Salvelinus namaycush (lake trout): 120053047
Help
Entry
120053047 CDS
T07522
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120053047
Membrane trafficking [BR:
snh04131
]
Endosome - Lysosome transport
Others
Others
120053047
Endosome - Golgi transport
120053047
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
120053047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Neurobeachin
WD40
Laminin_G_3
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
SUKH_6
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
120053047
NCBI-ProteinID:
XP_038856226
UniProt:
A0A8U1BLA6
LinkDB
All DBs
Position
Sna8:62823423..63150196
Genome browser
AA seq
2988 aa
AA seq
DB search
MASEETPGAGRPTGQGDGAAAVSLNPGIPIRGIKMKFAVLAGLVEVGEVSNRDIVETVFN
LLVGGQFDLEMNFIIQEQDSIVCMVELLDKCEPTCQAEVWSIFTAILKKSVRNLQACTDT
GLINLVLDRVAHTDSMIADLMVDMLGVLASYSITVKELKLFFSKLQGEKGQWPPHAVKLL
SVLRSMAHRNGPDSFFSFPGKSAAAIALPPIAKWPYQSGFTFHTWLRMDPINNINVDKDK
PYLYCFRTNKGLGYSAHFVGGCLIVTSLKSKGKGFQHCVKYDFKPQKWYMVTIVHVYNRW
KNSEISCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQMGAVYLFGEAL
SAAQILAIYQLGPGYKGTFKYKAESDLLFAEHHKTLLYDGKLSSCISFSYNPRATDAQLC
LESSPKDNASIFVHSPHALMLQDVKAVVTHSVQSAIHSIGGVQVLFPLFAQLDHLQHTSD
ELDTSVCCTLLSFVMELLKNSVAMQEQVLACKGFLVIGYTLEKSSKVHVTRPVLDIVLAF
ARYLSNLQNGVLLLKQLCDHILFNPAIWIHAPAKVQLVLYTYLSTEFISTVTIYNAIRRV
GTVLQVMHTLKYYYWVVNPQDRSGVTPKGLDGLRPNQKEIHSLRAFLLLFVKQLIMKDYG
VKEDELQSILNYLLTMHEDDNLMDVLQLLVALMSEHHGSMVQAFDQRNGVRAIYKLLASN
SEGIRVQALKVLGYFLKHLPAKRKSEVMLGHGLFSLLNERLMLHSNQFSMTTYNVLFEIL
TEQICTQVIHKQHPDPDSNVKIVNPQVLKVIAALLKNSPLSPESMEVRRVFLSDMIKLFN
NSKDNRRSLLQCSVWQDWMLSLCFINPKSSEEQKVTEMVYAIFRILLYHAIKYEWGGWRV
WVDTLSITHSKVTFEQHKENLARMFRQYQRLGSEGNAAGIRTISGTSRDFEMLGQLRTNR
DQGEETAPSTVIELTIDPEGVPQNQESPSTTPPSVTSTDSASTPSPPEREGDRSQRGQAP
ITVSNMLARAEEEDNEELQQVQNQISEDQRGGAGDRAEATTRETEAKLTEDKVSSKTVEA
MAETETATDKTDDAVAASTAETGEATKPETDDAKVAKTETSDDAKTSDTDKVVRPQTDGE
KGSEKHSYKVADVLMSEDSLNEPKEPELAKQPEEQVSAVISACQKGSVAEESAVRASVQS
VSDQVRPSSTDDSMEESSFVSAAGGEEVKTEEVKTEDVVVEEEEIEEVKAEEVKTEKKKE
EESVAEVTKSAVESQETPPASVPEESQTQPPKMEEIDLDPSAPGTDPTSTEPAQQPLEST
TSPPTALEAILPPTAVGATVSKSDTSQAVAPAEAPSTKAVQPEAPQASGATEAPSTRTDT
SLKVATATAVEAGKDSAAEGPGSATKTKEIHIARLDVSSVASDTERLELKETSTPEVHQG
DTAAAGASGGQASESSSSARSTMFRIPEFRWSHMHQRLLTDLLFSIETDVQMWRSHSTKT
VMDFVNSSENVVFVHNTVHLISQVVDNLIMACGGILPLLSAATSSSHDLENIEPSQGLSV
EASVTFLQRLINLVDVLIFASSLNFTEIEAEKNMSSGGILRQSLRLVCAMAVRNCLECQQ
QSHFKPSQDNARGQQAVHSLMGAAKSMPAQSPVAVVTGGMSPIRDMDCLLQEMDINRLRA
VVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNDKKLPQRSQSARSADSNAVSG
GPDLESSVSLRRRDSGIGDDHSSVAPSEADSTAQGPDAVSEALSTLSSEVRGHRENPTAD
ARGGKNVKDILRSLVSAPADDIMVDPSLLPPAFLGAAMGNNPNQFRSFDRSVRVAPKKVG
