Salvelinus namaycush (lake trout): 120052906 Help Entry 120052906         CDS       T07522                                  Name (RefSeq) aggrecan core protein-like   KO K06792   aggrecan 1 Organism snh  Salvelinus namaycush (lake trout) Brite KEGG Orthology (KO) [BR:snh00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:snh00535]     120052906    00536 Glycosaminoglycan binding proteins [BR:snh00536]     120052906    04091 Lectins [BR:snh04091]     120052906 Proteoglycans [BR:snh00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    120052906 Glycosaminoglycan binding proteins [BR:snh00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    120052906 Lectins [BR:snh04091]  C-Type lectins   Lecticans    120052906 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Xlink Lectin_C Sushi EGF V-set hEGF EGF_TEN I-set ig Motif Other DBs NCBI-GeneID:  120052906 NCBI-ProteinID:  XP_038856053 UniProt:  A0A8U1BJI5 LinkDB All DBs Position Sna1:74330374..74350321 Genome browser AA seq 1552 aa AA seqDB search VSISLPSSPPDPEDTLSVSVPLELPQRPLLGSTLVLPCYFQDHTVHDPGAPTIAPLSHRI KWSRVTKERVSVILVAMDGEVKVEEDYLDRVHMVGYPQTPTDASIKITELRSNDTGTYRC EVQHGIEDNHDTVDVLVQGIVFHYRAITTRYTLTFEKAKAACIQNSAVIATPEQLQAAYD DGFHQCDAGWLSDQTVRYPIHDPRENCYGDKDEFPGVRTYGVRDVNETYDVYCFAEKMTG SVFYSASVAKFTYSEAEEQCSKQGALLATTGQLYLAWQAGLDVCNAGWLGDRSVRYPINV RRPQCGGGLLGVRTVYLHVNQTGYPLPESRYDAYCYTETDEEGSGMVVPTEAGSGVLSVA TVTQGPPELFYRNMTTESEALGEDLATQKPTSVDFTFGTELPLPQSPSVTELPLPQPPSV TELPQPPSVTELPQPPSVTELPQPPSVTELPQLPSVTELPLPQPPSVTELPLPQPPSVTE LPLPQPPSVTELPLPQPPSVTELPLPQPPSVTELLLPQPPGVTELLLPQPPSVRELVVDV VGRVTARPDVWSVVFHYRAGSSRYAFTFVEAQLACQSVGASIATPEQLQAAYEAGYNQCD AGWLLDQTVRYPIVSPLEKCPGDLETLPGVRSYGLRPADEHYDVYCYVDRLRGDVFHAGS SEGFTYDGALAHCQELNATLASTGQLYAAWRQGLDKCRAGWLIDRSVRYPITNPRVACGA GKAGVYTVYTHNNQTGFPDLYSRYDAYCFKVDILLLANETGLNITEIEESLVNLTSITDL LRPVLPSITPPISVESSGSAEIPSGSSGLSSEDPSGSGLSGDGSGITVTFSSGSGSVLSG LGSGGPQEAGEGITGILTFPSEMGLGMFSGSEFLSGWGSGSGVSSEESGSSSDSSSSSGE SGGWSGMSSGSSSSSSEEFSGFPSGFFPSGGSSGHSGEESGSGDTQVLLIDGKLMEVSTS HTHKEKELGGGGLEFSGSASGSSGSGFFPDVTFLGSGFTDLTGSASGEQEASGSLHYGSG SGDISGSASGSSGSGFFPSVNFFGSGFTDLTGSASGEQEASGSLHYGSGSGDISGSASGS SGSGFFPGVTFLGSGFTDLTGSASGEQEASGSLHYGYGAGRGGYASGFGTSGFPSGDMSG ISRSSTSDEEDSAVTFLTNDFMTEVSKATTVSMELGAGPVQFSGQGSGSHTGNGADHPTQ ASGVSSGAHSGDLLPVVLSSPPSNRELMEGTEGPEEAMAGGAELGETTSEFYMTFAPNLA PAGLAAPAISLQTPAVMEEPSSEEGIPNPCDPNPCGAGSCSVEDGVGLCQCPPGKVGEGC QYEVDVCHSNPCANGATCVENADSYKCLCLPSYGGDRCEIDEQDCEEGWTKFQGNCYLHF PERETWLDAEQRCRDLSAHLVSIITPEEQHFVNSNGQDYQWIGLNDKTVENDFRWIDGTP