KEGG   Salvelinus namaycush (lake trout): 120053329
Entry
120053329         CDS       T07522                                 
Name
(RefSeq) reelin-like
  KO
K06249  reelin [EC:3.4.21.-]
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04510  Focal adhesion
snh04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:snh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120053329
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120053329
SSDB
Motif
Pfam: Reelin_subrepeat-B EGF_Teneurin EGF_TEN EGF_2 EGF_Tenascin
Other DBs
NCBI-GeneID: 120053329
NCBI-ProteinID: XP_038856383
UniProt: A0A8U1BK26
LinkDB
Position
Sna9:55458031..55513719
AA seq 2180 aa
MDLGSHFPRLLRRCPVRVKWYRRCVQMGPVSQAVEEVPGTSDGMQVESVERDVAEGSQGF
VAPVEEDMDMDIFDIPIDMIAAGNDSIYNLDEESSVYRDAPAFALDGVYISEACPNHCGG
HGDCISGVCFCDMGYTVEQDSCVPAVASPTELAEGFESKLSPVWQTLSGGQVGGGCGTIS
EGKALYFSSSGKREARTVPMDTTNTRLVQFYIRIGGKNVGPTCTRPRSRNEGVIVQFSTN
NGVQWQFLRELDFGSFLDSQVVTIELPPPAKTPYTVFRWWQPQQGKHSAQWALDDVLIGI
NDSSRTGFHDKFDGTSPLRHNWYRIQGGEITVDCLSLDTALSFNSDTTDKKPRYAESWDF
EVSGSSFLQFELSMGCSKVATSSHGVRLEYSTDCGRHWALLTPECVPPAIGCAGYTMSSV
YTATQYNRWRRVTVYLPSAANSPRTRFRWIQPHFIPGADGWALDNVLLAPGCPWMCSGHG
LCDNGCCLCDRGYGGAHCVPLAPLPSILRDDFNENLAAEQWPEVYGAERGTLSGEPLKSG
TALIFKGEGLRMLVSRDMDCTSTLYIQFSFKFITKGVPERSHSVLLQYSVNGGISWLLLD
EFYFPTSTDTLFIHLPLPTSAQTNATRFRLWQPYNSGKKEEVWVIDDLIIDGSSLNNPPV
VSDSFEGGPQDYNWLFYPGGNTGLYCPYQKSGLEDDESAMVFVSSELGEHSITTRDIDVN
ENTVIQFEINVGCTADSSSSNPVRLEFSRDFGATWHLLVPLCSGGPQPSSLCSTELHPAS
VYYPGTTQGWRREVIHFGKLRLCGSIRFRWYQGFYSSGSSPPTWALDSVYIGPQCQDMCN
GHGSCVRGTHCVCDSGYSGPDCSQPDTSNPDFLKEDFEGGAVDADRFRLLSGGKPSRKCG
IMSSGNHLFFSEDGLRMLVTNDMDLSNARFIQFFLRLGCGKASPDPRSQPVLLQFSVDGA
LTWGLLQDFFFSNSSNQARLVALEIPLRARTSATRLRWWQPSENGHFYSPWVIDQVVVGG
SASGWGPLEDDFSSMDGRSWLLHPGGTRMPVCGSDGAAFAFIEKSNTRYAVTTDISLGQD
AFIQFDFSASCSVTNSCYAIELEYSLDLGLHWQPLVRDCLPTSQDCSSYTLQRLLVADIY
NKWGRVTLPIPTYARSAATRFRWFQQAPFDKQQTWALDNLYIGDGCSDMCSGHGRCQQSS
CVCDPEWEGEYCDEPVAPLPSQLKDSFSRAPSLSHWHLVTGGKLSTVCGAVASGAALHFS
GSCSRQLVTVDLNLTNAEFIQFYFMYGCMTPPSNRNQCVLLEFSLNGGINWILLTEIFYD
LYRKPGFVNVLLPHAARQEGVRVRWWQPTHEGSDHSDWALDNVLIAGSDPRAQISDTFGG
VALPNHERAPADGTPTGRIGLLNEGEEESTSGIYTGDLDETTTYTTTVSDHWLFSEDCAV
QRFCSSPDGVMVCGNDDGREVYAVTHDIVPDKGWVMQFKIVVGCSVPERHAEHQVHVQYS
VDFGVSWRYLVPQCLPADPCCGGQISQPSVFFPAQGWKRAVYPLKDSLADTAVRFRFYQQ
HSDTQWAVENFYIGPACDSHCGGHGECLDQRCICEPGFTGPSCYASTALKTSLKERFDWE
GLPGPQWQVLEGGRPCTDCGVLVEGTALYFAGADARQAVTADLDLRGAKFVEYWARIGSE
DNMTMCHRPTCRKEGVLLDYSKDGGVSWTLLHEMDYLKYVSVRRDYIVLPEGALSNTTRL