GAPSPGSSTPVPSATAAVAAAGTPVNNVAVVSTGDASQSTTAEAAAGSASANLPSVPTLS
PMTRDTAPSMSISERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCM
KSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSHTMKDHLVRVANEAEFILS
RQRAEDIHKHAEFESHCAQYSAEKRDEEKMCDHLIRAAKYRDHVTATQLIQKIVNILTDK
HGAWGSSAFSRPREFWRLDYWEDDLRRRRRFVRNPFGSTHSKATLKAAAEHAPEEDILKG
KQSIRSHAMGNQNSESEILLDGDDDTLSSLEEKELENLTGPVNMSTSAQLVAPAVVVKGT
LSITASELYFEVDEEEASFKTIDPKILTYTEGLHGKWLFTEIRAVFSRRYLLQNTALEIF
MANRTAVMFNFPDAGTVKKVVQCLPRVGVGTNFGLPQTRRISQASPKQLYKASNMTQRWQ
RREISNFEYLIFLNTISGRTYNDLNQYPVFPWVITNYDTEDLDLTLPSNYRDLSKPVGAL
NPKRAAFFNNRYESWEDDQVPKFHYGTHYSTSSFTQMWLLRIEPFTTMFLNFQGGKFDHA
DRTFSSVSRAWRNCQRDTSDVKELIPEFYYLPEMFVNANNYNLGVMEDGTVVSDVELPPW
AKTPEEFVRVNRLALESEFVSCQLHQWIDLIFGYKQQGPEATRSLNVFYYLTYEGTINLS
SITDPMLREAVEAQIRSFGQTPCQLLIEPHPPRSSAMQVSPLMFTEQMQQDVIMVLKFPS
NSPVAHVAANTQPGLAAPAIITVTANRLFAVNKWHGLAGHQGSSVQDQQYQLPVEIDPLI
ASNVGTHRRQITDLLDQSIHIHSQCFIITADNRFILLCGFWDKSFRVYSTDSGKLTQIVF
GHRDVVTCLARSESYIGGDCYVLSGSRDATLLLWYWNGKHSSIGENPGTEFVTPRAILTG
HDCEVTCASVCAELGLVISGCREGPCLIHSMNGDLLRTLEGPGGCVQPRLIQSSTEGHAV
VYYDKGHFCFFSINGKLLGHMEVEENIRAMLLSRDGQYLLTGGDGGVLSVWQVHNLKQMF
TYPGCDAGIRSMAMSNDQRCIITGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8967 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgaggagacgcctggtgctgggcgaccaaccgggcaaggtgatggagctgcg
gcggtgtcgctcaaccctgggatcccaatccgaggaatcaaaatgaaattcgctgtccta
gccggcctggtggaagttggggaagtttccaaccgggacattgtggagaccgtcttcaac
ctgttggtggggggccagtttgacctggagatgaacttcattatccaggagcaggacagc
attgtgtgcatggtggagctgctggacaagtgtgagcctacgtgccaggcggaggtgtgg
agcatcttcacggctatcctgaagaagagcgtgaggaacctgcaggcctgcaccgacacg
ggcctcatcaacctggtcctggaccgcgtggcccacactgacagcatgatcgcagacctg
atggtggacatgctaggagtgctggccagctacagcatcacagtcaaggagctaaagttg
ttcttcagcaaactgcaaggagagaaaggccaatggcctccccatgcggtgaagctgctg
tctgtcctgaggagcatggcccaccggaacggacctgactctttcttcagcttcccaggg
aagagtgctgctgctatagctctgccccctatagccaaatggccgtaccagagtggattc
accttccacacgtggctccgcatggatccaatcaacaacatcaatgttgacaaggacaag
ccttacctgtactgttttcgcaccaacaaaggtctgggatactctgcacactttgtgggc
ggctgtttgattgtgacctcgttaaagtccaaggggaagggattccagcactgtgtgaaa
tatgacttcaaaccacagaagtggtacatggtgaccatcgttcacgtctacaaccgctgg
aagaacagtgagatcagctgctacgtcaatggagagctcgcctcctacggagaaatcacc
tggttcgtcaacaccagcgacactttcgacaagtgtttcctgggttcgtcagagacggcg
gacgccaaccgtgtgttctgtggtcagatgggggcggtgtatctgtttggcgaggccctc
agtgcagcccagatcctggccatctaccagctggggcctggttacaagggcacgttcaag
tacaaggctgagagtgacctcctgtttgctgagcaccacaagaccctactgtacgacggc
aagctgtcctcctgcatctccttctcctacaacccccgcgccaccgacgctcagctgtgc
ctggagtcctcccccaaggacaacgcctccatcttcgtccactcgccacacgcactcatg
