Salvelinus namaycush (lake trout): 120053500
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Entry
120053500 CDS
T07522
Name
(RefSeq) transcription factor RFX4
KO
K09174
regulatory factor X 4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120053500
Transcription factors [BR:
snh03000
]
Eukaryotic type
Other basic domains
RF-X
120053500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
120053500
NCBI-ProteinID:
XP_038856558
UniProt:
A0A8U1EKM1
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Position
Sna9:complement(40807830..40834901)
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AA seq
736 aa
AA seq
DB search
MHCGLLEEPDMDSTESWIERCLNENESKRYSSHTSLGNTSNDENEEKENNRASKPHSTPA
TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKHDTQPVNAASFGKIIRQQFPQLTTRRLG
TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPD
FPNVKDLNLPASLSEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHD
LPENLRNIKFELSRRFSQVLKRQTSLNHLCQASRTVIHSADITFQMMEDWRNVDLNSITK
QTLYTMEDTREEQRRLIIHLYQEFDRLLEEQSPIEAYIEWLDSMVDRCVVKVAGKRPGCL
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANEL
MRSMKAEGNTAEQEEEMMLTETTPTSTSPGPFSPAKSVTSVGVPAASSPAAAQSPEYTGA
TATTGAVQSYTWSLTYTVTTSGGTPSEGGQQQPCMRSGAPVPPPSSAHRLPVYAHRDEHG
FTGSYNYGSYSNQHPHSIQSQYPSLAHEPGIPAPLHYPAYHRTSAQYPLNSQMSRMEPCL
MGGTPRLHPTPVTPRWADVSPANSCYTSSPIHSSRYAASGDMYSPLAPRRNSEYEHSQHF
PGFAYINGEATTGWAK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgggctgctggaggagcctgatatggattccacagagagctggattgaaaga
tgtctcaacgagaacgagagcaagcggtattccagtcacacgtccctggggaatacgtcc
aatgacgaaaatgaggagaaagaaaacaacagggcatctaaaccacattcaacaccagct
accctacaatggctggaggagaactatgagattgcagaaggggtttgtatcccccgcagt
gctctctacatgcactacctggacttctgtgagaagcacgacacacagcctgtcaacgcc
gccagctttgggaagattattagacaacagtttccacaactaaccacaagaagactgggg
actaggggacagtcaaagtaccactactatggcatcgctgtgaaggagagttcccagtac
tacgatgtgatgtactccaagaagggggcggcgtgggtgaacgagacgggcaagaaggag
gtcaccaagcaaacagtggcgtattcaccacgctccaaactggggacgctcctgccagac
tttccaaatgtcaaagacctaaatctgcccgccagtctgtcagaagagaaggtgtcaacg
ttcatcatgatgtacagaactcactgccagaggatactggatacagtaatacgcgcaaac
tttgacgaggtccagagcttcctgctgcacttttggcagggcatgcccccgcacatgctc
cctgtcctgggctcctccactgtggtcaacattgtgggcgtctgtgactccattctttac
aaggcaatctctggggttctcatgcccacagtccttcaagcactgcctgatagtttgacc
caggtgatccggaagtttgccaaacagctggatgagtggcttaaagtagcacttcacgac
ctgcctgaaaacctgaggaatatcaagttcgaattatctagaagattttctcaggttctc
aagcggcagacatctttgaaccatctatgtcaggcgtcgcggacggtgatccacagtgca
gacatcacctttcagatgatggaggactggaggaacgtggacctgaacagcatcaccaag
cagacactttacaccatggaggacacacgggaggagcaacggcggctcatcatccacttg
taccaggagtttgaccgtctgttggaggagcagtctcctatagaggcctacatagagtgg
ctggactccatggtggaccgctgtgttgtcaaggtggcagggaagaggcctgggtgcctg
aagaaggtggcccagcagttcctgctcatgtggtcgtgcttcgggacacgagtcatccgg
gatatgaccctccacagtgcgcctagcttcggctcgttccacctgatccacctgatgttt
gatgactatgtgctgtacctgctggagtccctgcactgccaggagagggccaatgagctc
atgaggtccatgaaggcagagggcaacacagctgagcaagaggaagagatgatgctgacg
gagaccacgcccacatccacgtccccagggcccttctccccggccaagtctgtcacctca
gtgggggtcccagccgccagctcccccgctgctgcccagtccccagagtacacaggggcc
acagccaccacaggagctgttcagtcatatacctggtcccttacgtacacagtgacaacg
tcaggcggcaccccttctgagggcggacagcagcagccttgcatgcgcagtggtgcccca
gtgccccctccctcctccgcccatcgactgccagtctacgcacacagggatgagcacggg
ttcactgggagctataactacggaagctactccaaccagcacccccactccatccagagc
cagtaccccagtctggcccatgaaccgggcattcctgcccccctccattatcccgcctac
caccgcacttctgcacagtacccactcaacagccagatgtcacggatggagccctgcttg
atgggaggtactcctcggctgcaccctacgcctgtgaccccccggtgggctgatgtctca
ccggccaacagctgttacaccagttcccctatacactcctcccgctacgccgcctctgga
gacatgtactcccccctggcccctcgcaggaactctgagtatgaacactctcaacacttt
cccggtttcgcctacatcaacggagaggccactacaggctgggccaagtag
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