Salvelinus namaycush (lake trout): 120053294
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Entry
120053294 CDS
T07522
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04510
Focal adhesion
snh04512
ECM-receptor interaction
snh04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120053294 (lamb4)
04518 Integrin signaling
120053294 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120053294 (lamb4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
LAMB1
EGF_LMN_ATRN
LAMB4
Motif
Other DBs
NCBI-GeneID:
120053294
NCBI-ProteinID:
XP_038856357
UniProt:
A0A8U1BNJ1
LinkDB
All DBs
Position
9:46692679..46708547
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AA seq
1788 aa
AA seq
DB search
MVSLFLLVLLVPGALLQEDCDVNSCHPQLGDLMVGRAAQLSASSTCGRNGPQNYCILGYL
EDGQKCFKCDSRQPYNLYNNQNSHQIENIITTFGPERKMKWWQSENGVHQVSIRLDLETL
FQFSHLVLTFKSFRPAAMLVERSKDYGYSWKVFRYFAEDCASHFPGVSQGPAGSTDDVVC
DSRYSASEPSTDGEVVLKALDPSFDIENPYAPHIQEQITLTNLRVNFTHLFTLGDTLLGR
KKRNPQEKYYYALYEMVVRGSCFCNGHASMCMPVDGTRGDVLNEPGMIHGRCVCQHNTVG
TNCERCQDFYNDVPWRPAGQTDPHVCRRCNCHGHSETCHFDIDQYQASGGVSGGVCDGCR
HDRMGPQCERCRPYLYQDPQLSMEDPRGCIPCDCDLTGSLDNGLCDPVSGRCMCKENVAG
DRCDRCKFGFYGFSQEDPTGCQRCRCNFLGSVLTPYPCDQVTGQCVCQRLAMGPLCDQCL
PGYWGLGNTVHTCSPCDCDHGGAYSSTCSSLDGQCQCLPNMVGRNCGDPAPGHFLAALDY
YLYEAENAAPLEGKNSSSLLKPTDLPVCEEYYRQQGYDIKYQNGRLVLTRRSKRQARRRR
QGQRSIPLDPGSALQIVPRERTPDVPITWTGPGFVRVLDGAGLRFTVDNLPASLDYHLVI
RYEPESPDDWMASVSIVPLLAGDGGCPTNPKGEKTLNIPGAARVAILDTPVCLNAGSRYY
VDITFRKQPNSNPQSSSHTLIDSMGLIPKMESVQDFCSQSELDSFRRFRCFELAAEQETL
PDVCYGLIGSLSARIHNGAMLCRCNIQGSHGPYCSKFGGLCECKANVVGRCCDSCAPLNF
GFGSNGCAPCECDPRGAVAELCDQVRGQCPCRMEVGGRRCDRCLSGYYGFPLCRPCKCNG
LAELCDQDTGACLDCREHSTGYNCESCVEGYFGDPVSREPCKPCLCPDTQSSGRFFASTC
NKDPESGSLTCDCLAGHTGLRCDACSAGFYGGLTVPGGGCDECLCNNNIDPADSDACDSV
TGECLRCLHNTQGPRCQSCKPGYYGDALAQDCKECSCDRQGTDVTQCPLGSPCFCDPLTG
QCPCRAGAVGTLCDECATGFWNIQGEYGCQPCKCDPANSFNNHCDKVTGHCQCRTEFGGR
QCDECGENHFGNPDLQCVSCDCNMEGTARPACNPLTGECLCRVGVMGIFCDECAPGYDQV
FPACFPCHPCAVLWADNVTDVHRAAQRMRTFIPDHGEQLEPGHSRQLQRMLEMHSKLDYL
GNLTGRSLPRVKDVEKLCVRISKLKDSIDPNAIIVDSSSLLNTEIDNIHHEFKMLLDNLR
NKIGEAPTLDLKEMQEALGKIRKQHADFMADEKKVKEAERALENSMDTRQEIKDHLSSCS
ILGDMEGLEKKVKALSVAKLNKNICGGPGDEECSKSECGGALCRDFLGQRECGGPTCKGS
FPVSHNATKTAEQVANDLIDLLQKLKDSKIKINEAKQMTQGTQEQAEDLQKKITDSKEMF
KREKNDTKDLINRVKDYLTDEMVTPEDIENLVKAVLAIQLPGSPDDIRSMIQNIRGVLTN
FIEFKEDLKKLKDQAKTAQDLLEKAQDIRDRTKGIDVTDLKKTMTDTENTQDKVEQDLEK
AKESNGVADKMIKEIEKKLNNIETNLNSTRTPEMLEEIEVLKSKTEMNREQAGQAKADAD
AAIGAATDAEKGLDKVTTLFGRLKTGNTNQNNNEVANERLKNITMEAEKVAKDVQDKIQQ
IDDLEKKIQDFIRNKEDKAKEVAMLLEMVEALQKEIAARVDGYINCTS
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atggtttctctgttcctgctcgtgttgctggtgcctggggccctcctccaagaagactgt
gatgtcaactcttgccacccccagctgggggacctgatggtgggccgcgctgcccagctc
