Salvelinus namaycush (lake trout): 120052888
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Entry
120052888 CDS
T07522
Name
(RefSeq) FACT complex subunit SSRP1-like isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120052888
03036 Chromosome and associated proteins [BR:
snh03036
]
120052888
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
120052888
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
120052888
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
HMG_box
POB3_N
SSRP1_C
HMG_box_2
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
120052888
NCBI-ProteinID:
XP_038856013
UniProt:
A0A8U0R6Z3
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Position
Sna8:57178922..57201637
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AA seq
725 aa
AA seq
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MGDTLEFSDIYQEVKGSWNDGRLRFGRQSVVYKSSKTGKVDSIPAAELSQAQWRRVCLGQ
GIKLTTSTGHIYKYDGFRDTVTRGMGGRERDEGRDEGRGEDFEKISEYFKAHYKVELSEK
ELCVKGWNWGTTKFSGPLLSFEVNDSPAFEIPLASVSQCATGKNEVTLEFHQNDEAEVSL
MEVRFYVPPGDTATTEEGPEPVEVFRDSVLSKADVIQATGDAVCIFKELQCLTPRGRYDI
RIYPSFLHLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFMISLDPPIKQGQTRYHFLILL
FSKEEDLSLSLNMTEEEVEKRYGGKLSKNMSGSLYEMVGRVMKALVNRKITVPGNFLGHS
GTQCITCSYKASSGLLYPLERGFVYIHKPPVHLRFEEVSCVNFARGTTTTRSFDFEIETK
QGTQFTFSSIEREEYGKLFDFVTAKKLSIKNRGFKEGLKGKDDMLEDSDEDQHDAYLERM
KEEGKIREEANDSDDSDGESDESFDPGEEEDDIAEEYDSKASASDSSAEGGDSDREKKKR
PAKKAKVVKERKPRKKKPKDSGAPKRPMSAYFLWLNASRESIKAEHPGISITEISKRAGE
MWRELGKEQKVEWDGKAEEAKKDYEVAMREYRESGGGSSAPSKKERKKKGGKSDEKNKKG
ASGGGRERERERTTGNDSFKSREFISSEESSSESDRGKGKRKRKGSDEKEEEVASTPPSS
DSGSD
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatacactggagttcagtgacatttaccaggaggtcaaagggtcatggaatgac
ggccgcctgcggttcggtagacagagtgtggtgtataagagcagtaagacagggaaggtg
gacagcatcccagctgcggagctgtctcaggcccagtggagacgtgtgtgtctgggacag
ggcatcaagctgaccaccagcaccgggcacatctacaaatatgacggcttcagagacacg
gtgacgagagggatgggaggaagagagagggatgaggggagagatgagggtagaggagag
gactttgagaaaatctctgagtacttcaaagcccactacaaagtggagctgtcagagaag
gaattgtgtgtgaagggttggaactggggcaccaccaaattctctggccctctcctgtca
ttcgaggtgaacgacagcccagcgtttgagatccccctggccagcgtgtcccagtgcgcc
acggggaagaacgaggtgacactggagttccaccagaacgatgaggcagaggtgtcgctg
atggaggtccgcttctacgtcccgcccggggacactgccaccacggaagaggggccagaa
cccgtggaggtgtttagagacagtgttctgtccaaggcagatgtgatccaggctacagga
gatgctgtgtgtatcttcaaagagctacagtgtctcacgcccaggggcaggtatgatatc
cgtatctaccctagcttcctccacctccatggtaagacatttgactacaagatcccctac
accactgtgctacgtctcttcctgctaccacacaaggaccagagacagatgttcttcatg
atcagtctagacccgcccattaaacaggggcagacacgttaccacttcctcatcctgctc
ttctccaaggaggaggacctcagcctctccctcaacatgacagaggaggaggtggagaag
cgttatggggggaagctcagtaagaacatgtcaggttctctctacgagatggtcggcagg
gtgatgaaggctctggtcaacaggaagatcaccgtgccaggaaacttcctgggtcactcg
ggcacccagtgtataacgtgttcctacaaagcgtcgtcaggcctgctctaccctctggag
aggggtttcgtctacatacacaagccccccgtacacctgcgcttcgaggaggtgtcgtgt
gtgaacttcgccagaggcaccaccaccacgcgctccttcgactttgagatcgaaaccaag
cagggcacccagttcaccttcagcagcattgagagagaggagtatgggaagctttttgac
tttgtgaccgccaagaagctcagcatcaagaacagaggattcaaagagggtttaaagggt
aaagatgacatgttggaggactcagacgaggaccagcacgatgcctacctggagaggatg
aaagaggagggcaagatcagagaggaggccaatgacagcgatgactccgatggagagagc
gatgagtcttttgaccctggagaggaggaagatgacatagcggaagagtatgacagtaag
gcatcagccagtgacagcagtgcagaggggggagacagtgacagagagaagaagaagaga
ccagccaagaaggccaaagtagtgaaggagaggaaaccacgcaagaagaagccgaaggac
agtggcgcccccaagaggccgatgagcgcctatttcctgtggctgaacgcgagccgcgag
agcatcaaagcagagcaccctgggatatccatcacagagatctccaagagggccggggag
atgtggagggaactggggaaggagcaaaaagtggagtgggatgggaaagcggaggaggcg
aagaaggactatgaggtagcgatgagggagtacagagagagtggaggaggatcctctgcc
ccctccaaaaaggagaggaaaaagaagggagggaagagtgatgagaagaataagaagggg
gcgtctggtggagggagggagcgagagagggagaggacgacaggaaacgacagctttaag
agcagggagtttatctccagcgaagagagctcctcagagtcagacagaggcaagggcaaa
cgcaaacgcaagggttcagatgaaaaagaggaggaggtggcctcgaccccacccagttcc
gactcaggatcagactga
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