Salvelinus namaycush (lake trout): 120053186
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Entry
120053186 CDS
T07522
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120053186
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
120053186
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Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
120053186
NCBI-ProteinID:
XP_038856277
UniProt:
A0A8U1BP44
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Position
Sna9:19758526..19890674
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AA seq
944 aa
AA seq
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MSSGSCKTRSPHLVFLHAPQTVLCYAREMLLAGKRQSRCNSRVASMDGSITSVGSLAQGQ
GTEVAGATTTGTVKKDPRVSFSNAPSRKASSSVQNQQKMNSVSCFKSEDISQIVTDDGEP
HDNRTYMQRQFSSMLQPGVNKFSLRMFGSQKAVEKEQQRVKSAGNWIIHPYSDFRFYWDF
TMLMFMVGNLIIIPVGITFFKDETTAPWIIFNVVSDTFFLMDLVLNFRTGIVLEDNTEII
LDPKKIKRTYLKTWFVVDFISSIPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLR
LLRLSRLIRYVHQWEEIFHMTYDLASAVMRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPQ
DCWVSLNKMVNDSWSELYSFALFKAMSHMLCIGYGRQAPESMSDIWLTMLSMIVGATCYA
MFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEE
SILEELNEPLREEIVNFNCRKLVASMPLFANTDPNFVTAMLTKLRFEVFQPGDYIIREGT
IGKKMYFTQHGVTSVLTKGTMGMKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVD
NFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILMHKVQHDLNSGVLNNRENEMIQEIVK
YDREMVQQVDLHRPRVMSMSNPPTHGGIFAPPGPPQSSAIATFQQAVAMSFCPPMVGPLA
GGEGLQSPRMVRRFKVMQSVASPVPASPTPQTQQTMHPQLHASGAFVTALSSPPIQSPLV
AGGRTFQYGPSSGSQVSLVQQVVPSPTHRPNTHNSTRSLHIGSLGQNARALSASQPSLPQ
GGAQPMAPCPSQSTRVSSTSIGPPQTPSGHAGVRSAMTHRMVLPHQMSAGAFPLASLPGT
VTSLGMGMGMGMGVGMLDSGLPKRDSIASLPETDRARSRLSSNL
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtggctcatgcaagacgaggagtccgcacctagtgttcctacacgcgccacaa
actgtgctctgttatgccagggagatgctactggccgggaaaaggcaatctagatgtaat
tcaagagtcgccagcatggacggttctattacctcagtggggtccttagcacaggggcaa
gggaccgaggtggccggggcaacaactactggcactgtgaaaaaggacccccgagtttcc
ttctcaaatgccccaagtagaaaagcatcgtcctctgtgcagaaccaacagaagatgaat
tctgtctcatgttttaaatctgaggatatatcccagattgtgacagatgatggggaacca
catgacaatcggacatacatgcagcggcaatttagttccatgcttcagcctggagttaac
aaattttcactgcgtatgtttgggagccaaaaagctgttgaaaaggaacaacagcgtgtc
aaatcggccggtaattggattattcatccatacagcgatttcaggttctactgggatttc
accatgttgatgttcatggtgggcaacctcatcatcatccccgtggggatcaccttcttc
aaggacgagaccaccgcgccctggatcatcttcaacgtggtctctgacaccttcttcctc
atggacctggtcctcaacttccgcacaggcatcgttttagaggacaacactgagatcatc
ctggaccccaagaagatcaagaggacgtacctgaagacctggtttgtggtggactttatc
tcctccatccctgtggattatatcttcttgatcgtggagaaggggattgactctgaggtg
tataaaacagccagagccctgaggatcgtgcgctttaccaagatcctcagtctgctgagg
ctgctcaggctgtccaggttaattcgctatgtccaccaatgggaagagatcttccatatg
acctatgacctggccagtgcagtgatgcgtatcttcaacctgattggtatgatgttgctg
ctgtgtcactgggatggctgtttgcagttcctggttcccatgctgcaggatttcccccag
gactgctgggtctcccttaacaagatggtgaatgactcgtggagcgagctgtactccttt
gccctgttcaaagccatgagtcacatgctgtgtatcggttatgggcgccaagccccagag
agcatgtctgatatctggttgaccatgctcagtatgatcgtgggagccacctgctacgcc
atgttcatcggccacgccaccgccctcatccagtccctggactcatcccggcgccagtac
caggagaagtacaaacaagtggagcagtacatgtctttccacaaactgccagctgacttc
cgacagaaaatccatgactactacgagcacagataccagggcaagatgtttgatgaggag
agcatcctggaggagcttaatgaaccactgcgggaggaaattgtcaacttcaactgccgt
aagctggtggcgtccatgcccctgtttgccaacaccgaccccaactttgtgacggctatg
ttgactaagctccgcttcgaggtcttccagcctggagactacatcatcagggagggcacc
atcggcaagaagatgtacttcacccaacacggtgtgaccagtgtcctgaccaaaggaacc
atgggcatgaagctctcagatggatcctattttggagagatctgtctgttgacccgaggc
agacggacggccagtgtgcgagcggacacgtactgccgtctctactccctgtctgtggat
aactttaatgaggtgctggaggagtaccccatgatgagacgagccttcgagactgtggcc
atcgaccgactggaccggatagggaagaagaactcgatcctaatgcacaaggttcagcat
gacctcaattcgggcgtcttgaacaaccgggaaaacgagatgatccaggagattgtgaaa
tatgaccgtgagatggtgcagcaggtggacctgcataggccccgtgtcatgtccatgtcc
aacccacccacacatggcggcatcttcgccccccctggccctccccagagctcagccatt
gccaccttccagcaggctgtggccatgagcttctgtccccccatggtaggccctctggca
gggggtgagggcctgcagtccccccggatggtgcggaggttcaaggtgatgcagagtgta
gccagcccagtgccagcctcccctaccccccagacccagcagaccatgcatccccagctg
cacgccagtggtgcattcgtcacggccctctccagcccccccatccagagccccttagtg
gctgggggacggacattccagtacgggccctcttctggctcccaggtctccctggtccag
caagttgtgcccagccccacacacaggcccaacacccataacagcacccggtctctgcac
attggcagtctgggtcagaatgccagggcactgtccgcctctcagccctccctgccccag
ggaggggctcagcccatggctccctgcccatcacagtccacccgtgtctcctccacctcc
atcgggccccctcagaccccctcgggccatgcaggggtcaggagcgctatgactcatagg
atggtgcttccccaccagatgtctgcgggggcgttccctctagcctccctcccggggact
gttacatcgctggggatgggcatggggatgggcatgggagtgggcatgctggactcagga
ttacccaagagggattctatagccagcctccctgagacagaccgtgccagatcgaggctc
tcttccaatttgtga
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