLQYILDYPDDDVENMDMTFSVMWGDVAVELDPKETG
KLVTSANKKEFVDTYVNYIFNQSVEVVFEEFRKGFFKVCDKDVVEFFQPEELRGVMVGKE
IFDWETLKQNTVYEGEYHAGHPNIVTFWEVFEDLTEDQKKAFLLFLTGCDRVPILGMNQI
RMRVKTLPNSSQQHFPEALTCHSLLQLPIYPSKETLQSRLIEAVGHNRGFWNE
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgatttcatggggagaggatagtcgtaatggctttggtttagtgaagccgaatggttta
gatacgaccaaaacggatattagttgcgttaatttgatacaccttaaatctaaaattcag
ggtctgtccgcaggtaacagtgtggtcgcgtttatcagaaataatgggagactagtgtct
gtcgcacggattcaagaggaccaagatgggagaagaatcacagggaaactgaagagtgtg
acgtgtaaggagacgattcgcgctctgagttgtggagattctcatgctgttttactgtct
gaagagggccgggttctttgcttggacaaagccaatattctcagaccattggataaccta
tgtaagcgacaggtaactcaggttgcatgtggagaccagcattcaatttcactaacacag
gatggtcaggtgttcacatggggtcagaacaccagcggccagctgggtttggggtggggc
gagtccagcgccatgtcccccaagcccctgaagtctctatcagggatccccctggttcag
atcactgcagggggagaccacagcttcgctctgtccctttctggagctgtgttcgcctgg
ggcaagaacaccgccgggcagctgggactaggggacacaacaaacagacatgccccagct
cctgttgattgcctgaatctgaagaagactgttttgatttcatgtggaggagaacatact
gccgttctgacaaagggaggtgtggtgttcacatttggctcaggccgctatggacagctt
ggacacaactctctccgagatgaactacaacctcgagtggtagggcaactctgggggtca
aaggtgacccagatagcctgtggaagacaccacacattagcatttgtggggccctcaaat
aagatctactcatttgggcacggagagcaagggcagctgggaaatggagtaaagattgat
cagtctgtgccccttccagtacaactgccagaccagattgatgaacggaaaattgaacag
atttttgctggaggaaaccattcctttgcattgtgcactcatggtcaggagtctgaagaa
aggtctaacaatctcaggtcaagtgtgggcaaagtgacacaacaagctatagatgaagaa
atcattgacaaatggatctcggaatgtgattcaaagtcttggaaaaaaggacagaaggaa
atcacaaaaatgttttcttctgcatcatgtttaaatgggagctttcttgataaaagttgt
gacaaacattaccaaacctcaccaaaacagtctggcctggatttgtcactcgtccgaggc
gcattccggaagctggcgaaaaaggacaaagttttgactgaggttgaagctgttgtccag
cacacactgcttccctccctgtatgaggagcccattggagtggagggcttgagggtctac
ctggttctccccgagctcctcagggtccttcacaaacagcacagaaggacagatctcacc
gaagccgttgctgctgctatcctcagactgcaccccgacaagctgcaggtcctcggtgac
tgctggtcctcattgaagccatctgtcatgaccaagcacattggggtgtggaagaaggcc
ctgtcggggattctgaggagtggacatattctacgcactcgtgaccctgggatcaaacac
ctgctccaggtcctcggccatctccacagagcaaaccagaaatctgtagagacccagaca
gttccagacagtaccttttgtatggaggaggttcacttcaatcccatatttctagaggag
gatgtaaagttttggcgttcatggtcaaagcaggatgtggatcagacacctgccatcttt
tgtcattacccattcttgatgaatctgcagagcaagataaacgtttttaacatcaacgcc
gcactcacacagaatccacctaacaatcgccaaaggactggcatgtggccttttgacatg
ttcctcatggcggcgcctgctccgttctttgagctgaggctgaatagagcatcactcatc
aaagacactttccatcaactgagtgtagcatgtcccagtaccttcaagaggttccttgtg
gtgtattttgacgaggatgcgaagctgacaaatgtctacaaaagggacttcttcctccat
ttgtttgataagctgttggtccctgagtctgggatgttcatgtacaacgacaccgagacg
ctggcctggttccctgcaatgcctagagtggaggagaagcgttatttcctgtttggggtt
ctgtgtgggatggccctatacaacaacaacatggtgcacctccccttccccatggccttc
ttcaagaagctggtgaacatcaagccctctttagaggacctgagagagtttagccccatt
gaagcaaagagtttgcagtacatcttggattaccctgatgatgatgttgaaaacatggac
atgactttctcagtgatgtggggtgatgtagcggtggaacttgatcccaaagaaactgga
aaacttgtcacaagtgctaataagaaggagtttgttgacacctatgtgaactacatcttc
aaccagtcagtagaggtggtgtttgaagagttcaggaaaggcttcttcaaggtgtgtgac
aaggacgtggtggagttcttccagccagaggaactgaggggagtgatggtggggaaggag
attttcgactgggagacgctgaaacagaacactgtgtatgaaggagagtaccatgctggg
catcccaacatcgtcacattctgggaggtgtttgaggacctgacagaggatcaaaagaaa
gcattcctgttgttcctgactggctgtgatcgtgtgcccatcctgggtatgaaccagatc
aggatgagggtcaaaacccttcccaactcctcccaacagcatttcccagaggcgctgacc
tgtcactctctgttgcagctgcccatctacccctccaaagagacactacagagcaggctt
atagaggctgttggccacaacagaggcttctggaatgaataa
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