Salvelinus namaycush (lake trout): 120052951 Help Entry 120052951         CDS       T07522                                  Name (RefSeq) dmX-like protein 2   KO K24155   rabconnectin-3a Organism snh  Salvelinus namaycush (lake trout) Pathway snh04142   Lysosome Brite KEGG Orthology (KO) [BR:snh00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     120052951  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:snh04131]     120052951 Membrane trafficking [BR:snh04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     120052951  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     120052951    RAVE complex     120052951 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_WDHD1_1st Beta-prop_IFT140_1st WDR55 Beta-prop_EML_2 Beta-prop_WDR3_2nd EIF3I WD40_Gbeta Beta-prop_EML Beta-prop_HPS5 Beta-prop_DCAF12 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_LRRK2 Beta-prop_VPS8 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_SCAP Motif Other DBs NCBI-GeneID:  120052951 NCBI-ProteinID:  XP_038856125 UniProt:  A0A8U1EMB4 LinkDB All DBs Position 1:complement(74791665..74880399) Genome browser AA seq 3008 aa AA seqDB search MTLCATFCTQDPSLQRPVRSPGNGFICTVSPTLSSGLQESVTDTQQSSVTLILPPSKTGH TDMFRVEYRPVRTDLFFPYEEKWRTWRPEIVEKSDDCLLKVWYPTTGWRSAVVLPDLPDK KGPQVHFSFIYLAHPRSVTGLSWRKTSKYMAKGSVCNVLLTSCEDGVCRLWSETVLPEDS ILGGQITENTYSSSLPGLGGKDKIQHALESMSHLKHLRRGRRRSSALVSHTELLPSQMGT HETHTHRHISHHANALCHFHISASINPASDIPAVLAESAVFTPEDGSGGGGFVVHWLNNK DLSFTTSMDLFMLQLRKLSEQQLDQASDDALDQNGSPIKFDFDLDEMSEKGSSEHGEEGD GGEGSTKASSPGSSSSVPLPSMLLERKMEALTLEWNKSPDMLFTIHPSDGSFLVWHIKYL DEYIQGIFRQVQVSFSSRIPVAFPTGDANSLSKNILMYACSFSNVDSSNAVGEQGKRARR LPRSASAGLGSSALSLSLGQAPGIGPAVMMVSKHVDGSLNQWAVTFAERSAFSNVLTVSH TFRYCGHRFHLNDQACHTVLPLLLTSSHHNALLTPPSAPGSIDLDQPPTHTPPPRGRRRK QLRNAATRTFHDPNAIYSELILWRVDHIGPLSCTGGVSELARINSLHTSAFSNVAWLPTL VPSSVLGTYCNSSSACFVASDGKNLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQQ STARPGCIIELDVITNQCGSTTQLLHVFQEDFILGYKPQEDPELYTTSYPYTEEYHPTPF SEKFFLVVIEKDLNMNSVLQMWHLHLQSVQACVDDPVTERSYQSQLTIPLQQSTADTSSS PLTRSASTANLQSASKLILSSKLVCSHRLDLPVGVEVTRATPSAGHLSSSSIYPVCLAPY LIVTTCSDSRVRFWRCSVEGGETALGCEEGENRVYHWEPWALLNEEEDNNSAVCVPGRPV AVSCSYTGRLAVSFKQPRPGHIPGQSHGPAGDFSMHVSIFECESTGGSEWVLEQTLHLDD FTRPSSTLDPGVSVDSNLFVYSRSDLYMSRDHHSPNIKHYVHLDWLSKEDGSHILTVGVG SNILMYGRISGVVNEQTASKDGVAIITLPLGGSIKQGIRSRWILLRTVDLLSSVDGTPSL PVSLSWVRDGILVVGMDCEMHVYAQWRQDRKPGDAEGDSLSSEDNIPGGVGGSGGQTATA AATGGSSSAFKGRARSKSVFEGNVAIDEALQAPAGLQEGGLFEAAHSLSPTLPQYHPTQL LELMDLGKVRRAKAILSHLVKCIAGEVAVVRDVEAGEGGTRRHLSRTISVSGSTAKDTIV AGRDGGRDYTEINSIPPLPLYALLSADLDTSYKGGEEGAKGGKVAEVEGARKTGGDQYTD LFQLQAVTTDDFVSFATEKVEKKSRFINLSQYGPTYFGPEHAQVLSSQLMHSSLPGLTRL EQMFLVALADTVATTSSEVSSSTDKQYTGGEALDECGLRYLLAMRLHTCLLTSLPPLYRM