Salvelinus namaycush (lake trout): 120053364
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Entry
120053364 CDS
T07522
Symbol
wdr59
Name
(RefSeq) LOW QUALITY PROTEIN: GATOR complex protein WDR59
KO
K20409
SEA/GATOR complex protein SEA3/WDR59
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
120053364 (wdr59)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120053364 (wdr59)
Membrane trafficking [BR:
snh04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
120053364 (wdr59)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_Aladin
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
eIF2A
WD_LRWD1
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_Nup120_160
RWD
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
120053364
NCBI-ProteinID:
XP_038856418
UniProt:
A0A8U1BV61
LinkDB
All DBs
Position
Sna1:complement(83574066..83625753)
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AA seq
547 aa
AA seq
DB search
MAARWSSETVVVELRDAQATAMSVDCLGRHAVLSGRRFLYVVNLETPSEAPRKIGRPSKW
DVGTVQWNPHKAESHVFAASXSNQRVDLYTWRDGGGEGPHASLQGHTRVISDLDWSCFEP
EYLVTSSVDTYICIWDTRDTRKPTVALSAVAGASQVKWNKRNQYLLASSHDGDVRIWDKR
VSTILXHYVAAHLSKIHGLDWHPDNEYILATSSQDNSVRFWDYRQPRKYLNILSCQVPVW
KARYTPFSNGLVTVMVPQLRRENSLLLWSALDLASPVHAFVGHDDVVLEFQWRPQKEASK
DYQMVTLSRDQTLRIWRLDPQLQKLCANDLVEDVIEGISLTTDSEKSLPSQDPEPSVHSS
GLPAENLQDQAGALTSGGRHDPTALPQTLQQEFSLVNLQIRNVNVEMDAVNRSCVVSAVF
GTNQVHLVGKFPSHYPNNAAPSFQFISPTTIPTAMRTKIQKVLTDTSLQKVKRNQNCLEP
CVRQLVSCLESYMVRHILNTFLKNPQIALHQEGFKHFKGLGHSWTMFPLSCSLPCISCTE
MQEMELH
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcgctggagtagtgagactgtggtcgtggaattgcgagacgcgcaggccact
gctatgtccgtggactgcctgggtcgacatgctgtcctgtctggacggaggtttctgtat
gtggtgaacctggagactccgtctgaagctcccaggaagattggcagaccgagcaaatgg
gacgtggggacggttcagtggaatcctcacaaggcggagtcccacgtcttcgctgcctca
tgaagtaaccagcgtgtagacctgtacacgtggcgtgatggcggtggggagggaccgcac
gcgtccctgcagggacacacacgagtcatcagtgacttggactggtcctgttttgaaccg
gagtatctagtcaccagctctgtagacacctacatctgtatctgggacaccagagacaca
aggaaaccaacagtggcgttatctgcagtggcgggggcgtcccaggtcaagtggaacaaa
cgtaatcagtaccttctagcctccagtcatgatggagatgttcgcatctgggacaagagg
gtcagtactatattataacattacgtggcagctcacctgtctaagatccatggtctggac
tggcaccctgacaacgaatacatcctggcaacgtccagtcaggacaactcagtccggttc
tgggactacagacagccgaggaagtatctgaacatcctgtcctgtcaggttccagtgtgg
aaggccagatatactcctttctccaatggcctggttacagtgatggttccccagctgaga
cgtgagaacagcttgttgctatggagcgctctggacctcgccagccccgttcacgccttc
gtgggacacgatgacgtggtgctggagttccagtggcgtccgcagaaagaggcttctaag
gactaccagatggtgactttgtccagagaccagactctgagaatatggaggctggatcct
cagctacagaagctgtgtgccaacgacctggtggaggatgtgatagagggaatcagcctt
actaccgattcagagaagagccttccctctcaggaccctgaacccagcgtacacagctct
ggcctgccagctgaaaacctgcaggaccaggctggtgctctgacctctggtggtagacac
gaccccactgctctgccccagacactgcaacaggagttctctctggtcaacctgcagatc
aggaacgtcaacgtggagatggatgcggtgaaccgtagctgcgtggtgtccgccgtgttc
gggaccaaccaggttcacctggtggggaagttcccctcccactaccccaacaacgctgct
ccttccttccagttcatctcccctaccaccatccccaccgccatgaggaccaagatacag
aaggtcctgactgacacgtcactgcagaaggtcaagaggaatcagaactgtctggagccc
tgcgttagacagctggtgtcctgtctagagtcgtacatggtgagacacattttaaatact
tttttaaaaaatccgcaaatcgcattacatcaagaaggattcaaacatttcaaaggtctt
ggacactcgtggacaatgttccctctaagctgctctctgccgtgcatctcctgcacagag
atgcaagagatggaacttcactga
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