Salvelinus namaycush (lake trout): 120053538
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Entry
120053538 CDS
T07522
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120053538
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120053538
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
120053538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
120053538
NCBI-ProteinID:
XP_038856600
UniProt:
A0A8U1BHV4
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Position
9:complement(51630558..51751328)
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AA seq
772 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGKDLSKASHDEAVEAFRSAKDPIVVQVLRRNTASR
GGHVGSTQEVGVVDVVDMCTQTDITFEHIMALAKLRATTPPVPDICPFLLSDSCHSLHTM
EQDYYEGRADGGRTEEFEYEEVELCRLNSQEKLGLTLCYRTDEEEDMAIYVSEVGPNSIA
ARDGRIREGDHILQINGQDVQDREEAVAVLSSEDTRNIILLVARPEIQLEEAWLDDEHSE
FLEQLKMEMLEEQQREEMELEALQEEQEQPRGTEEDDITATCSSLTQDKDSELGMSDHNA
LLTHIQRRLSQCLRDRQDTGHHRLEEEEEEEELEVDGDRFQQLLELKCQIRNSGEYDLFY
SRHSTIECSLGEPAGGVQRELRMLNEELCSIELECQNIMQAHKLRKGPGGTQRDQVQQVS
PITGRPVPKDQNFLRGSRDSPSRGKLADINKRQEKPEKSDKDSSSAYNTAESSRSTPLAM
DRSPEHSLQRRMVTITNQRNLRSSLASLHATASPSPSPSPTQRPNRYESDQTAPADDERS
GNGKVTPQHPPRASQIPYLSPSRSSQHRQPNTNIPAHARHYQSYMQLIQQRSAVEYAQSQ
LSLLSVVKEPQLIPANEPKMEWKVKIRSDGTRYITKRPIRDKILRERALKIKEERSGGMT
TDDDAMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMQQSRLESLRESPQSSSEGRKEVS
IIELSHRKMMKKRNKKILDNWMTIQELMTHGAKAPDDPRAKVHNAFLSVTTV
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatctgtgcactttacagaaacgagaggaacactataagctgctgtatgag
atcgcacaggtgaatggaaaggacctctccaaggccagtcatgacgaggcagtggaggcg
ttccgctctgctaaggaccccattgtggtgcaggtcctcaggaggaacactgctagccgc
ggcggccatgttggctccactcaggaagtgggcgtggtggacgtggtggacatgtgcacg
cagacagacatcaccttcgaacatatcatggccctggccaagctccgagccaccactcct
cccgtgcctgacatctgccccttcctgctgtctgacagctgtcactctctccacaccatg
gaacaggattactatgaggggagagctgatggagggaggacagaggagtttgagtatgag
gaggtggagctgtgtcgactgaacagtcaggagaagctgggcctgacgttgtgctacagg
acagacgaggaggaggacatggctatctatgtcagtgaggttgggccaaacagcatcgct
gcaagggacggacgcatcagagaaggagaccacattttacagatcaatggtcaggatgtg
caggacagagaggaggctgtagctgtgctctccagtgaagacacaaggaacatcatactg
ctggtcgccaggcccgagatacagctagaggaggcgtggttggatgatgaacacagtgag
ttcctggagcagttgaagatggagatgttggaggagcagcagagagaggagatggagctg
gaagcactacaggaggaacaggagcagcccagaggaacagaagaggatgacatcactgct
acctgttcctccctaactcaggacaaggacagtgagttggggatgtctgaccacaatgcc
cttctaacccacatccagagacgactgtcccagtgcctgagggatagacaggacactggg
catcatcgtctggaagaagaagaggaggaagaggagttggaggtggacggtgaccgcttc
cagcagctcctggagctgaagtgtcagatccgtaacagcggggagtacgacctgttctac
agcagacacagcaccatcgagtgtagtctgggagagccggctggcggcgtgcagcgtgag
ctccgcatgctcaacgaggagctctgcagcattgagcttgagtgccagaacatcatgcag
gcccacaagctccgcaagggcccgggggggacccagagagaccaggtgcagcaggtgtct
cccataaccggccgccccgtgcccaaggaccaaaacttcctccgaggcagcagggactcg
cccagcaggggcaagctggctgacatcaacaagcgccaagagaaaccggagaagtcagac
aaggacagctcgagcgcctacaacacggcagagagctcgcgcagcacgccgctggccatg
gaccgctcccccgagcactccctccagaggaggatggtcaccatcaccaaccagaggaac
ctccgcagtagcctggcaagccttcatgccacagccagccccagtcctagccccagccca
acacaacgccccaaccgctacgagtcggaccagactgccccggcagacgatgaaaggagc
gggaacgggaaagtgacgcctcagcatcctcccagggcttcccagatcccttacctctcc
ccgtcccgtagctcccagcaccgccagcccaacaccaacatcccggcccacgctcgccac
taccagagctacatgcagctgatccagcagcgctcggccgtggagtacgctcagagccag
ctcagcctgctcagcgtggtcaaggagccccagttgatccccgccaacgagcccaagatg
gagtggaaggtgaagatccgttcggacggcacgcgctacatcacaaagagacccatcagg
gacaagatcctgcgggaacgcgccctcaagatcaaggaggagcgcagcggcgggatgacc
acggacgacgacgctatgtctgagatgaagatggggcggtactggagtaaagaggagagg
aagcagcatctggtcagggctaaagaacagcggaggaggcgggagttcatgcagcagagc
aggctggagagcctgagggagagtcctcagagcagcagcgaaggacgcaaggaggtcagc
atcatcgaactgagccacaggaagatgatgaagaagcgcaacaagaagatcctggacaac
tggatgaccattcaggaactgatgactcacggggccaaagcccctgatgaccccagggcc
aaagtacataatgccttcctatcggtcaccactgtataa
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