tcagcctcctccacctgtggacggaacgggccccagaactactgcatcctcggatacctg
gaggatgggcagaagtgtttcaaatgtgactccaggcagccctacaacctctacaacaac
caaaacagccaccagattgagaacatcatcaccacctttggccctgagcgcaagatgaag
tggtggcagtctgagaacggggttcatcaagtcagtatccggctggatctggagactcta
ttccagttcagccatctcgtcctcactttcaagagtttccgtcctgccgccatgctggtg
gagaggtccaaagactacgggtacagttggaaggtgttccgctactttgccgaggactgt
gcctcccacttccctggggtctcacaagggccggctggcagcaccgatgacgtcgtctgt
gacagcagatactccgcctcagagccatctactgacggagaggtggtgttgaaggctcta
gatccaagctttgacatagagaacccatatgctcctcatattcaagagcagatcaccttg
accaacctgcgggtcaacttcacccatctgttcaccctgggtgacaccctactggggcgg
aagaagaggaaccctcaggagaagtactactatgccctgtacgaaatggtggtgcgcggc
agctgcttctgcaatggccatgccagcatgtgcatgccggtggatggcacccggggtgac
gttttaaatgagcctggcatgattcacgggcgctgtgtatgccaacataacactgtgggc
acaaactgtgagagatgccaggacttttacaacgatgtcccctggaggccggccggccaa
actgacccacatgtctgcagaaggtgtaactgtcacggtcattcggagacgtgtcacttc
gacatagaccagtaccaggccagtgggggggtcagtgggggggtgtgtgacggctgccga
cacgaccgcatgggtccccagtgtgaacgctgccgaccctatctctatcaggacccccag
ctctccatggaagaccctcggggctgtatcccgtgtgactgtgacctgacggggtccctg
gataatggcctgtgtgaccccgtgtcgggccgctgcatgtgtaaggagaacgtggcgggg
gacaggtgtgatcgctgtaaatttggcttctacgggttcagccaggaggaccccactggc
tgccagaggtgcaggtgtaacttcctgggtagtgtcctgaccccctacccatgtgaccag
gtgacaggccagtgtgtatgtcaacgcctcgccatgggacccctgtgtgaccaatgtctg
ccaggctactggggtctggggaacactgtacacacctgctcaccttgtgactgtgaccat
ggaggagcctacagcagcacgtgctcttcattggacggccagtgtcagtgcctgccaaac
atggtgggtcggaactgtggggatcctgcccctggacatttcctggctgctctagactac
tacctgtacgaggcagagaacgctgccccactggaaggaaaaaactcctcctctctgttg
aaacccacagacctgcctgtgtgtgaggaatactacagacagcagggctatgacatcaaa
tatcaaaatggccgcttggtcctgaccaggagaagcaaaagacaagccaggaggagaaga
cagggacagaggtccattcccctggacccgggctcagcactccagattgtgccccgggag
aggacaccagatgtaccaatcacttggaccggtccaggattcgtgcgggtcctggatggt
gctgggcttaggttcactgtggacaacctcccagcgtccctcgactaccatctagtcatc
cgctatgaaccagagtcgccagatgactggatggcctctgtgagcattgttccattattg
gctggtgacggaggttgtcccactaacccgaaaggggagaaaaccctcaacatacctggg
gctgccagggttgccattttggatacgcctgtgtgtctgaatgcgggaagtagatattat
gtggacatcacttttaggaagcagcccaactctaaccctcagtccagctcacataccctc
atcgactcaatgggtctgatccctaagatggagtctgtgcaggacttctgttcgcagagt
gagctggactcgttcagaagattccgctgttttgagttggctgctgagcaggagaccctg
cctgatgtgtgttatggcctcattggaagcctgtcggctcgcatacacaacggtgccatg
ctttgcaggtgtaacatccagggttctcatggcccatactgcagtaaattcggagggctc
tgtgagtgcaaggccaacgtggttggccgctgctgtgactcctgcgcccccctgaacttc
ggcttcggatccaacggctgtgcaccctgtgagtgtgaccctcgcggtgcagtggcggag
ctgtgtgaccaggtcagaggtcagtgtccgtgtcgtatggaggtgggcgggcgacgctgt
gatcgttgcctgtcagggtactacggcttcccactgtgtcggccctgtaagtgcaacggc
ctggctgaactgtgtgaccaggacactggagcctgtctggactgcagggaacactccacc