LQFENWRPNQPDNYFNSGEDCVVMIWHENGQWNDVPCNYHLPFTCKTGPVYCGAPPEVEN AKMFGSRREQYTVGSIIRYQCNPGLLQRHLPVVRCMADGQWEKPQVECMGGE NT seq 4659 nt NT seq  +upstreamnt  +downstreamnt gtgtccatctctctgccctcttcccctccagaccctgaggacacactgagtgtgagcgtc ccactggagctgcctcagcgccctctactgggcagcaccttggtactaccctgctacttc caggatcacaccgtccacgaccccggcgcccccaccattgcccccctgtcccaccgcatc aaatggagccgcgtcactaaggagcgtgtctctgtcatcctggtggccatggacggagag gtcaaggtggaggaggactatctggaccgggtccacatggtgggctacccccagaccccc actgacgccagcatcaagatcacagagttgaggtccaacgacaccggcacctaccgatgt gaggtccagcacggcatcgaggacaaccatgacactgtggacgtcctggttcaaggtatc gtgtttcactaccgggccatcacgacacgctacactctgacctttgagaaggccaaggca gcctgtatccagaacagtgctgtgatcgcgaccccagagcagctccaggccgcgtatgat gacggcttccaccagtgtgacgccggctggctctccgaccagactgtcaggtacccaatc catgatccacgtgagaattgttatggcgacaaagacgagttccccggggtgcgaacttac ggagtgagagatgtcaacgagacttacgacgtgtactgttttgccgagaagatgacaggc agtgtgttctactctgcctctgtggctaagttcacctactctgaggctgaggaacagtgt agtaagcagggggccctgttggccaccacaggacagctgtacctggcctggcaggctggt ctggatgtgtgcaatgcaggctggctaggagacaggagcgtccgctaccccatcaatgtc cggaggccgcagtgtggagggggtctgctgggggtacggaccgtgtacctccacgtcaac cagacggggtaccccctccccgaatcccgctacgatgcctactgctacacagaaacggac gaggagggctcaggcatggtggtgcccaccgaggcgggcagcggcgtgctgagcgttgcc acggtgacccagggtcctcccgagttgttctacaggaacatgaccacagagagcgaggcg ctgggtgaggacctggccacccagaaacccactagcgtggacttcacctttggcactgag ttgcccctgccacagtcgcccagtgtcaccgagctgcccctgccacagccgcccagtgtc accgagctgccacagccgcccagtgtcaccgagctgccacagccgcccagtgtcaccgag ctgccacagccgcccagtgtcaccgagctgccacagctgcccagtgtcaccgagctgcct ctgccacagccgcccagtgtcaccgagctgcctctgccacagccgcccagtgtcaccgag ctgcccctaccacagccgcccagtgtcaccgagctgcctctgccacagccgcccagtgtc accgagctgcctctgccacagccgcccagtgtcaccgagctgctcctgccacagccgccc ggtgtcaccgagctgctcctaccacagccgcccagtgtgagagagttggttgtggatgtg gtggggagagtaacggccaggccggatgtgtggagcgtggtgttccactaccgtgctgga tctagccgctacgccttcaccttcgtggaggcccagctggcctgtcagagtgttggagcc tccatcgccaccccagagcagctccaggctgcctacgaagccggctacaaccagtgtgat gcaggctggcttctggatcagaccgtcaggtatcccatcgtgtctcctctggaaaagtgc cctggggatctggagactttaccaggagtgaggtcctatggactgaggcccgctgacgaa cactacgatgtgtactgctacgtggacagactcaggggtgatgtgttccatgctggctcc agtgagggcttcacctatgacggtgctctggctcactgtcaggagctgaacgctaccctg gcctctactggacagctctacgccgcctggagacaaggcttggataagtgccgcgcaggt tggctaatcgaccggagtgtccggtaccccatcaccaacccccgggtggcgtgtggtgca gggaaggcaggggtgtacacagtatacacccacaacaaccagacgggattcccagacttg tattccagatatgacgcctactgcttcaaagtggacatcttgcttcttgccaatgaaact