ctgcaggatgtgaaggctgtggtgacccactcggtccagagtgccatccactccattggg
ggagtgcaggtcctcttccccctgtttgcacagctggatcacctccagcacaccagcgat
gaactggacacctctgtctgttgcactttgctgtcctttgtgatggagctgctgaagaac
tctgtggctatgcaagagcaggtcctggcctgcaagggctttctggtcatcggttacacc
ctggagaagtcttccaaggtgcatgtgactcggcccgtgctggacatcgtgctggccttc
gcccgttacctcagcaacctgcagaacggcgtcctgctgctcaagcagctgtgtgaccac
atcctgttcaaccctgccatctggatccatgcccctgccaaggtgcagttggtgttgtac
acttacctgtcaaccgagttcatcagcacggtgaccatctacaacgccatccgcagggtg
ggcacggtactgcaggtcatgcacacgctcaagtactactactgggtcgtcaacccccag
gaccgcagcggagtcacgcccaagggcctcgacggtctgagaccaaatcagaaggagatc
cactctctcagagcttttctgctgctgtttgtgaaacaactcataatgaaggattacgga
gtgaaggaagatgagcttcagagtattctcaactacctgctcaccatgcatgaggacgac
aatctaatggatgtgcttcagctgctggtggctctgatgtcggagcatcacggctccatg
gtgcaggcctttgatcagcgcaacggagttcgggccatttataagctgctggcttccaac
agtgaaggaatcagagttcaggcactcaaagtcttgggctacttcctcaaacacttgccc
gctaagaggaagtccgaggtcatgctgggtcacggcctcttctccctgctcaacgagcga
ctgatgctccactccaaccagttcagcatgacaacctacaacgtgctcttcgagatcctg
accgagcagatctgcactcaagtgatccataaacagcatccggaccccgactccaatgtg
aagattgtcaacccgcaggtcctgaaggtgatcgctgccctgctgaagaactctcccctc
tccccagagagcatggaggtgcgcagggtcttcctgtcagacatgatcaaactgttcaat
aacagcaaagataacaggaggagcctgctgcagtgctcggtgtggcaggattggatgctc
tctctgtgcttcatcaaccccaagagcagcgaggagcagaaggtcactgagatggtgtac
gccatcttccgcatcctgctctaccacgccatcaagtacgagtggggcggctggcgcgtg
tgggtggacaccttgtccatcacccactccaaggtgacctttgagcagcacaaggagaac
ctggcccgtatgttccgtcagtaccagagactgggctccgagggcaatgcggctggtatt
cggaccatttccgggaccagccgagactttgagatgctgggccagctccggaccaacagg
gatcagggggaggagaccgcaccctccaccgtgatcgagctcaccattgacccagagggg
gtcccccagaaccaggagtctcccagcactacccctccctcagtaacctcaacagattct
gcctccacccccagccctccagagagagaaggagatagaagtcagaggggtcaagcaccc
ataacggtgtccaacatgctggccagagctgaagaagaggataatgaggaactacagcag
gtccagaatcagatctctgaggatcagagaggaggtgctggtgacagagctgaagctact
acacgggagactgaagctaaacttactgaggataaagtcagcagtaagaccgttgaggcc
atggctgagactgagaccgccacagacaagactgatgatgctgtagcagctagcacagct
gaaacaggcgaagcgaccaagccagaaactgatgatgcaaaggtggctaaaacagaaaca
agcgacgatgctaaaacatctgataccgacaaagtagtaagacctcaaacggatggagag
aaggggtcagaaaagcacagctacaaagtcgccgacgttcttatgtctgaagattccctg
aacgaacccaaggaaccggaactggcaaagcaaccggaggaacaggtctctgctgtgatc
tcggcctgccagaagggcagcgtggcggaggagtcagcagtcagggcatctgtccagtca
gtcagtgaccaggtccgacccagctccaccgacgacagcatggaggaatcctcttttgtc
tccgccgctggtggagaggaggtgaagacagaggaggtgaagacagaggatgttgtagtt
gaggaggaggagatagaagaggttaaagcagaggaggttaaaactgaaaagaagaaggaa
gaggagagtgttgccgaggtcacaaagtcagcagtggaaagtcaagagacaccacctgct
tctgtacctgaggagagtcagacacaaccccctaaaatggaggagattgacctggacccg