QLLHQGLSTCHFAWAFHSEAEEEMLNMIPAMQRGDPQWSELRAVGVGWWIRNINTLRRMV EKVGKAAFQRNNDPLDAALFYLATKKKAVLWGLFRSQRDEKMTVFFKNNFSEDRWRKAAL KNAFSLLGKQRFEQAAAFFLLAGSLKDAVEVCLEKMEDIQLAMVVARLYEADYESSSTCQ AILYEKVLGCQRNGSRYHCTKLHPDPFLRSIAFWIMKDYTKALGTLLECIPKEDDENPDV MVKSCNPVVFSFYNYLRTHPLIIRRHYASPEGAVTSLGLTSEKSSVDEINLIERKLFFTT ANAHFKVGCPVLALEVLSKIPKVTKKSVSSSPLSKGSSMANVSSSLPLENGNQGALDWAS PAPVKANPAWGTEESSATLDWSQPLVKVEDDGLQLDWGDDKNDDEADGGLTMKKTDVETK ADEGSGGVRPPGLQREDSQGESEVDVIAEQLKFRACLKILMTELRTLATGYEVDGGKLRF QLYSWLEKEIGAMHRICNYKVAGKEESQELERWEDGGGVEDVFEESLGGGGGTEAGAYER HQLGRRRLAAKQLHAERRKAWLRKNQALLRVFLSYCSLHGAKGGGVTSVRMELIFLLQES QQETTVKQLQSPLPLPTTLPLLSASIATTKTVISNPVLHLSNHIHDILHTITQMELPPHP ELMDDRVNLLHTLAASLSACIYQALCDSHSYSSQAEANQFTGMVYQGLLLSERRRLRTES IEEHTTPTSAPAQWPGVSSLIALLQSAQGEDQPKLNVLLCEAVVAVYLSLLIHGLGMHAG NELFRLAAHPLSNKMWAAVFGGGAKIIIKPKRNAEITPAAAGKARTDSSSSVTSEPDSWT KAKPAVPAPPLAEDVDRLRRRFNMRMLVPGRPVKEVPATPPPVPAERPAYREKFIPPELS MWDYFVAKPFLPLSDSGALYDSDESGEEDDDDDDDDAFLSDTQMTEHSDPNSYSWSLIRL VMVKLALHNVKTFLPLTGLDFTDLPVTSPLGNAVLKTLENWETILQERMNKFDGPPPNYI NTYPTDLSTGGGPAILRHKAMLEPDNTPFKNKNHISFPARRLWHYLVKQEVLQETLIRYI FTKKRKQSECVEGYMDLLSPNCVSGALRSNKVEGDLGYPGRNAKIIHKESDIIMAFAINR ANTNEIVLASTHDVQEVDVSTLLAAQPYTWIGEDFDKESHSSDDVDYRSSHTNVAQASST PSHFNPKDMAASASMPWLGSGQTSMGASVIMKRNLNNVKRMTSHPIFQYYMTGAQDGSVR MFEWNRPQQLICFRQAGNARVTRLYFNSQGNKCGVSDGEGFLSLWQVNQTSSNPKPYVSW QCHSKTCGDFAFITSSSLIATAGQSNDSRNVCLWDTLISPSNAMVHAFLCHESGATVVQY APKQQLLISGGRKGFVCVFDIRQRQLLHTFQAHDSAVKALALDVSEDFFVTGSAEGNMKV WKLAGHGLMHSFSTEHAKQSIFRNIGAGVMQVETRPGNRIFTCGADGTLKMRVLPDRYNI PSSIFDIL NT seq 9027 nt NT seq  +upstreamnt  +downstreamnt atgactctgtgtgcaacattctgcacacaggatccgagtctccagaggcccgtccggtcc cctggtaatggcttcatctgcaccgtttcacccaccctgagctcagggctccaggagagt gtaacggacacacagcagagcagtgtgactctgatcttacccccgtcaaagactggacac actgacatgttcagagtggagtacagacctgtcagaactgacctgttctttccttatgag gagaagtggagaacatggagaccagagatagtggagaagtctgatgactgtctgttgaag gtgtggtaccccaccactgggtggcgctctgctgtggtgctcccagacctcccagataag aaaggccctcaggtccacttctccttcatatacctggcccacccccgctctgtcaccggc ctgtcctggaggaagaccagcaaatacatggccaagggtagtgtgtgtaatgtgttgttg acgtcgtgtgaggacggtgtctgtaggttgtggtctgagacggtgctgccagaggacagt atcctgggtggtcagatcactgagaacacatacagctccagcctgccaggcctggggggc aaggacaagatacagcacgccctggagtcgatgagccacctgaagcacctgcgtcgtggt cgtcggaggtcgtctgccctggtgtctcacactgagctgctgccgtctcagatggggacc cacgagacacacacacaccgccacatctctcaccacgctaacgctctctgtcacttccac atctctgccagcatcaaccctgcctcggacatcccagcggtgctagcggagtctgcagtg tttactccggaggacgggagtggaggaggagggtttgtggtccactggctcaacaacaag gacctgtccttcacaacctccatggacctgttcatgctgcagctccgcaagctctcagaa cagcagctggaccaagccagcgacgacgccctcgaccagaacggctcccccattaagttt gactttgacctagatgagatgtcagagaagggttcatcagagcatggtgaggagggtgat