ggattgaacatcacagagatagaagagtctttggttaacctcacatccatcactgatttg ctgaggcctgtcctgccttccatcactcctcccatctctgtggagtcctcaggctctgca gagattcccagcggatcgtctggtctgagtagtgaagatccgtccggctcggggctgagt ggagacggatcgggaataacggtcaccttctcttcagggagtggcagtgttttatctggt ttgggctctgggggtcctcaggaggctggagagggaatcactgggatcctcaccttcccc tcagaaatgggattgggaatgttcagtggcagtgagttcctgtcgggatggggaagtggc tccggtgtcagttctgaggagagcggctcttcgtctgacagctccagcagctctggggaa agtggggggtggtctggaatgtcgtccggctccagctctagttccagtgaggagttttcc ggatttccctcaggattctttccctcaggaggctccagtggtcattcgggagaggagtcg ggaagcggagacactcaggtcctgctgatcgatgggaaactgatggaggtttccacctct cacacacacaaagagaaggagctgggtggagggggcctggaattcagcggttcggcctca ggcagcagcggctcagggttcttccctgatgtgaccttcttggggtcagggtttaccgac ctcacggggtcagcctcaggggaacaggaggcctcggggtctctccactacggctccgga agcggtgatatcagcggttcggcctcaggcagcagtggctcagggttcttcccgagtgtg aacttctttgggtcagggtttactgacctcacggggtcagcctcaggggaacaggaggcc tcggggtctctccactacggctccggaagtggtgatatcagcggttcggcctcaggcagc agtggctcagggttcttcccgggtgtgaccttcttggggtcagggtttaccgacctcaca gggtcagcctcaggggaacaggaggcctcggggtctctccactacggatacggagcggga agaggtggatacgcatcagggttcggaacgtcgggcttcccatccggggacatgtctgga atctccagatcctccaccagcgatgaggaggacagcgctgtcaccttcctgactaatgac ttcatgacagaggtttccaaggcgaccacggtttccatggagctgggggctgggccagtg cagttcagtgggcagggaagcgggtcccacacagggaacggtgctgaccacccaacccag gccagcggtgtctcatctggggcacactctggagatctgctccctgtggtgctgtcctct ccgcccagcaacagggagcttatggagggcacagaggggccagaggaggccatggctggc ggggctgagctgggggagaccaccagcgagttttacatgacctttgcccccaaccttgct cccgccggattggctgccccagccatctccctgcagacccctgccgtcatggaggagcca tcctcagaggagggtatccctaacccatgtgaccctaacccgtgtggtgctgggtcatgc tcagtggaggatggtgttgggctgtgccagtgtccgcccgggaaagtgggagaagggtgc cagtatgaggttgatgtgtgccattccaacccttgtgccaatggagccacctgtgtggaa aatgcagactcttacaaatgcttatgcctgcccagctacggaggggaccgctgcgagatt gacgagcaggattgtgaggaggggtggactaagtttcagggcaactgttacctgcacttc cccgagagagagacctggctggacgccgagcagcgctgccgagacctcagcgctcacctg gtcagcatcatcaccccagaggaacagcactttgtcaactccaacggccaggactaccag tggattgggctcaatgacaagacagtggagaatgacttccgctggatagacggcacacca ctgcaatttgagaactggcggccgaaccagccggataactactttaactctggagaagac tgtgtggtgatgatctggcacgagaacggccaatggaacgacgttccctgcaactaccac ctgcccttcacctgcaagactggcccagtctactgtggcgcaccgccagaggtggagaat gccaagatgttcggcagcaggcgggagcagtatactgtggggtccatcatccgctaccag tgtaacccaggcctcctacagcgccacctgcctgtggtgcgctgcatggcagacggacag tgggagaagccacaggtggaatgtatgggcggtgagtag

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