RWWQPFSVSSGLASPGLERAQWAVDNILVGGSDINPSTLLDTFDDEGVSHEESWSFYPNA
VRTAGFCGNPSFHLYWPNKNQDKTHNILATRELIVQPGYILQFKIVVGCEADSCEDHHSV
LLQYRKDARSDSWQLVQSECLPSSVNNVGCSPFMFHESTIYSPVNSSTWTRVTVQLPDHV
SSGATQFRWIQKEGVGERHGWGVDHMYIGEACPGLCSGHGYCTSGVVCICDEGHHGDDCS
LSGSDLPSSIKDNFESGSMSEESWQLIQGGGVGSGCGQLSPHAHGDSLYFNGCKMRQAVT
KPLDLTRASKIMFVLQIGSVSQTDSCNTALDQPDTVDRAVLLQYTVNNGVSWHVIAQHQP
KDFIKAQRVSYNIPLEARVKGVELRWWQPRHDGVGHDQWALDHVEVVLTRKQNYMMNFAR
QTGLRHYYSRKRRALLQHRA
NT seq 6543 nt   +upstreamnt  +downstreamnt
atggatctggggagccatttccccagactgctaaggagatgcccagtacgagtgaagtgg
tacaggaggtgcgttcagatggggcctgtctcccaggcagtggaggaggtgcccggtacg
agtgatgggatgcaagtggagagtgttgagagggatgtggcggaggggagtcaggggttt
gtggcccctgttgaggaggatatggatatggacatttttgatattcctattgatatgata
gctgctggcaacgactcaatttacaatctagatgaggagagtagtgtgtacagggacgct
ccagcctttgccctagatggagtctatatctctgaggcctgccccaaccactgtggagga
cacggagactgcatctctggggtctgcttttgtgacatgggatacacagttgagcaggac
agctgcgtgccagccgtggccagccccacagagctggcagagggctttgagagcaagctg
agcccggtttggcagaccctgagtggggggcaggttggagggggctgtggcaccatcagc
gagggaaaggctctgtacttcagcagctctgggaagagagaggcacgcactgtacctatg
gatacgacgaacacacggcttgtccagttctacatccgtattggagggaagaatgttgga
cccacctgcaccagacctcgctcccgcaacgaaggagtgatagtccagttctccaccaac
aacggggttcagtggcagttcctacgtgagctggactttggttccttcctggattcccag
gtggtcaccatcgagctgcctccacccgccaagactccctacactgtgttccgctggtgg
cagccacagcagggtaaacactcagcccagtgggctctggatgatgttctgatcggtata
aatgacagctccaggactggcttccatgataagtttgacgggacgtctcctctgagacac
aactggtaccgcatacagggaggagagatcactgtagactgtctgtctctggatacagct
ctgtccttcaacagcgacaccactgacaagaagccgcggtatgcagagagctgggacttt
gaggtgtccggctcctccttcctgcagtttgaactgtctatgggctgcagtaaggttgcc
acctcatcccacggtgtcaggctggagtactccacggactgtgggcgccactgggccctg
ctcaccccagagtgtgttccacctgccatcggctgtgccggctacaccatgagctcagtc
tacaccgctacacagtacaaccgctggaggagggttacggtgtacctgcccagcgctgcc
aattctcccaggactcggttcaggtggatccagccccacttcatccctggggcggacggt
tgggccttggacaacgtgctgctggcccctggctgcccctggatgtgctctggacacgga
ctctgtgacaacggatgctgtttgtgtgaccggggttatggcggggcccactgcgtgccc
ttggcccccctcccctccattttgagagacgacttcaacgagaacctggcggcggagcag
tggcccgaggtgtacggggctgagagggggactctcagtggggagcccctcaaatctggc
accgcactaatcttcaaaggggaaggtctgcgtatgttggtgtcaagggacatggactgc
accagcactctctacatccagttctccttcaagttcatcactaagggtgtcccagagcgc
tcccactcggtgctactacagtactctgtgaacggggggatcagttggctgttgttagat
gagttttacttccctacttccaccgatacgctgttcatccaccttcctctgcccaccagt
