Salvelinus namaycush (lake trout): 120053351
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Entry
120053351 CDS
T07522
Name
(RefSeq) transcription factor HES-1-like
KO
K06054
hairy and enhancer of split 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03460
Fanconi anemia pathway
snh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120053351
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120053351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120053351
03400 DNA repair and recombination proteins [BR:
snh03400
]
120053351
Transcription factors [BR:
snh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
120053351
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
120053351
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
120053351
NCBI-ProteinID:
XP_038856403
UniProt:
A0A8U1BV51
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Position
Sna9:8762030..8764008
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AA seq
267 aa
AA seq
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MPADILEKTSVSPVAATAASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALNSDPTVLGKYRAGFRECTNE
VTRFLSTCEGVNTEVRTRLLGHLASCMTQINAMNYPTQHQIPTGPPHRAFGQSMVHIPNS
SPQGNVMPQPCKGGSPRSMSPETTKVYGGFHLVPATDGQFAFLIPNAAFTPNGPVIPVYA
NQVNTPVPAAVSPGAPTGNSDSVWRPW
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgatatactggaaaagacatcagtctctcctgttgctgctactgcagctagc
atgaacacgacacctgataaacccaagacggcttccgagcacaggaagtcatccaaacct
atcatggagaaaaggagaagagccagaatcaacgaaagcttgggacagttgaaaacactt
atcctggatgcgctcaaaaaagatagttccagacactcgaaacttgaaaaggcggacatc
ctggagatgaccgtgaaacatctccggaacctccagagagctcaaatgactgctgctttg
aactctgatcccaccgtgctagggaaatacagagctggattccgcgagtgcacaaatgaa
gtcacccggttcctgtccacctgcgaaggggttaacaccgaggtcaggacgcggcttctc
ggtcacttggccagctgcatgacgcagataaacgctatgaactaccccacgcagcaccag
atccctaccgggcctccccaccgcgccttcggccagtccatggtacatatccccaactca
tctccgcagggcaacgtgatgccccagccttgtaaaggtggctctccccggagcatgtca
ccagaaacaacaaaagtatacggcggcttccacctcgtacctgccacagatggacaattc
gccttccttatccccaatgcagcttttacgcccaacggtcccgttatccccgtgtacgcg
aaccaggtcaacacgcctgtcccagcggcggtgtcccccggtgcaccgacaggcaactcg
gactcagtgtggcgaccctggtag
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