ggtggtgagggcagcaccaaggcgtcgtccccaggctccagtagctcagtgcccctgccc tccatgttgctggagaggaagatggaggcgttaactctggagtggaataagagtcctgac atgctgtttaccatccaccccagcgacgggtccttcctggtctggcacatcaaatacctg gacgagtacatccaggggatcttcagacaggtgcaggtgtcgttctcgtcccgtatcccg gtggcgttccctacaggcgacgccaactccctgagtaagaacattctgatgtacgcctgc tccttctccaacgtggatagctccaacgctgtgggggagcaggggaagagggcccgccgg ttgccccgttctgcctctgctgggctgggttcctcagccctcagcctctctctgggccaa gctccaggcatcggccccgctgtcatgatggtgtccaaacatgtggacgggtctctcaat cagtgggcggtgacgttcgccgagcgctcggcgttctccaatgttctaaccgtgtctcat acgttccgttactgcggtcaccggttccacctcaacgaccaggcgtgtcacaccgtcctc cccctactgctgacctcctcccaccacaacgctctcctcacccccccctccgcccccggc agcatcgacctcgaccagccacccacacacacacctccccccagaggacggcgcaggaag cagctgcgtaacgcggccaccaggacgttccatgacccgaacgccatctacagtgagctg attctgtggagggtggaccacataggacccctgtcctgcactggaggggtgtcagagctg gcccgaatcaactccctacacacatcagccttctccaatgtagcatggctgcctaccctg gtacccagctctgtgctaggtacgtactgtaacagttccagtgcgtgcttcgtagcgtca gacggtaagaacttacgtctctaccaggctgtggtggacgccaggaaactactggacgaa ctgtcagaccctgagacctcaaaactagtaggagaggtatttaacatagtgagccagcag tcgacagccagaccaggctgcatcatagaactagatgtcatcactaaccagtgtggatct accacccagctccttcatgttttccaggaggactttattttggggtataaacctcaggag gacccagagctctacactacatcctacccttataccgaggagtaccaccctactccgttc tctgagaagttcttcctggttgtcatagagaaggacctgaacatgaactctgtgctgcag atgtggcacctgcacctacagtccgtgcaggcctgtgtggatgatccggtcacagagagg tcgtaccagtctcagctgacgatcccgttacaacagagtacagctgacacgtcctcctcc cctcttactcgctcagcctcgacagctaacctgcagtcagccagcaaactgatcctcagc tccaagctggtctgtagccaccgtctggacctgcctgttggggtggaggtgaccagggct acgccctccgcaggtcacctgagttcgtcgtccatctaccctgtgtgtctggccccctac ctgatcgtcaccacctgctctgactcccgcgtccggttctggcgatgctctgtggagggg ggagagactgccctggggtgtgaggagggggagaacagggtctatcactgggagccgtgg gctctactcaacgaggaggaggataacaacagtgctgtgtgtgtcccaggacgtcctgta gccgtgtcctgttcctacactggacgactggctgtctccttcaaacagccccggcccgga cacatcccgggacagagccatggtccagcaggggacttctccatgcacgtgtccatcttt gagtgtgagtctacgggggggtctgagtgggtgttggagcagaccctccacctggatgac ttcactaggccctcctctaccctggaccctggagtcagtgtagactccaacctctttgtg tacagcaggtctgacctgtacatgagtcgcgaccaccactctcccaacatcaaacactat gtccacctggactggctgtccaaagaggacgggtctcatatcctcacggtgggggtggga tccaatatcctcatgtacggtcgcatctcgggcgtggtcaacgaacagaccgcaagcaag gacggggtggcgatcatcaccctacctctaggcggcagcatcaaacagggtatccgatcc cgctggatcctgctgcgcactgtggacctgctctcctctgtagacggcaccccctccctg cccgtgtccctgtcctgggtgagggacggcatcctggtggtgggtatggactgtgagatg cacgtgtacgcccagtggcgccaggaccgcaagcccggtgatgccgagggggacagcctc tcctctgaagataacatccctgggggggttggagggagcggagggcagacggccactgct gcagccacggggggatcctcgtcggcgttcaaggggcgcgcccggtccaagagtgtgttt gagggcaacgtggcaatcgacgaggctctccaggcgccggcagggctgcaggaggggggt ctgtttgaggcggcccactccctgtcccccaccctgcctcagtaccatccaacacagctg