gcccagaccaacgctacccgcttcaggctctggcagccttacaacagcggtaaaaaagag
gaggtgtgggtgattgatgacctgatcatcgatggcagctcgctcaacaaccctcctgta
gtctctgacagctttgagggcggaccccaggattacaactggctcttctacccaggaggc
aacactggactctactgcccctaccagaagagtggcctggaggacgatgagtctgccatg
gtgtttgtctccagcgagttgggagaacattccattaccaccagagacattgatgtcaat
gaaaacaccgtcatacagtttgagatcaatgtgggctgcacggcagattcttcctcctct
aacccagtgagactggagttctccagggactttggggctacatggcatctcctggtgccc
ctgtgttcggggggcccccagccctcatccctatgctccacagagctgcaccccgccagc
gtctactaccccgggacaacacagggatggaggagggaggtcatccacttcggcaagctc
agactctgcggatccatccggttccgttggtaccagggcttctactctagcggttcatcc
ccccctacctgggctttggacagtgtgtacattggcccccagtgccaggacatgtgtaac
ggacacgggtcatgtgtgaggggtacacactgtgtgtgtgactcgggatactcaggacca
gactgctcccaacccgacacatccaaccctgacttcctcaaggaagactttgaaggaggg
gcggtggatgctgaccggtttaggctgctgagtggagggaaacctagcaggaaatgtggc
atcatgtccagtgggaaccacctgttcttcagcgaggacggccttcgcatgctggtcacc
aacgacatggacctttccaacgcaaggtttattcagttcttcctgcgtctgggctgtggt
aaggcctccccagacccccgctcccagcctgtcctgctccagttctctgtagacggggct
ctgacctggggcctgctgcaggacttcttcttctccaacagcagtaaccaggctcgcctc
gtggccctggagatccctctacgtgcccgtacctccgccacgcgcctacgctggtggcag
ccctctgagaatggacacttctatagtccatgggttattgaccaggtggtggtgggtggc
agtgccagtggctggggtcctttagaagacgacttctcctctatggacgggcgttcctgg
ctgctccaccccgggggtacccgcatgcccgtgtgtggttctgacggggcagccttcgct
ttcatagagaagtccaacacgcgctacgctgtcaccacagacatcagcctgggacaagat
gctttcatacagtttgatttctcagcttcatgctctgtcacaaactcctgctacgccatt
gagcttgagtattctctggacctgggtctgcactggcagcctctggtgcgtgactgtctc
cccaccagtcaagactgctcctcctacaccctacagagactgctggtggcagacatatac
aacaagtggggccgagtcactctgcccattcccacctacgccaggtctgcagctacgcgg
ttccgttggttccagcaggctccatttgacaagcagcagacctgggctctggacaacctc
tacatcggcgacggctgctccgacatgtgctccggacatggacgctgccagcagagctcc
tgtgtgtgtgacccagagtgggaaggcgagtactgtgatgagcctgtggcccccctgccc
tcccagctgaaggacagtttcagccgggccccctctcttagccactggcacctggtaacc
gggggaaagctcagcactgtgtgtggggccgtggcatctggggctgcactgcacttcagc
gggagttgcagtcgtcagctggtgacggtggatctgaacctgaccaacgcagagttcatc
cagttctactttatgtatggctgcatgaccccgccgagcaaccgcaaccagtgtgtacta
ctggagttcagtctgaatggtggaatcaactggatcctgttgacagagatcttttacgac
ctgtacagaaagcctggattcgtcaatgtactgctgccccatgcggcccgtcaggagggt
gtgcgtgtgcgctggtggcaaccgacccacgaggggtccgaccacagtgactgggcactg
gataacgtcctaatcgctggttccgacccacgggcacagatctctgacaccttcggaggg
gtggcgctgcctaaccacgagagagcgcccgctgatggtacccccacgggcaggataggc