tctgcaccaggcaccgaccccaccagcacagagccagcacagcagcctttagagtccaca
acatcgccccctacagccctggaggccatactaccaccaacagcagtaggggccactgtc
tctaaatctgacacctcacaggctgtagcaccagcagaggcccccagcaccaaggcggtc
cagccagaagccccacaggcctcaggtgccacagaggcccccagcaccaggactgatacc
tctctgaaggtagccactgctactgctgtggaggcagggaaagacagtgcagcagagggc
cctggctctgccaccaagaccaaagagatccacattgccaggctggatgtgtccagtgtg
gcctcagacacagagagactggagctaaaggagacctccacacctgaagttcatcagggc
gacacggctgcagccggtgcctcaggaggccaggccagcgagagcagctcctccgcgcgc
tccaccatgttccgtattccagagttccgttggtctcacatgcaccagcgcctgctcaca
gacctgctcttctccatcgagactgacgtgcagatgtggaggagtcactccactaagacg
gtgatggactttgtgaacagcagtgagaatgtggtctttgtccacaacacagtacacctc
atctctcaggtggtggacaacctcatcatggcctgtggaggcatcctgcccctgctttct
gctgccacatcctcctcacatgatctggagaacattgagccgtcccagggtctgtcggtg
gaggcgtcggtcaccttcctgcagcgcctcatcaacctggtggatgttctgatcttcgcc
tcctccctcaacttcaccgagatcgaggctgagaagaacatgtcctctggcggtatcctc
agacagagccttcgcctggtgtgtgccatggctgtgaggaactgtctggaatgtcagcag
cagtctcacttcaagcccagccaggacaacgcccgcggccagcaagccgtgcacagcctc
atgggagccgccaagtccatgcccgcgcagagccctgttgctgttgtgacaggagggatg
tctcccatcagagacatggactgtctccttcaggaaatggacatcaaccgcctcagagcc
gtggtcttcagagatatcgaggacagtaagcaggctcagttcttggccctggccgtggtt
tacttcatctctgttctcatggtgtccaagtaccgagacatcctggagccccaaaacgac
aagaaactcccccagcgcagccagtctgccaggagcgcagacagtaatgccgtctctggc
ggtcccgacctggagagcagtgtgtccctccgtcgccgagactctggcatcggggatgac
catagctccgtggcccccagcgaggcagactccactgcccaggggcccgacgccgtgtcc
gaggccctgtccaccctctcctcagaggtcagaggtcacagagagaaccccacggcggac
gccaggggcgggaagaacgtgaaggacatcctgcgcagcctggtctcggcgcctgctgat
gacatcatggtggaccccagccttctgccgccagccttcctgggagctgctatgggaaac
aaccccaaccagttcagatcctttgacagaagcgttcgggtggcgcccaagaaagtgggc
ggggctccgtccccaggctcctccactcctgtcccatcagccaccgctgctgtggcggcc
gccgggacaccagtcaacaacgttgccgtggtttccacgggcgatgcctcccagagcacc
accgctgaggctgcagccggatcagccagtgccaacctgccatctgtccccacgctgtcc
ccaatgacccgggacacagcccccagtatgagtatctcagagaggctggagcatgctctg
gagaaggctgcccccctactgagagagatctttgtggactttgcccccttcctctctcgc
accctgctgggtagtcacggacaggagctcctcatcgagggcaccagtctggtgtgtatg
aagtccagcagttcggtggtagagctggtcatgctgctctgttctcaggagtggcagaac
tctatccagaagaacgcaggcttggccttcatcgagctggtcaacgagggcaggctactg
agccacaccatgaaggaccacctggtgcgggtggccaatgaggctgagttcatcctgagc
cgacagagagccgaggacatccacaaacacgctgagtttgagtcccactgtgcccagtac
tcggctgagaagcgtgatgaggagaagatgtgcgaccacctgatccgagcagccaagtac
cgtgaccacgtgacagccacccagctcatccagaagatagtcaacatcctgacggacaaa
cacggtgcctggggaagctctgccttcagccgtcctcgggagttctggcgcctcgactac
tgggaggacgacttgaggcggcgccggcgcttcgtcaggaaccccttcggatccactcac
tcaaaggccacgctcaaagctgcagctgaacacgctccggaggaagatatcctcaaaggc
