Salvelinus namaycush (lake trout): 120053491
Help
Entry
120053491 CDS
T07522
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120053491
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120053491
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
NGL family
120053491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
Mid2
DUF7617
Sp38
Ig_6
DUF4293
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
120053491
NCBI-ProteinID:
XP_038856545
UniProt:
A0A8U1EMQ0
LinkDB
All DBs
Position
Sna9:37614993..37616930
Genome browser
AA seq
645 aa
AA seq
DB search
MLNKMTSSRQQQTMRGPRWNRALSDPLFVLLLALQLLAVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLREVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLGNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLTVIRPGSF
KGLIHLQKLWMMHAQIKTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPASHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRASSLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENVLSYFTTVTVETIEPVHDEGRSTVWQKVGPTP
SAGSWETVSSTSTTTTTARTPLSTRATEKTFTIPVTDLSDSSMTGLDEVMKTTKIIIGCF
VAITLMAAVMLIIFYKMRKQHHQQNHHAPQRTIEIINVDEDCVTGGPAMEGHLTLPPLEH
EHLNHYNTYKSAYNHVSTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgacctcttctcggcagcagcagacgatgagaggtcctaggtggaac
cgggccctgtccgaccctttgtttgtgctgctcctagccctccagctcctggcggtggcg
ggcctggtgcgtgctcagacctgcccctctgtctgctcctgcagcaaccagttcagcaag
gtgatctgcacgcggcgggggctccgtgaggtccccgacggcatctccaccaacacacgc
tacctgaacctgcaggagaacctcatccaggtgatcaaggtggacagcttcaagcacctg
cggcacctggagatcctgcagctgagcaagaaccacatccgaaacattgagattggggcc
ttcaacggcctggccagtctcaacaccctggagttgtttgacaaccgcctcaccacaatc
cccaatggggcctttgagtacctctccaagctcaaggagctgtggctgaggaacaacccc
atcgagagcattccctcgtatgcgttcaacagggtgccctcgctacggaggctggattta
ggggaactcaaacgcctctcgtatatctcagagggggctttcgagggcctcggcaacctg
cgctacctgaacctgggcatgtgcaatctgaaggagatccccaacctcatcccactggtc
aagctggacgagctagagatgtcagggaaccagctgacggtcatcagacctggctccttc
aaagggttgatccacctgcagaagctgtggatgatgcatgcccagatcaaaaccattgaa
aggaactcctttgacgacctgcagtcgctggtggagctcaacctggcccacaacaacctc
accctgctgccccacgatctcttcacccccctgcaccacctggagagagtccatctccat
cacaacccctggaactgcaactgtgacatcctgtggctcagctggtggctcaaagagatg
gtgccggccaacaccagctgctgcgcccgctgcagttccccagccagccacaagggacgc
tacataggtgagctggaccagaactatttccactgttacgcacctgttattgtggagcca
ccagcggacctgaacgtgacggagggtatggctgcagagctgaagtgcagggccagctct
ctgacctcagtcagttggattacgcccaatggctccatcatgacccacggtgcgtacaag
atccgcatttctgtgctcaacgatggtacgctcaacttcaccaacgtcaccatgcaggac
acgggaacctacacctgcatggtaagcaactcagcaggcaataccacagcatctgccact
ctcaacgtgtcttccacagagaacgtcctcagctactttaccacagtaacagtggagacc
atcgagccagtgcacgacgaggggcgctccaccgtgtggcagaaggtgggccccaccccc
tcagccggatcctgggagactgtgtcgtccacctccaccaccaccacaacggcccggacg
cccctctccacccgggccacagagaagacctttaccatccctgtcacggacctgagcgac
agctccatgaccggcctggatgaggtgatgaagaccaccaaaatcatcatcggctgcttc
gtggccatcacactcatggccgccgttatgctaatcatcttctacaagatgaggaagcag
caccaccagcagaaccaccatgcgccacagcgcaccatcgagatcatcaacgtagacgag
gactgtgtgacaggcgggccggccatggagggccacctaactctgcccccgctggagcat
gagcacctgaaccactacaacacctataagtctgcgtacaaccacgtctccactatcaac
tccatacacagctcggcgcacgaacctttgttaattcgggccagttcgaaagacaatgta
caagagacccagatctaa
DBGET
integrated database retrieval system