ctggagctcatggacctggggaaggtccgccgcgccaaggccatcctgtcccacctggtg aagtgtatcgctggggaggttgctgtggtgagggacgtggaggcaggtgagggtggaacc agacgccacctgtcccggacaattagtgtgagcggcagtacggctaaagacaccatcgtg gccggccgcgacgggggacgagattacacagaaatcaactccattccccctctacccctc tacgctctgctctctgctgacctggacacctcctataagggaggagaggagggggcgaag ggagggaaggtggctgaggtagagggggcgaggaagacaggaggagatcagtacacagac ctgttccagttgcaggcggtgacgacagatgactttgtgagcttcgctacagagaaagta gagaagaagtctagattcatcaacctgtctcagtacggacccacctacttcggaccagaa cacgcacaggtgttatctagtcagctgatgcattccagtcttccaggtctgaccaggttg gaacagatgtttctggtggctctagctgatactgtagctaccaccagttcagaggtcagc agctccactgacaaacagtacacaggtggtgaggccctggatgagtgtgggttgaggtac ctgttagccatgcgtctacacacctgtctcctcacctctctacccccactgtaccgcatg cagttgctgcaccaaggtctgtctacgtgtcactttgcgtgggcgttccactcagaggct gaggaggagatgttgaatatgatcccggccatgcagagaggagaccctcagtggtctgag ctacgggctgtaggggtgggctggtggatccgcaacatcaacacactacgcaggatggtg gagaaggtgggtaaagcagcgttccagaggaacaacgatcctttagatgcggctctgttc tacctggccacgaagaagaaggctgttctctggggcctgttcaggtctcagcgtgatgag aagatgacagtgttctttaagaataacttcagtgaggaccgctggcgtaaagcagctctg aagaacgctttctctctgctggggaaacagcgctttgaacaggctgctgccttcttcctg ctggctggctccctgaaagacgccgtcgaggtgtgcttggagaagatggaagatatccag ttggccatggtagtagccaggctgtacgaggccgactatgagagcagttccacctgccaa gccatcctgtatgagaaggttttgggctgccagaggaatgggtcgaggtaccactgcacc aaactacacccggacccattcctacgcagcatagccttctggatcatgaaggactacacc aaggccctgggcacactgctagagtgcatccccaaagaggatgatgagaacccagatgtg atggtgaagtcgtgtaacccggtggtatttagtttctataactacctgaggacacacccc ctgatcatccgccgccactacgcgtcccctgagggggctgtgacatcactaggcctcacc tcggagaagagcagcgtcgacgagatcaacctcatcgaacgcaaactcttcttcaccacc gccaacgcacacttcaaggtgggctgtccagtgcttgccctggaggtgctctctaagatc cccaaggtgaccaagaagtcagtctcctcgtcccccctaagtaaaggctcttccatggcc aacgtcagctctagcctgcctctggagaatgggaaccagggggccctagactgggcctct cctgccccagttaaggccaatcctgcctggggtacagaggagagctcagccacactggac tggagccagcctctggtcaaagtggaggacgatggactgcagctggactggggagatgat aagaacgatgatgaagctgatggtggtctgacaatgaagaagactgatgtggagaccaaa gctgatgaggggtctgggggggtgagaccacctgggctgcagagagaggactctcagggt gagtctgaggtggacgtgatcgcagagcagctgaagttccgagcgtgtctgaagattctg atgacagagctcaggacgctagctacgggctatgaggtggacggggggaagctgcgcttt cagctctacagctggttagagaaggagataggagccatgcaccgtatctgcaactacaag gtggcggggaaggaggagagccaggagctggagagatgggaggatggaggaggagtagag gacgtgtttgaggagtccctggggggtggcgggggtacggaggcaggggcgtatgagcgc caccagctggggcgtaggcgtctcgcagccaagcagcttcatgctgagaggaggaaggcg tggctaaggaagaaccaggctctgctccgggtcttcctgtcctactgcagcctgcacggc gccaagggagggggggtcacctcggtacgcatggagctcatctttctgctgcaagagagc cagcaggagactacagtgaaacagctccagtcccccctgcccctccccaccaccctcccc ctcctctcagccagtatcgccaccaccaagacggtgatctccaaccctgtgctccacctc