aaacagtccatcagaagtcacgcgatgggaaatcagaactctgagagtgagatattgttg
gatggcgacgatgacactctatcatccttggaggagaaggaattggagaacctaacaggc
cctgtaaacatgagcactagcgcacagctggtcgccccggcggtggtggtgaaaggaacg
ctgtccatcaccgcgtctgaactctacttcgaagtggatgaagaagaggccagctttaag
acgatcgatccaaagatcctaacctacacagagggcctccatggtaaatggctgttcaca
gagatcagggctgtcttctccagacgttacttgctacagaacactgctctggagattttc
atggccaacagaactgcggtcatgttcaacttcccagatgcaggcacggtcaagaaggtg
gtccaatgcctccctcgcgtgggggtgggcaccaactttggcctcccacagaccaggcgt
atctcccaggccagtcccaagcagctctacaaggcctccaacatgacccagcgctggcag
cgcagagagatctccaactttgagtacctgatcttcctcaacaccatctctggccgtacg
tacaacgacctgaatcagtaccccgtcttcccctgggtcatcacgaactacgacactgaa
gacctggacctcactctgcccagcaactacagagacctgtccaagcccgttggtgccctg
aatcccaagagggcggcgttcttcaacaaccgctatgaatcctgggaggacgaccaggtg
ccgaagttccactacggaacccattactccacctcctccttcacccagatgtggctgctg
cgcatcgaacccttcaccaccatgttcctcaacttccagggagggaagtttgaccacgct
gaccgcaccttctcctccgtgtcccgagcctggaggaactgccagagagacacgtccgac
gtcaaggagttgatcccagagttctactacctccctgagatgtttgtaaacgccaacaac
tacaacctgggggtgatggaggatgggactgtggtgtctgacgtggagctgccgccgtgg
gccaagacccccgaggagtttgtacgcgtcaacagactggctctggagagtgagtttgtg
tcgtgccagctgcaccagtggatcgacctgatctttggctacaagcagcagggtcctgag
gccaccaggtctctcaacgtcttctactacctgacctatgaagggaccatcaacctcagc
tccatcaccgaccccatgctgagagaggctgtggaggcacagatcaggagtttcggacag
accccatgtcagctgctcatcgagccacacccaccaaggagctccgccatgcaggtgagc
ccgttgatgttcacggagcagatgcagcaggatgtgatcatggtgttgaagttccccagc
aactctcccgtggcccacgtggccgccaacacccagccgggcctcgccgcgcccgccatc
atcaccgtcaccgccaaccgcctcttcgccgtcaacaagtggcacggcctggccggtcat
caaggctcctctgtgcaggaccagcagtaccaactgcccgtggaaatagaccctctgata
gccagtaacgtggggacccaccgtcgtcagatcacagacctgttggaccagagcattcac
atccactctcagtgtttcatcatcaccgcagacaaccgcttcatcctgctctgtggcttc
tgggacaagagcttccgcgtctattccactgactcagggaagctgacccagatagtgttt
ggtcaccgtgacgtggtgacgtgtctggccaggtctgagtcgtacatcggaggggactgc
tacgtcctgtcaggctccagagacgccacgttactgctctggtactggaacggaaaacac
agcagcattggagagaaccccggaactgagtttgtgacgcccagagccatcctgacgggt
catgactgtgaggtgacctgcgccagtgtgtgtgccgagctgggactggtcatcagtggc
tgcagagagggcccgtgtctgatccattccatgaatggggatctgctgcggaccctggag
ggcccggggggctgcgtgcagccccgtctcatccagtcctctacagagggccacgccgtg
gtctactacgacaagggacacttctgcttcttctccatcaacggaaagctgctgggacac
atggaggtggaggagaacatcagggccatgctgctgagtcgggacggacagtacctgctg
acggggggagacgggggagttctgtctgtctggcaggttcacaacctcaaacagatgttc
acctaccctggctgtgacgcaggcatccgctccatggccatgtccaacgaccaaaggtgc
atcataaccggcatggcgtctggtagtatagtcctgttctacaacgacttcaacaggtgg
caccacgagtaccagaccagatactga
DBGET
integrated database retrieval system