ggatacaattgtgagagctgtgtggagggttactttggtgacccagtctccagggagccc
tgtaagccttgtctgtgccctgacactcagtccagtggacggttctttgccagcacctgc
aacaaggacccagagtctggtagcctgacttgtgactgtctggctggacacacaggtctc
cgctgcgatgcctgctccgctggtttctacggcggcctgaccgtgccgggcggcggctgc
gacgagtgtctctgtaacaacaacatcgaccctgctgacagtgacgcgtgtgacagtgtg
acgggcgagtgtttgcgttgcctccacaacacccagggaccccgctgtcagagctgtaag
cctggctactatggagacgcactggcccaggactgcaaagagtgctcctgtgaccggcag
gggacggatgtgacccagtgccctctgggcagcccgtgtttctgtgacccgctgacgggt
cagtgcccgtgtcgggcgggcgcggtgggaacgctgtgtgacgagtgtgccaccggcttc
tggaacattcagggagagtacgggtgccaaccgtgcaaatgtgaccctgctaactccttc
aataaccactgtgacaaggtgactggtcattgccagtgtcgtactgagtttggaggaaga
cagtgtgatgagtgtggggaaaatcactttgggaaccctgacctgcagtgtgtttcctgc
gattgtaacatggagggtaccgcccgccccgcctgcaacccattgacgggtgagtgtctg
tgccgcgttggtgtgatgggtatcttctgtgatgagtgtgcccctgggtatgaccaagtc
ttccccgcctgcttcccgtgccacccctgtgctgtcctgtgggctgacaacgtcaccgac
gtccaccgtgccgcccagaggatgcgcaccttcatccctgaccacggcgaacagctggag
cctggacacagtcgtcagttgcaacgaatgctggagatgcactccaagctggactatctg
gggaacctgacagggagatctctacctcgggtgaaagacgtggagaagctgtgtgtcaga
atctcgaaactcaaagactccatagaccccaacgccatcatcgtggactcatcatctctt
ctgaacactgagatcgacaacatccaccacgagttcaagatgctgttggataacttaagg
aacaaaatcggcgaggctccaacactagatctaaaggaaatgcaggaggccctgggtaag
atccggaagcagcatgcagacttcatggctgatgagaagaaggtgaaggaggccgagagg
gccctggagaactccatggacacacggcaggaaatcaaagaccatctgtccagctgcagc
atcttgggagacatggaggggctggagaagaaggtcaaggctctgagtgtggccaaactc
aacaaaaatatctgtggaggcccaggtgatgaggaatgctccaaatcagagtgtgggggt
gcgctgtgtcgagacttcctgggacagagagaatgtgggggtcctacgtgcaagggcagc
ttccctgtgagccacaacgccacaaaaacagctgagcaagtagcgaatgaccttatcgac
ctgctccaaaaactaaaggactccaagatcaagatcaatgaggccaaacagatgacccaa
ggcacccaggagcaggcagaggatctacagaagaagatcactgacagcaaggagatgttt
aagagggagaagaatgacaccaaggacctcatcaatagggtcaaagactacctcacagat
gagatggtgacaccagaggacatagagaatttggtcaaggctgttctggccatccagctg
ccgggctctccggacgacatccgctccatgatccagaacatccggggcgtgctgaccaac
ttcattgagttcaaggaggatctgaaaaaactaaaggaccaagccaagacagcccaggac
ctgctggagaaagctcaggatatcagggacagaaccaagggtattgatgttacggatctc
aagaaaaccatgacggacactgagaatacacaggacaaggtcgagcaagacctggagaag
gctaaggaaagcaatggcgtggcggacaagatgattaaagagattgagaagaaactgaac
aacatagagactaacttgaactctactagaactccagagatgctggaggagattgaggtt
ctgaagagcaagacagagatgaacagagagcaggcggggcaggccaaagctgatgcagat
gcagccataggtgccgctactgacgcagagaaggggcttgacaaggtgactacgctgttt
ggtaggctaaagacgggaaacacaaaccagaacaataatgaagtggccaacgaacgcctg
aagaacattactatggaggcagagaaagtcgcaaaagatgtccaagataaaattcaacaa
attgacgacttggagaaaaagatccaagacttcatcagaaacaaagaggacaaggccaag
gaggttgccatgttgctggagatggtagaagccctccaaaaggagattgctgcgcgtgtg
gatggttacattaactgtacctcctaa
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