agcaaccacatccatgacatccttcacaccatcacacagatggagctgcctccacaccct gaactcatggacgacagggtgaatctcctgcacaccctggctgcctctctgtctgcctgc atctatcaagccctgtgtgacagccatagctacagcagccaggcagaggccaatcagttt acagggatggtgtaccagggtctgctgctgagtgagaggagacggctacgcaccgagagc atcgaggagcacactacacccacctctgcccccgcgcagtggccaggtgtgtcctctctg attgctctgctccagtcagctcagggcgaggatcagcccaagctcaatgtgttgctgtgt gaggctgtggtggcagtttacctgtccctgctcatccatgggctgggcatgcacgctggc aacgagctgttccgcctcgctgctcaccccctcagcaacaagatgtgggcggccgtgttt gggggtggggctaaaatcatcatcaaacccaaacggaacgccgagatcactccagcagca gcaggtaaagctagaacggactcgtcatcgtcagtgacctccgaacctgactcatggact aaggctaaaccagccgtgccagcccctcccctggcagaggatgtggacagactcagacga aggtttaatatgaggatgctggttcctggtcgtccagtaaaggaggtccctgccaccccc cctcccgtccctgcagagagacccgcctacagggagaagttcattcctccagagctcagc atgtgggactactttgtggccaaacccttcctgcccctgtcagacagtggagctctgtac gactcagatgagagcggagaggaggatgacgacgacgatgatgatgatgccttcctctct gacacacagatgactgaacactctgaccccaactcatacagttggtctctgatccgtctg gtcatggtgaaactggctctacataacgtcaagaccttcctccctctcactggactggac ttcacagacctgccggtgacgtctcctctggggaatgctgtgctgaagacactagagaac tgggagaccatactccaggagaggatgaacaagtttgatggtcctcctcccaactacatc aacacctaccccactgacctcagcacaggaggggggcccgccatactgagacacaaggcc atgctggagcctgacaacacacctttcaagaataagaaccacatttcgtttcctgcgagg cgtctctggcactacctggtgaaacaggaagttcttcaggagactctgattcgctatatc ttcactaagaagaggaagcagagcgagtgtgttgaaggctatatggatctcctcagccca aactgtgtatctggagctctcaggtccaacaaggtggagggagacttaggctacccagga aggaatgctaagatcatccacaaggagtctgacatcatcatggctttcgccatcaacagg gctaacaccaatgagatagtgctggcgtccactcacgacgtgcaggaggttgatgtgtcc actctgttagctgctcagccctacacctggataggagaggactttgacaaggagtcacac agttctgatgacgtggactaccgttcttcccacactaacgttgcccaggcctcctctacc ccgtcccacttcaaccccaaagacatggcagcctctgcatccatgccctggctggggagt gggcagaccagcatgggggctagtgtgattatgaagaggaacctgaacaatgtgaagaga atgacctcccaccccatattccagtactatatgactggggctcaggacggcagtgttcgt atgtttgagtggaacaggccacagcaactcatctgcttcagacaggcaggcaacgccaga gtcacacgcctctacttcaactcacagggaaacaagtgtggtgtatcagatggagaaggc ttcctcagtctgtggcaggtcaaccagacctcctccaaccccaagccctacgtgagttgg cagtgccactctaagacctgtggtgattttgccttcatcacttcctccagcctcatcgca acggcaggacagtccaacgacagcagaaatgtatgcctgtgggacactcttatttcaccc agtaacgccatggtgcatgccttcctgtgccatgagagtggtgcgacggtggtgcagtac gctcccaagcagcagctgttgatctcgggaggcaggaagggctttgtgtgtgtgtttgac atccgtcagagacagctgctacacaccttccaggcccacgactcagccgtcaaagccctg gcgctcgacgtctccgaagacttcttcgtaaccggctcagctgaggggaacatgaaggtg tggaagctggcaggccatggcctcatgcactcgtttagcacagagcatgccaagcagtcc atcttccggaacatcggagcaggcgttatgcaggtggagacccgccccggcaaccgcata ttcacctgcggcgccgacggaaccctcaagatgagggttctacccgaccgctacaacatc ccctctagcatcttcgacattctgtag

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