ctgttgaatgagggagaggaggagagcacctcaggtatatacacaggggatctggacgag
accacaacatacaccaccacagtgagtgatcactggctgttcagtgaggactgtgcggtt
cagaggttctgtagctctccagatggagtcatggtgtgtggtaatgatgacggcagagag
gtgtatgcagtcacacatgacatcgtcccggacaaaggctgggtcatgcagttcaagatt
gtggtgggctgcagtgtgccggagcgccatgccgagcatcaggtccatgtccagtattct
gtggactttggtgtctcctggagatacctggtgccccagtgtctccctgctgacccctgc
tgtggaggacagatctcccagcccagtgtcttcttccctgcccagggttggaaaagggcc
gtctaccccctaaaggacagcctggcagacacggcggtgcgtttccggttctaccagcag
cacagtgatacccagtgggcagtggagaacttctacattgggccagcgtgtgacagccat
tgtgggggacatggagagtgtctggaccagcgatgtatctgtgaaccaggcttcaccgga
cccagctgctacgccagcactgcactcaagacatctctgaaggagcgttttgactgggag
gggctgccgggccctcagtggcaggtgttggaggggggtcgcccctgcactgattgtggg
gttctggtggaggggaccgctttgtactttgcaggagcagacgccaggcaggccgtcacc
gctgacctcgacctcagaggagccaagtttgtagagtactgggccaggataggaagtgaa
gacaacatgaccatgtgccatcgccctacctgtcgcaaagagggagtgctcctggactac
tccaaagacggaggtgtgtcctggaccctgcttcatgagatggactatctgaagtacgtg
tctgtgaggcgtgattacattgttttaccagagggggcgctgtctaacaccacacggctg
cggtggtggcagcccttctctgtctcctccggtctggcatcacccgggctggagcgtgct
cagtgggctgtagacaacatcctggtgggagggtctgacatcaacccctccaccctgctc
gacaccttcgatgacgagggtgtgtcccatgaggagagctggagcttctatcccaacgcg
gtgcgtacggctggattttgtggcaacccatccttccacctctactggcccaacaagaac
caggacaaaacacacaacatcctagccacccgagagcttatagtacagcctggatacatc
ctacagttcaagattgtggtgggctgtgaggcagacagctgtgaagaccaccattctgtc
ctgctgcagtacaggaaggatgccaggtctgactcatggcagctggtccagtcagagtgt
cttccctcctctgtgaacaacgtgggctgctctcccttcatgttccatgaatctaccatc
tacagtcctgtcaacagctctacctggaccagagtcactgtccagctgcctgaccacgtc
tcctcaggtgccacgcagttccgttggatccagaaggagggcgttggcgagcgtcacggc
tggggggtggaccacatgtacattggggaggcgtgcccagggctgtgtagtggtcatggt
tactgtactagcggagtggtctgtatctgtgacgagggacaccatggtgatgactgctcc
ctgtccggcagtgacctacccagctccataaaggataactttgagtcaggcagcatgtca
gaggagagctggcaactcatccagggtggcggggtgggaagtgggtgtggtcagctctct
ccccacgcccacggtgactcgctctacttcaacggttgtaagatgaggcaggctgtcacc
aagccactcgacctgacacgagccagtaagatcatgttcgtcctgcagataggtagtgtg
tcccagacagacagttgtaacacagccctggaccagcctgacacagtggacagagctgtg
ctgctacagtacactgtcaataatggagttagctggcacgtgatcgcccagcaccagccc
aaagacttcatcaaggcccagagagtgtcctacaacatcccactagaggcgagagttaaa
ggggtggagctgcggtggtggcagccgcgtcacgacggtgtgggacatgaccagtgggcg
ctggaccatgtggaagtagttctcactcgtaaacaaaactatatgatgaactttgccaga
cagaccggcctacgccactactacagccggaagaggcgggcactgctacaacatcgtgcc
taa

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